mRNA_L-elsbetiae_contig10.17.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10.17.1 vs. uniprot
Match: A0A6B7EVT1_9PHAE (DNA-directed RNA polymerase subunit gamma n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EVT1_9PHAE) HSP 1 Score: 1164 bits (3010), Expect = 0.000e+0 Identity = 570/618 (92.23%), Postives = 597/618 (96.60%), Query Frame = 1 Query: 1 MKNLKQKFDYVKINLASPERIREWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKSWECTCGLHKYKEKNVFFCEVCGVELTETRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPVKELESVIYNGIGPNQDDDVEKYEQVFLSSFYDSEGEGFHYGTKRQGAEIIYDRLKKIDLKIEIETNRNIMFLDTSKTKVEVAIKKIRIFENFLTTRTRPEWMVFYFLPVLPPGIRPIVQLENGRFATSDLNELYRKIIIRNNRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCASFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKGLRGSNNYFANFNEVISAYEQKQLQLHSAIWVRCPNDVNLDSPLKFIKKITLSKTTNLVIYNNLQRKEKMSGELLVQYLRTTPGRIIFNQCVNDILNKSEVK 1854 MKNLKQKFDYVKINLASPERI+EWAEKVLPNGE VGEVTEPETINYRTHKPEKGGLFCEKIFGPVK+WEC+CGLHK+K+K+VFFCEVCGVE+TE+RVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASP+ ELE+VIYNG P+QD+DV KYE+VFLSSFYD+EGEGFHYG KRQGAEI+Y RLK +DLK+EIE NRNIMF +T+K KVE AIKKIRIFENFLTT TRPEWMV YFLPVLPPGIRPIV+L+NGRFATSDLNELYRKIIIRN RLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIY NEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVC+SFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTT+NRK LRGSNNYFANFNEVISAY+QKQLQLHSAIWVRCPND+NLD+PLKFIKKI LSKTT LVIYNNLQRKE + GELLVQYLRTTPGRIIFNQCVNDILNKSEVK Sbjct: 1 MKNLKQKFDYVKINLASPERIQEWAEKVLPNGERVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECSCGLHKFKKKDVFFCEVCGVEVTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPINELEAVIYNGKEPDQDEDVAKYEEVFLSSFYDTEGEGFHYGKKRQGAEILYHRLKNLDLKVEIEKNRNIMFFETAKKKVEAAIKKIRIFENFLTTNTRPEWMVLYFLPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYGNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCSSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTRNRKNLRGSNNYFANFNEVISAYKQKQLQLHSAIWVRCPNDINLDNPLKFIKKINLSKTTQLVIYNNLQRKETIDGELLVQYLRTTPGRIIFNQCVNDILNKSEVK 618
BLAST of mRNA_L-elsbetiae_contig10.17.1 vs. uniprot
Match: D1J788_ECTSI (DNA-directed RNA polymerase subunit beta' n=8 Tax=Ectocarpales TaxID=2877 RepID=D1J788_ECTSI) HSP 1 Score: 1138 bits (2944), Expect = 0.000e+0 Identity = 556/618 (89.97%), Postives = 587/618 (94.98%), Query Frame = 1 Query: 1 MKNLKQKFDYVKINLASPERIREWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKSWECTCGLHKYKEKNVFFCEVCGVELTETRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPVKELESVIYNGIGPNQDDDVEKYEQVFLSSFYDSEGEGFHYGTKRQGAEIIYDRLKKIDLKIEIETNRNIMFLDTSKTKVEVAIKKIRIFENFLTTRTRPEWMVFYFLPVLPPGIRPIVQLENGRFATSDLNELYRKIIIRNNRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCASFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKGLRGSNNYFANFNEVISAYEQKQLQLHSAIWVRCPNDVNLDSPLKFIKKITLSKTTNLVIYNNLQRKEKMSGELLVQYLRTTPGRIIFNQCVNDILNKSEVK 