prot_L-elsbetiae_contig7601.16521.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7601.16521.1
Unique Nameprot_L-elsbetiae_contig7601.16521.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length204
Homology
BLAST of mRNA_L-elsbetiae_contig7601.16521.1 vs. uniprot
Match: D8LI97_ECTSI (Transmembrane protein 18 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI97_ECTSI)

HSP 1 Score: 317 bits (811), Expect = 6.610e-108
Identity = 166/203 (81.77%), Postives = 180/203 (88.67%), Query Frame = 0
Query:    1 MASAAEDVGDRASDSLGEGDTADKLEQHGEAFTGFLGDVQASLLTQLNAQSVGPEGFVENFQAFRSAVDWSEPWIQGILVFHLSLWLFFIVTRKSFGAQVGLFTVILGGTRSSELINTFLRDRWHEFSRQNYFDEHGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVAVKTQQFKREIAAKKEGGKSKAKRGLKDKKASKQA 203
            MA+ AE V    ++ LGE   A+K EQHG+AFTGFLGDVQA+LL+QLNA SVGPEGFVENFQAFRSAVDWSEPWIQGILVFHL LW+FFIVTR+SFGAQVGLF V+L GTR SE INT LRDRW  FSRQNYFDEHGIFMGVMWAGPLL+LGFTMLV+LLCQ ASLLV VKT+QFKREIAAKK+GGKSKAKRG KDKKASKQA
Sbjct:    1 MATVAEKVDQAIAEGLGEEALAEKFEQHGDAFTGFLGDVQANLLSQLNAHSVGPEGFVENFQAFRSAVDWSEPWIQGILVFHLLLWVFFIVTRRSFGAQVGLFAVVLTGTRLSEFINTCLRDRWQNFSRQNYFDEHGIFMGVMWAGPLLILGFTMLVSLLCQTASLLVTVKTKQFKREIAAKKDGGKSKAKRGAKDKKASKQA 203          
BLAST of mRNA_L-elsbetiae_contig7601.16521.1 vs. uniprot
Match: A0A835ZFQ2_9STRA (Transmembrane protein 18 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFQ2_9STRA)

HSP 1 Score: 132 bits (332), Expect = 8.830e-36
Identity = 68/149 (45.64%), Postives = 97/149 (65.10%), Query Frame = 0
Query:   35 FLGDVQASLLTQLNAQSVGPEGFVENFQAFRSAVDWSEPWIQGILVFHLSLWLFFIVTRKSFGAQVGLFTVILGGTRSSELINTFLRDRWHEFSRQNYFDEHGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVAVKTQQFKREIAAKK 183
            F+  ++A++L Q      GP+GF+EN QAF +AVDWSE WIQ IL FH+++    +++R     Q+ LF  I    R +E  N +   RW +F+RQNYFDE G+F+GV+W  PLLL+   ML+  + ++A LLV VK  Q +REIAA+K
Sbjct:   12 FIASLEANML-QAAKSGPGPQGFIENCQAFCAAVDWSETWIQAILCFHVAVAAAALLSRNRLNCQIALFLSICALVRGAEWANAYAARRWRDFARQNYFDERGVFVGVVWCAPLLLVLLGMLLGFVVRSARLLVTVKRAQLRREIAARK 159          
BLAST of mRNA_L-elsbetiae_contig7601.16521.1 vs. uniprot
Match: A0A7S2Y0G5_9STRA (Transmembrane protein 18 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0G5_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.210e-35
Identity = 67/145 (46.21%), Postives = 95/145 (65.52%), Query Frame = 0
Query:   35 FLGDVQASLLTQLNAQSVGPEGFVENFQAFRSAVDWSEPWIQGILVFHLSLWLFFIVTRKSFGAQVGLFTVILGGTRSSELINTFLRDRWHEFSRQNYFDEHGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVAVKTQQFKREI 179
             +  ++  +L        GPEGF EN +AF++AV+W E WIQGIL FH+ +++  +V RK+F  QV +F +I+G    SE INT  ++ W EFS Q+YFD +G+FM VM+AGPLLL+GF  L N L  +A LLV VK  + K+ +
Sbjct:   52 MIASLEDQVLQMARESGAGPEGFWENVEAFKAAVNWEERWIQGILAFHVIVFVLMLVFRKNFNVQVCIFLLIVGLVSCSETINTLGQNHWQEFSTQDYFDPNGLFMMVMFAGPLLLIGFLQLFNFLLISADLLVKVKRAELKKHM 196          
BLAST of mRNA_L-elsbetiae_contig7601.16521.1 vs. uniprot
Match: A0A7S4A3H0_9STRA (Transmembrane protein 18 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3H0_9STRA)

