prot_L-elsbetiae_contig760.16511.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig760.16511.1
Unique Nameprot_L-elsbetiae_contig760.16511.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length196
Homology
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BLAST of mRNA_L-elsbetiae_contig760.16511.1 vs. uniprot
Match: D8LHU6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU6_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 4.270e-9
Identity = 34/55 (61.82%), Postives = 40/55 (72.73%), Query Frame = 0 
Query:  138 ASAGTTAPGSGARPAARSWDDVSRQRGQGRHASTGMGRPAATVEPPGNNWALGGV 192
            AS+ T +  SG  PAARSW DVSRQ+G+GRHA  G+GR  A  EPPG+ WALGG 
Sbjct: 1449 ASSHTPSARSGRPPAARSWGDVSRQQGKGRHAVPGVGRAVAVGEPPGDEWALGGA 1503
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BLAST of mRNA_L-elsbetiae_contig760.16511.1 vs. uniprot
Match: A0A6H5KEN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEN8_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 1.370e-5
Identity = 30/56 (53.57%), Postives = 37/56 (66.07%), Query Frame = 0 
Query:  138 ASAGTTAPGSGARPAARSWDDVSRQRGQGRHASTGMGRPAATVEPPGNNWALGGVR 193
            AS+ T +  SG   AARSW DVSRQ+G+GRHA  G+G+     EP G+ WA GG R
Sbjct:  349 ASSHTPSASSGRVRAARSWGDVSRQQGKGRHAVPGVGQAVGVGEPLGDEWASGGAR 404
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig760.16511.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHU6_ECTSI4.270e-961.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KEN8_9PHAE1.370e-553.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig760contigL-elsbetiae_contig760:11423..12341 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig760.16511.1mRNA_L-elsbetiae_contig760.16511.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig760 11423..12342 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig760.16511.1 ID=prot_L-elsbetiae_contig760.16511.1|Name=mRNA_L-elsbetiae_contig760.16511.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=196bp
RSARRTVDTSNASLDFGGGDGDGGGGGDGGGAVVDLFPRSLGSALSGPPG
ARSSPQQHQRSQRPPQQQQQQPASISSFAYNPTPLPPPPQAIAPPPPGHA
GTDPGAASQWQQQPQRRHRMGGGAGPEPSAGTVTHASASAGTTAPGSGAR
PAARSWDDVSRQRGQGRHASTGMGRPAATVEPPGNNWALGGVRQRG
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