1854 MKNLKQKFDYVKINLASPERI+EWAEK LPNGEIVGEVT+PETINYRTHKPEKGGLFCEKIFGPVK+WECTCGLHKYKEKNVFFCEVCGVELTE+RVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASP+ +LE+VIYNG P+QD+D+ KYEQVFLSSFYD+EGEGFHYG KRQGAEI+Y RLKKIDLK EIE NRN+MF K KVEVAIKKIRIFENFLTT TRPEWMV +F+PVLPPGIRPIV+L+NGRFATSDLNELYRKIIIRN RLKRLLSVHAPSVV+ TEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGP LKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEIL+KHPIILNRAPTLHRLGVQAFDPVL+RGR+IQLHPLVC+SFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLS SSGEPTIQPSQDMVLGFYYLTTQNR L GSNNYF++FNEVISAY+QKQ+Q+HS+IWVRCPN++NLDSPLKFIKKI LS L IYNNLQRKE M GELLVQ+LRTTPGRIIFNQCVNDILNKSEVK Sbjct: 1 MKNLKQKFDYVKINLASPERIKEWAEKTLPNGEIVGEVTQPETINYRTHKPEKGGLFCEKIFGPVKNWECTCGLHKYKEKNVFFCEVCGVELTESRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPISKLEAVIYNGKKPDQDEDLAKYEQVFLSSFYDTEGEGFHYGKKRQGAEILYHRLKKIDLKTEIEINRNVMFFSEVKKKVEVAIKKIRIFENFLTTGTRPEWMVLHFIPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVVLTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPHLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILQKHPIILNRAPTLHRLGVQAFDPVLVRGRSIQLHPLVCSSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSASSGEPTIQPSQDMVLGFYYLTTQNRTNLCGSNNYFSSFNEVISAYQQKQVQIHSSIWVRCPNEINLDSPLKFIKKINLSNNNTLTIYNNLQRKETMGGELLVQFLRTTPGRIIFNQCVNDILNKSEVK 618
BLAST of mRNA_L-elsbetiae_contig10.17.1 vs. uniprot
Match: A0A0R6MFT6_UNDPI (DNA-directed RNA polymerase subunit beta' n=25 Tax=Laminariales TaxID=2886 RepID=A0A0R6MFT6_UNDPI) HSP 1 Score: 1047 bits (2707), Expect = 0.000e+0 Identity = 510/614 (83.06%), Postives = 556/614 (90.55%), Query Frame = 1 Query: 1 MKNLKQKFDYVKINLASPERIREWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKSWECTCGLHKYKEKNVFFCEVCGVELTETRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPVKELESVIYNGIGPNQDDDVEKYEQVFLSSFYDSEGEGFHYGTKRQGAEIIYDRLKKIDLKIEIETNRNIMFLDTSKTKVEVAIKKIRIFENFLTTRTRPEWMVFYFLPVLPPGIRPIVQLENGRFATSDLNELYRKIIIRNNRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCASFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKGLRGSNNYFANFNEVISAYEQKQLQLHSAIWVRCPNDVNLDSPLKFIKKITLSKTTNLVIYNNLQRKEKMSGELLVQYLRTTPGRIIFNQCVNDILNK 1842 MKN+KQ+F+YVKINLASPERI+EWAEK+LPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVK+ ECTCG +K+KE + CE+CGVELTE+RVRRHRMGYI LLSPVVHIWYLKGSPS LS +L S + +LE V+YNG P QD DV KY+ F YD+EGEGF YG KRQGAEI+YDRLK+IDLK+EI +NRNIMF VE AIK+IRIFENFLTT TRPEWMV +FLPVLPPGIRP+V+L+NGRFATSDLNELYRKIIIRN