HSP 1 Score: 124 bits (311), Expect = 5.240e-32
Identity = 72/168 (42.86%), Postives = 97/168 (57.74%), Query Frame = 0
Query:   22 ADKLEQHGEAFTGFLGDVQASLLTQLNAQSV--GPEGFVENFQAFRSAVDWSEPWIQGILVFHLSLWLFFIVTRKSFGAQVGLFTVILGGTRSSELINTFLRDRWHEFSRQNYFDEHGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVAVKTQQFK---REIAAKKE 184
            AD ++         L DV   L  Q+ A  V   P+ F E   AF +AVDW E WI+ +L++HLSLW+ F+ TRK+F  Q GLF  I      +E +N     RW +F+ QNYFDE G+F G+M   PLL L F ML+N L  A+S+LV VK  +F+   RE+ A+ E
Sbjct:   17 ADDVDNENATAASSLNDVVEGLKDQIFADHVKGAPQTFREECAAFIAAVDWRENWIRCLLLWHLSLWVLFVFTRKNFPVQCGLFFGIAACVALAETLNGLCAKRWEKFATQNYFDERGVFAGIMLCAPLLALAFAMLLNFLVMASSMLVTVKRAEFRGKARELGAQAE 184          
BLAST of mRNA_L-elsbetiae_contig7601.16521.1 vs. uniprot
Match: A0A7S2SGF8_9STRA (Transmembrane protein 18 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGF8_9STRA)

HSP 1 Score: 117 bits (294), Expect = 8.200e-30
Identity = 58/144 (40.28%), Postives = 88/144 (61.11%), Query Frame = 0
Query:   35 FLGDVQASLLTQLNAQSVGPEGFVENFQAFRSAVDWSEPWIQGILVFHLSLWLFFIVTRKSFGAQVGLFTVILGGTRSSELINTFLRDRWHEFSRQNYFDEHGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVAVKTQQFKRE 178
             +  +Q  + T        P G +++ QAF +AVDWSE WIQ +L FH++LW+  + TR+    Q G F  + G   S+E +NT+    W +FS+Q+YF  +G F+GVM+A PLL L    ++N LC AA+LLV VK ++ +R+
Sbjct:   30 IIESLQEQVYTMAREAGNAPSGLLDDIQAFTAAVDWSERWIQALLGFHVALWMITLWTRRYIWWQCGTFFAVCGLVWSAEPMNTWAAAHWQDFSKQDYFQPNGFFVGVMYAAPLLALAMFQMINFLCIAANLLVEVKRKELRRK 173          
BLAST of mRNA_L-elsbetiae_contig7601.16521.1 vs. uniprot
Match: A0A7S2CTX0_9STRA (Transmembrane protein 18 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CTX0_9STRA)

HSP 1 Score: 114 bits (284), Expect = 2.570e-28
Identity = 60/149 (40.27%), Postives = 88/149 (59.06%), Query Frame = 0
Query:   35 FLGDVQASLLTQLNAQSVGPEGFVENFQAFRSAVDWSEPWIQGILVFHLSLWLFFIVTRKSFGAQVGLFTVILGGTRSSELINTFLRDRWHEFSRQNYFDEHGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVAVKTQQFKREIAAKK 183
            F+G ++  +          P+ F E+ QAF +AVDW+E WIQG+L+ H  LW+  +  R+ F  QV +F ++     SSE IN+    RW  FS Q+YFD  G F+ VM+AGPLL L    ++N L  +A++LV VK  + K  +A+KK
Sbjct:   29 FIGGLEEQVYAMAREAGNAPKNFTEDVQAFIAAVDWNEKWIQGLLLGHFLLWVITLGFRRRFYLQVFIFFMVCAMVWSSEHINSAAHVRWQSFSTQDYFDPSGFFISVMFAGPLLALALFQMINFLIISANMLVEVKRNELKTNLASKK 177          
BLAST of mRNA_L-elsbetiae_contig7601.16521.1 vs. uniprot
Match: A0A837A383_9ROSI (Transmembrane protein 18 n=4 Tax=Salix TaxID=40685 RepID=A0A837A383_9ROSI)