RLKRLLSVHAPSVVI TEKRMIQEAVDTLIDNGKRGSK+LDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQL+LNQCGLPYEMAIELFLPFIIY+LLSQGLSHSIK+AKKIIYSN+ FIWYLTEEIL+KHPIILNRAPTLHRLGVQAFDPVL+RGRAIQLHPLVC +FNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPS+GEP IQPSQDMVLGFYYLT QNR GL+GSNNYF+NFNEVI+AYEQKQLQLHS+IWVRCP D+ LD+ LKF+K I L L IYNNLQRKE G+LLVQY+RTTPGRIIFNQC+N+ILNK Sbjct: 1 MKNMKQQFEYVKINLASPERIKEWAEKILPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNCECTCGRYKHKEPDTLICEICGVELTESRVRRHRMGYINLLSPVVHIWYLKGSPSFLSTILDSSITKLEGVVYNGKEPEQDQDVSKYDDFF----YDTEGEGFVYGKKRQGAEILYDRLKRIDLKVEIASNRNIMFCSNVTKAVEDAIKRIRIFENFLTTNTRPEWMVLHFLPVLPPGIRPMVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVILTEKRMIQEAVDTLIDNGKRGSKVLDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLELNQCGLPYEMAIELFLPFIIYKLLSQGLSHSIKKAKKIIYSNQSFIWYLTEEILRKHPIILNRAPTLHRLGVQAFDPVLVRGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSTGEPNIQPSQDMVLGFYYLTAQNRMGLKGSNNYFSNFNEVITAYEQKQLQLHSSIWVRCPKDITLDTELKFLKTIVLDNLQTLHIYNNLQRKETKDGQLLVQYIRTTPGRIIFNQCINNILNK 610
BLAST of mRNA_L-elsbetiae_contig10.17.1 vs. uniprot
Match: A0A8F0F9J3_9PHAE (DNA-directed RNA polymerase subunit gamma n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9J3_9PHAE) HSP 1 Score: 1024 bits (2648), Expect = 0.000e+0 Identity = 500/614 (81.43%), Postives = 550/614 (89.58%), Query Frame = 1 Query: 1 MKNLKQKFDYVKINLASPERIREWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKSWECTCGLHKYKEKNVFFCEVCGVELTETRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPVKELESVIYNGIGPNQDDDVEKYEQVFLSSFYDSEGEGFHYGTKRQGAEIIYDRLKKIDLKIEIETNRNIMFLDTSKTKVEVAIKKIRIFENFLTTRTRPEWMVFYFLPVLPPGIRPIVQLENGRFATSDLNELYRKIIIRNNRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCASFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKGLRGSNNYFANFNEVISAYEQKQLQLHSAIWVRCPNDVNLDSPLKFIKKITLSKTTNLVIYNNLQRKEKMSGELLVQYLRTTPGRIIFNQCVNDILNK 1842 MKN+KQ+F+YVKINLASP+ I+EWAEK LPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVK+WECTCG +K ++ ++ CE CGVELTE+RVRRHRMGYI LLSPVVHIWYLKGSPSLLSA+L S + LESVIYNG P QD D+ KY F YD+ EGF + K QGAEI+YD LKKI+LK EIE NRNIM + K+E AIK++RIFENFLTT TRPEW + +FLPVLPPGIRP+V+L+NGRFATSDLNELYRKIIIRN RLKRLLSVHAP+VVI TEKRMIQEAVDTLIDNGKRGSK+LDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQL+LNQCGLPYEMAIELFLPF+IY+LLSQ LSHSIKRAKKIIYSN PFIW+LTEEIL+KHPIILNRAPTLHRLGVQAFDP+L+RGRAIQLHPLVCA+FNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPS+GEP IQPSQDMVLGFYYLT QNR L+G+NNYF++FNEVISAYEQKQLQ+HS+IWVRCP D+ LD LKF+K I LS NL IYNNLQRKE +GELLVQY+RTTPGRIIFN+CVNDILNK Sbjct: 1 