HSP 1 Score: 110 bits (275), Expect = 3.600e-27
Identity = 55/140 (39.29%), Postives = 83/140 (59.29%), Query Frame = 0
Query:   38 DVQASLLTQLNAQ-SVGPEGFVENFQAFRSAVDWSEPWIQGILVFHLSLWLFFIVTRKSFGAQVGLFTVILGGTRSSELINTFLRDRWHEFSRQNYFDEHGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVAVKTQQFK 176
            D  A L+ +L+++   G +  ++NF  F  A+DW EPWI G+  FHL L +  IV+RK    Q+ LF + L G   SE +N  L D W  F+ QNYFD HG+F+ V+W+GPLL++   +L+N L     ++V  K  + +
Sbjct:   13 DQMADLVQKLSSELRSGIKPSIDNFVGFFHAIDWKEPWIMGLTGFHLLLLILTIVSRKHINFQMSLFLLALAGVYLSERLNRVLSDNWRSFASQNYFDPHGVFLSVLWSGPLLIIAIIILINTLFSLCYMIVRWKRAELR 152          
BLAST of mRNA_L-elsbetiae_contig7601.16521.1 vs. uniprot
Match: U5FW19_POPTR (Transmembrane protein 18 n=8 Tax=Populus TaxID=3689 RepID=U5FW19_POPTR)

HSP 1 Score: 108 bits (271), Expect = 1.430e-26
Identity = 53/140 (37.86%), Postives = 84/140 (60.00%), Query Frame = 0
Query:   38 DVQASLLTQLNAQ-SVGPEGFVENFQAFRSAVDWSEPWIQGILVFHLSLWLFFIVTRKSFGAQVGLFTVILGGTRSSELINTFLRDRWHEFSRQNYFDEHGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVAVKTQQFK 176
            D  A L+ +L+++   G    ++NF  F  A+DW+EPW+ G++ FHL+L +  +V+RK    Q+  F V L G   SE +N  L D W  F+ QNYFD HG+F+ V+W+GPLL++   +L+N L     ++V  K  + +
Sbjct:   13 DQMADLVQKLSSELRSGFRPAIDNFIGFFHAIDWTEPWLMGLIGFHLALLILTVVSRKHINFQMSFFLVALAGVYLSERLNRVLGDNWRSFASQNYFDPHGLFLSVLWSGPLLIIATIILINTLFSLCFMIVRWKRAELR 152          
BLAST of mRNA_L-elsbetiae_contig7601.16521.1 vs. uniprot
Match: A0A5N6P3C3_9ASTR (Transmembrane protein 18 n=2 Tax=Asteraceae TaxID=4210 RepID=A0A5N6P3C3_9ASTR)

HSP 1 Score: 108 bits (269), Expect = 2.690e-26
Identity = 51/125 (40.80%), Postives = 77/125 (61.60%), Query Frame = 0
Query:   52 VGPEGFVENFQAFRSAVDWSEPWIQGILVFHLSLWLFFIVTRKSFGAQVGLFTVILGGTRSSELINTFLRDRWHEFSRQNYFDEHGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVAVKTQQFK 176
            +G +  ++NF  F  A+DW EPW+ G++VFHL + +  I +RK+   Q+ LF + L G   +E +NT L + W  F+ QNYFD HG+F+ V+W+GPLL+    +LVN L     L+V  K  + K
Sbjct:   28 IGMQPAMDNFIGFFHAIDWKEPWLVGLMVFHLVVLIIIITSRKNINFQMYLFLLSLAGVYLAERLNTVLSNNWKSFAGQNYFDRHGVFLSVLWSGPLLVFATIILVNTLFSLCHLIVKWKRAELK 152          
BLAST of mRNA_L-elsbetiae_contig7601.16521.1 vs. uniprot
Match: A0A2G5CNM2_AQUCA (Transmembrane protein 18 n=3 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5CNM2_AQUCA)