MKNMKQQFEYVKINLASPDCIKEWAEKTLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECTCGRYKQRDLSIVVCETCGVELTESRVRRHRMGYINLLSPVVHIWYLKGSPSLLSAILYSSITRLESVIYNGKEPGQDQDISKYTDFF----YDAMDEGFVFSKKSQGAEILYDSLKKINLKEEIEDNRNIMLCSKAVKKIEDAIKRVRIFENFLTTNTRPEWTILHFLPVLPPGIRPMVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPNVVILTEKRMIQEAVDTLIDNGKRGSKVLDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLELNQCGLPYEMAIELFLPFLIYKLLSQELSHSIKRAKKIIYSNRPFIWHLTEEILRKHPIILNRAPTLHRLGVQAFDPILVRGRAIQLHPLVCAAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSTGEPNIQPSQDMVLGFYYLTAQNRMQLKGANNYFSDFNEVISAYEQKQLQVHSSIWVRCPTDITLDIQLKFLKTIVLSNNENLHIYNNLQRKETKTGELLVQYIRTTPGRIIFNECVNDILNK 610
BLAST of mRNA_L-elsbetiae_contig10.17.1 vs. uniprot
Match: D1GJH3_FUCVE (DNA-directed RNA polymerase subunit beta' n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJH3_FUCVE) HSP 1 Score: 996 bits (2575), Expect = 0.000e+0 Identity = 476/615 (77.40%), Postives = 546/615 (88.78%), Query Frame = 1 Query: 1 MKNLKQKFDYVKINLASPERIREWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKSWECTCGLHKYKEKNVFFCEVCGVELTETRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPVKELESVIYNGIGPNQDDDVEKYEQVFLSSFYDSEGEGFHYGTKRQGAEIIYDRLKKIDLKIEIETNRNIMFLDTSKTKVEVAIKKIRIFENFLTTRTRPEWMVFYFLPVLPPGIRPIVQLENGRFATSDLNELYRKIIIRNNRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCASFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKGLRGSNNYFANFNEVISAYEQKQLQLHSAIWVRC--PNDVNLDSPLKFIKKITLSKTTNLVIYNNLQRKEKMSGELLVQYLRTTPGRIIFNQCVNDILN 1839 MKN+K++F+Y++INLASP+RI+EW+EK+LP GEI+GEVTEPETINYRTHKPEKGGLFCEKIFGPVK+WEC CG +K+K++ + CE+CGVELTE+RVRRHRMGYIKLL+PVVHIWYLKGSPS LS +L S + ++E+++Y+G P ++ ++ KYE F Y+++G GF YG K QG EI+YD+LK+IDLK+EIE NRNIMF VE AIK+IRIFENFLTT TRPEWM+ FLPVLPPGIRP+VQL+NGRFATSDLNELYRKIIIRN RLKRLLSVHAPS+VI TEKRMIQE+VDTLIDNGKRGSK++D N+RPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGP+L LNQCGLPYEMAIELFLPFIIYRLLSQGL HSIK+AKKIIYSN+ FIWYLT+EIL KHPIILNRAPTLHRLGVQAFDP+L+ GRAIQLHPLVC +FNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPS+GEP IQPSQDMVLGFYYLT QNR GL+G+NNYF+NF+EV+SAY+QKQLQ+HS IWVRC N + LD+ LKF K I L N+ +YNNLQRKE G+LLVQY+RTTPGRIIFNQC+NDILN Sbjct: 1 MKNVKEQFEYLRINLASPKRIKEWSEKILPTGEIIGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECACGRYKHKDEEIAICEICGVELTESRVRRHRMGYIKLLTPVVHIWYLKGSPSFLSIVLDSSISQIEAIVYSGKEPEKEHNILKYEDFF----YENQGPGFVYGKKPQGTEILYDKLKRIDLKVEIEINRNIMFCSNVTKVVEAAIKRIRIFENFLTTNTRPEWMILNFLPVLPPGIRPMVQLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSIVIMTEKRMIQESVDTLIDNGKRGSKVVDTNRRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPELHLNQCGLPYEMAIELFLPFIIYRLLSQGLCHSIKKAKKIIYSNQSFIWYLTKEILSKHPIILNRAPTLHRLGVQAFDPILVNGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSTGEPNIQPSQDMVLGFYYLTAQNRIGLKGTNNYFSNFHEVLSAYQQKQLQIHSTIWVRCFNSNQIFLDNELKFCKTIALGNDINIHVYNNLQRKETSQGKLLVQYIRTTPGRIIFNQCLNDILN 611
BLAST of mRNA_L-elsbetiae_contig10.17.1 vs. uniprot
Match: A0A8F0JZT2_9PHAE (DNA-directed RNA polymerase subunit gamma n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZT2_9PHAE) HSP 1 Score: 985 bits (2546), Expect = 0.000e+0 Identity = 479/614 (78.01%), Postives = 541/614 (88.11%), Query Frame = 1 Query: 1 MKNLKQKFDYVKINLASPERIREWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKSWECTCGLHKYKEKNVFFCEVCGVELTETRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPVKELESVIYNGIGPNQDDDVEKYEQVFLSSFYDSEGEGFHYGTKRQGAEIIYDRLKKIDLKIEIETNRNIMFLDTSKTKVEVAIKKIRIFENFLTTRTRPEWMVFYFLPVLPPGIRPIVQLENGRFATSDLNELYRKIIIRNNRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCASFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKGLRGSNNYFANFNEVISAYEQKQLQLHSAIWVRCPNDVNLDSPLKFIKKITLSKTTNLVIYNNLQRKEKMSGELLVQYLRTTPGRIIFNQCVNDILNK 1842 MK +KQ+F+YVKINLASPERI+EW EK LPNG+IVGEV EPETINYRTHKPEK GLFCEKIFGPVK+WECTCG +K+KE++ CEVCGVE+TE+RVRRHRMGYIKLL+PV+HIWYLKGSPS LSA+LAS V +E ++Y +D + YE F + EGF YG K +G EI+YDRLKKI+LK EIE+NRNIMF + VE AIK+IRI+ENFLTT TRPEWM+ FLPVLPPG+RP+V+L++GRFATSDLNELYRKII+RN RL RLLSVHAP++VI+TEKRMIQEAVDTLIDNGKRGSK+LDAN+RPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQL+LNQCGLPYEMAIELFLPF+I++LL QGL++SIKRAKKIIYSN FIWYLTEE LKKHPIILNRAPTLHRLGVQAFDPVL+RGRAIQLHPLVC +FNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPS+GEP IQP+QDMVLGFYYLT NR L+G+NNYF+NFNEV+ AYEQKQLQLHS++WVR PN++ LD+PL ++K ITL NL IYNNLQRKE M G+LLVQYLRTTPGRIIFNQCVNDILNK Sbjct: 1 MKKVKQEFEYVKINLASPERIKEWGEKTLPNGKIVGEVIEPETINYRTHKPEKDGLFCEKIFGPVKNWECTCGRYKHKEEDTLICEVCGVEVTESRVRRHRMGYIKLLAPVLHIWYLKGSPSYLSAILASSVTNIEGLVYG-----RDPEFFDYEDFFFND------EGFVYGKKLEGTEILYDRLKKINLKTEIESNRNIMFCSNATKVVEDAIKRIRIYENFLTTNTRPEWMILNFLPVLPPGLRPMVKLDSGRFATSDLNELYRKIILRNKRLGRLLSVHAPNIVITTEKRMIQEAVDTLIDNGKRGSKVLDANRRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLQLNQCGLPYEMAIELFLPFLIHKLLFQGLANSIKRAKKIIYSNRSFIWYLTEETLKKHPIILNRAPTLHRLGVQAFDPVLVRGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSTGEPNIQPTQDMVLGFYYLTANNRMQLKGANNYFSNFNEVVIAYEQKQLQLHSSVWVRLPNNITLDTPLTYLKTITLKSNENLHIYNNLQRKETMDGKLLVQYLRTTPGRIIFNQCVNDILNK 603
BLAST of mRNA_L-elsbetiae_contig10.17.1 vs. uniprot