HSP 1 Score: 108 bits (269), Expect = 2.920e-26
Identity = 53/140 (37.86%), Postives = 84/140 (60.00%), Query Frame = 0
Query:   38 DVQASLLTQLNAQ-SVGPEGFVENFQAFRSAVDWSEPWIQGILVFHLSLWLFFIVTRKSFGAQVGLFTVILGGTRSSELINTFLRDRWHEFSRQNYFDEHGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVAVKTQQFK 176
            D  A L+ +  A+   G +  V+NF+ F  A++W EPW+ G++ FH+SL L  +++RK+   Q+ LF + L G   +E +NT L   W  F+ QNYFD HG+F+ V+W+GPLL +   +L+N L     L+V  K  + +
Sbjct:   17 DQMADLVEKFTAELRTGFQPAVDNFKGFFHAINWKEPWLIGLISFHVSLLLIIVISRKNVNFQMLLFLMALAGVYFAEKMNTVLHSNWESFAGQNYFDAHGVFVSVLWSGPLLCMSILILMNTLFSLCQLIVRWKKAELR 156          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7601.16521.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI97_ECTSI6.610e-10881.77Transmembrane protein 18 n=2 Tax=Ectocarpus TaxID=... [more]
A0A835ZFQ2_9STRA8.830e-3645.64Transmembrane protein 18 n=1 Tax=Tribonema minus T... [more]
A0A7S2Y0G5_9STRA1.210e-3546.21Transmembrane protein 18 n=1 Tax=Fibrocapsa japoni... [more]
A0A7S4A3H0_9STRA5.240e-3242.86Transmembrane protein 18 n=1 Tax=Pelagomonas calce... [more]
A0A7S2SGF8_9STRA8.200e-3040.28Transmembrane protein 18 n=1 Tax=Rhizochromulina m... [more]
A0A7S2CTX0_9STRA2.570e-2840.27Transmembrane protein 18 n=1 Tax=Dictyocha speculu... [more]
A0A837A383_9ROSI3.600e-2739.29Transmembrane protein 18 n=4 Tax=Salix TaxID=40685... [more]
U5FW19_POPTR1.430e-2637.86Transmembrane protein 18 n=8 Tax=Populus TaxID=368... [more]
A0A5N6P3C3_9ASTR2.690e-2640.80Transmembrane protein 18 n=2 Tax=Asteraceae TaxID=... [more]
A0A2G5CNM2_AQUCA2.920e-2637.86Transmembrane protein 18 n=3 Tax=Thalictroideae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026721Transmembrane protein 18PFAMPF14770TMEM18coord: 64..178
e-value: 3.8E-39
score: 133.3
NoneNo IPR availablePANTHERPTHR22593FAMILY NOT NAMEDcoord: 25..183
NoneNo IPR availablePANTHERPTHR22593:SF2TRANSMEMBRANE PROTEIN 18coord: 25..183
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 100..120
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 140..170
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..91
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 121..139
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 171..203
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 92..99
NoneNo IPR availableTMHMMTMhelixcoord: 74..91
NoneNo IPR availableTMHMMTMhelixcoord: 138..160
NoneNo IPR availableTMHMMTMhelixcoord: 96..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7601contigL-elsbetiae_contig7601:5180..7095 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7601.16521.1mRNA_L-elsbetiae_contig7601.16521.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7601 4613..7095 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7601.16521.1 ID=prot_L-elsbetiae_contig7601.16521.1|Name=mRNA_L-elsbetiae_contig7601.16521.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=204bp
MASAAEDVGDRASDSLGEGDTADKLEQHGEAFTGFLGDVQASLLTQLNAQ
SVGPEGFVENFQAFRSAVDWSEPWIQGILVFHLSLWLFFIVTRKSFGAQV
GLFTVILGGTRSSELINTFLRDRWHEFSRQNYFDEHGIFMGVMWAGPLLL
LGFTMLVNLLCQAASLLVAVKTQQFKREIAAKKEGGKSKAKRGLKDKKAS
KQA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026721TMEM18