Match: A0A141BSD2_9PHAE (DNA-directed RNA polymerase subunit beta' n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSD2_9PHAE) HSP 1 Score: 984 bits (2544), Expect = 0.000e+0 Identity = 471/613 (76.84%), Postives = 546/613 (89.07%), Query Frame = 1 Query: 1 MKNLKQKFDYVKINLASPERIREWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKSWECTCGLHKYKEKNVFFCEVCGVELTETRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPVKELESVIYNGIGPNQDDDVEKYEQVFLSSFYDSEGEGFHYGTKRQGAEIIYDRLKKIDLKIEIETNRNIMFLDTSKTKVEVAIKKIRIFENFLTTRTRPEWMVFYFLPVLPPGIRPIVQLENGRFATSDLNELYRKIIIRNNRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCASFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKGLRGSNNYFANFNEVISAYEQKQLQLHSAIWVRCPNDVNLDSPLKFIKKITLSKTTNLVIYNNLQRKEKMSGELLVQYLRTTPGRIIFNQCVNDILN 1839 MK ++++F+Y++INLASP+RI+EW++K LP GE++GEVTEPETINYRTHKPEKGGLFCEKIFGPVK+WEC CG +K+++ + CE CGVELTE+RVRRHRMGYIKLL+PVVHIWYLKG+PS L+++L SP+ +E++IY+G P QD +V KYE F +++ GF +G K QGAEI+YD+LK IDLKIEIETNRNIMF T VE AIK+IRIFENFL+T TRPEWM+ FLPVLPPGIRP+V+LENGRFATSDLNELYRKIIIRN RLKRLLSVHAPS+VI TEKRMIQE+VDTLIDNGKRGSK++DAN+RPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGP+L+LNQCGLPYEMAIELFLPFIIY+LLSQGL HSIK+AKKII+SN+PFIWYLT+EIL KHPIILNRAPTLHRLGVQAFDPVL++GRAIQLHPLVC +FNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSP++GEP IQPSQDM+LGFYYLTT NR GL+G+NNYF++F+EV+SAY+ KQL++HS IWVRC N++ LDS LKFIK I + L IYNNLQRKE G+ LVQY+RTTPGRIIFNQC+NDILN Sbjct: 1 MKTIEEQFEYIRINLASPQRIKEWSQKTLPTGEVIGEVTEPETINYRTHKPEKGGLFCEKIFGPVKNWECACGRYKHRDDEISICETCGVELTESRVRRHRMGYIKLLTPVVHIWYLKGAPSFLASILDSPISRIETIIYSGKEPEQDQEVLKYEDFFP----ENQLPGFVFGKKPQGAEILYDKLKNIDLKIEIETNRNIMFCSTVTKVVEAAIKRIRIFENFLSTNTRPEWMILQFLPVLPPGIRPMVKLENGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSIVIITEKRMIQESVDTLIDNGKRGSKVVDANRRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPKLQLNQCGLPYEMAIELFLPFIIYKLLSQGLCHSIKKAKKIIHSNQPFIWYLTKEILSKHPIILNRAPTLHRLGVQAFDPVLVKGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPATGEPNIQPSQDMILGFYYLTTHNRLGLKGANNYFSSFHEVLSAYQHKQLKVHSPIWVRCSNELLLDSKLKFIKTIN-NNNNKLHIYNNLQRKETSEGKFLVQYIRTTPGRIIFNQCLNDILN 608
BLAST of mRNA_L-elsbetiae_contig10.17.1 vs. uniprot
Match: A0A8F0JYE1_9PHAE (DNA-directed RNA polymerase subunit gamma n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JYE1_9PHAE) HSP 1 Score: 907 bits (2343), Expect = 0.000e+0 Identity = 448/611 (73.32%), Postives = 510/611 (83.47%), Query Frame = 1 Query: 1 MKNLKQKFDYVKINLASPERIREWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKSWECTCGLHKYKEKNVFFCEVCGVELTETRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPVKELESVIYNGIGPNQDDDVEKYEQVFLSSFYDSEGEGFHYGTKRQGAEIIYDRLKKIDLKIEIETNRNIMFLDTSKTKVEVAIKKIRIFENFLTTRTRPEWMVFYFLPVLPPGIRPIVQLENGRFATSDLNELYRKIIIRNNRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCASFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKGLRGSNNYFANFNEVISAYEQKQLQLHSAIWVRCPNDVNLDSPLKFIKKITLSKTTNLVIYNNLQRKEKMSGELLVQYLRTTPGRIIFNQCVNDI 1833 M KQ F VKINLASPERI+ W+EK LP+GEI+GEV E ETINYRTHKPEKGGLFCEKIFGPVK+WEC CG +K K KN CEVC VE+ ++RVRRHRMGYI LL+PVVH+WYLKGSPS LSA+L SPVK +E V+Y G D +YEQ + E F + +GAEIIYD+L+KIDLK EIE NR IMF + E AIK+IR+FENFLTT T+PEWMV LPVLPPGIRP++Q+ NGRFATSDLNELYRKIIIRNNRL RL+SVHAP+++I TEKRMIQE+VD LIDNGKRG K+LD++KRPLKSLADIIEGKQGRFR NLLGKR DYSGRSVIIVGPQL LNQCGLPYEMAIELFLPFII++LL QGL +SIK+AKKII+SN+ FIW+L +EIL +HPIILNRAPTLHRLGVQAFDPVL+RGRAIQLHPLVC +FNADFDGDQMAVHIPLSFESQLETRLCLLA NNFLSP++GE I PSQDMVLGFYYLTTQNR L+G+NNYF+NFNEVISAY+QKQL +HS+IWVRC ++++L + LKF K I L L IYNNLQRKE +G+ LVQYLRTTPGRI+FNQCVNDI Sbjct: 1 MNKNKQDFVSVKINLASPERIKAWSEKELPSGEIIGEVLESETINYRTHKPEKGGLFCEKIFGPVKNWECACGRYKQKTKNDLICEVCSVEVIDSRVRRHRMGYISLLTPVVHVWYLKGSPSFLSAILESPVKTIEQVVY---GKTFGLDFSRYEQFLFTE------EDFATEKRLEGAEIIYDQLQKIDLKTEIEMNREIMFCSNNVKSTEDAIKRIRLFENFLTTNTKPEWMVLNCLPVLPPGIRPMIQMANGRFATSDLNELYRKIIIRNNRLGRLISVHAPNMIIKTEKRMIQESVDALIDNGKRGEKVLDSHKRPLKSLADIIEGKQGRFRLNLLGKRTDYSGRSVIIVGPQLALNQCGLPYEMAIELFLPFIIHKLLFQGLVYSIKKAKKIIFSNDSFIWFLLKEILIQHPIILNRAPTLHRLGVQAFDPVLVRGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQLETRLCLLATNNFLSPATGEANIHPSQDMVLGFYYLTTQNRMKLKGANNYFSNFNEVISAYQQKQLHVHSSIWVRCSDNIDLYTQLKFFKTIELQNGNRLHIYNNLQRKETKNGDFLVQYLRTTPGRILFNQCVNDI 602
BLAST of mRNA_L-elsbetiae_contig10.17.1 vs. uniprot
Match: A0A8E6D698_9PHAE (DNA-directed RNA polymerase subunit beta' n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D698_9PHAE) HSP 1 Score: 849 bits (2194), Expect = 6.490e-305 Identity = 416/615 (67.64%), Postives = 504/615 (81.95%), Query Frame = 1 Query: 1 MKNLKQKFDYVKINLASPERIREWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKSWECTCGLHKYKEKNVFFCEVCGVELTETRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPVKELESVIYNGIGPNQ---DDDVEKYEQVFLSSFYDSEGEGFHYGTKRQGAEIIYDRLKKIDLKIEIETNRNIMFLDTSKTKVEVAIKKIRIFENFLTTRTRPEWMVFYFLPVLPPGIRPIVQLENGRFATSDLNELYRKIIIRNNRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCASFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKGLRGSNNYFANFNEVISAYEQKQLQLHSAIWVRCPNDVNLDSPLKFIKKITLSKTTNLVIYNNLQRKEKMSGELLVQYLRTTPGRIIFNQCVNDIL 1836 +K +K++F+YVKINLASPE+IR W EK LP GE+VGEVTE ETINYRT+KPEKGGLFCEKIFGP+K+WEC CG + + CE CGVE+TE++VRRHRMGYI+LL PV HIWYLKGSPS LS +L VK LE +IY + D++ E+ E++ + S G + +G +Y+RLKKI+L+ EIE +R IM S E AIK+IRI ENFL+T T+PEWM+ YFLPV+PPG+RPI++LENGRFA+SDLNELYR+IIIRN RL RL+SVHAPSVV++TE RMIQE++DTLIDNGKRG+ ++D++KRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQL+LNQCGLPYEMAIELFLPF++++L+ QGL++SI +AKKIIY+N+ FIW L +EIL +HP+ILNRAPTLHRLGVQAFD +L+ GRAIQLHPLVC +FNADFDGDQMAVHIPLSFESQ+ETRLCLLAPNNFLSP++G+P IQP+QDMVLGFYYLT QN L+GSN+YF +F EVI AY QKQL +HS+IWVRCP ++ LD L K +TL K + + IY +LQRKE G LLVQYLRTTPGR+IFNQ VN++L Sbjct: 3 IKKMKRQFEYVKINLASPEQIRGWGEKYLPTGEVVGEVTESETINYRTYKPEKGGLFCEKIFGPIKNWECGCGQYTQSFDDGIICENCGVEVTESKVRRHRMGYIRLLVPVAHIWYLKGSPSFLSIVLKQSVKTLEEMIYGKDLKEEGFLDEENEEDEEIINKKHFFS-------GNQLEGINSLYNRLKKINLRDEIEKSREIMLCAKSAKPFEDAIKRIRILENFLSTNTKPEWMLLYFLPVIPPGLRPIIKLENGRFASSDLNELYRRIIIRNKRLGRLMSVHAPSVVLNTETRMIQESIDTLIDNGKRGATVVDSHKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLELNQCGLPYEMAIELFLPFLMHKLIYQGLANSINKAKKIIYNNKSFIWGLLKEILGRHPVILNRAPTLHRLGVQAFDAILVTGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQIETRLCLLAPNNFLSPATGDPVIQPTQDMVLGFYYLTAQNHTNLKGSNHYFGSFEEVILAYSQKQLHIHSSIWVRCPVNIELDIKLDLPKIVTL-KDSRIKIYKDLQRKETHKGHLLVQYLRTTPGRVIFNQEVNNLL 609
BLAST of mRNA_L-elsbetiae_contig10.17.1 vs. uniprot
Match: A0A2I4Q2A7_9PHAE (DNA-directed RNA polymerase subunit beta' n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2A7_9PHAE) HSP 1 Score: 848 bits (2190), Expect = 2.110e-304 Identity = 420/611 (68.74%), Postives = 492/611 (80.52%), Query Frame = 1 Query: 10 LKQKFDYVKINLASPERIREWAEKVLPNGEIVGEVTEPETINYRTHKPEKGGLFCEKIFGPVKSWECTCGLHKYKEKNV-FFCEVCGVELTETRVRRHRMGYIKLLSPVVHIWYLKGSPSLLSAMLASPVKELESVIYNGIGPNQDDDVEKYEQVFLSSFYDSEGEGFHYGTKRQGAEIIYDRLKKIDLKIEIETNRNIMFLDTSKTKVEVAIKKIRIFENFLTTRTRPEWMVFYFLPVLPPGIRPIVQLENGRFATSDLNELYRKIIIRNNRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCASFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTQNRKGLRGSNNYFANFNEVISAYEQKQLQLHSAIWVRCPNDVNLDSPLKFIKKITLSKTTNLVIYNNLQRKEKMSGELLVQYLRTTPGRIIFNQCVNDILN 1839 ++Q++ ++INLAS ERI++W+E LPNGEIVGE+TE +TINYRTHKPE+ GLFC+KIFGP+K WEC CGL+K + CEVCGV +TE+RVRRHRMGYI LL PVVHIWYL+G P+ LS +L +P+K+LE IY G N D+ YE+ + EGE + QGAEIIY +LK++DLK EI+ NR IM S VE AIK++RIFENFL T+T+PEWM+F LPVLPPG+RPIVQL+NGR ATSDLNE YRKI+IR RL RLLSV APS++I TEKRMIQE+VD LIDNGKRG K+LD +KRPLKSLA++IEGKQGRFRQNLLGKRVDYSGRSVIIVGPQL LNQCGLPYEMA+ELFLPF+I+++ L+ SIK AKKIIYSN+ FIWYL +EIL KHPIILNRAPTLHRLGVQAFDPVL+ GRAIQLHPLVC +FNADFDGDQMAVHIPLS ESQLETRLCLLA NNFLSP++GEP I PSQDMVLGFYYLTTQNR L+G+NNYF+ FNEVISAY+QK+L LHS+IWVRCP V L+ L +K L L IY N Q+KE G+ L QYLRTTPGRIIFN+ +N+ILN Sbjct: 1 MRQEYQCIQINLASSERIKKWSEITLPNGEIVGEITESDTINYRTHKPERNGLFCQKIFGPIKDWECICGLYKNEVTQAGLICEVCGVAITESRVRRHRMGYINLLHPVVHIWYLRGIPNFLSIILKAPLKKLEETIY---GKNLSRDLTNYEEF---EEFILEGELLSAQNQLQGAEIIYKKLKRLDLKEEIKNNRLIMVSSKSTKAVEDAIKRVRIFENFLATKTKPEWMIFNVLPVLPPGLRPIVQLDNGRLATSDLNEFYRKILIRTQRLGRLLSVQAPSMIIFTEKRMIQESVDALIDNGKRGPKVLDIHKRPLKSLAEMIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLHLNQCGLPYEMAVELFLPFLIHKIFFLKLAGSIKTAKKIIYSNKSFIWYLLKEILNKHPIILNRAPTLHRLGVQAFDPVLVTGRAIQLHPLVCPAFNADFDGDQMAVHIPLSLESQLETRLCLLATNNFLSPATGEPNILPSQDMVLGFYYLTTQNRIKLKGNNNYFSTFNEVISAYQQKKLHLHSSIWVRCPKTVKLEMELVLLKIHILPNKDKLYIYQNFQKKETFDGKFLTQYLRTTPGRIIFNRRINEILN 605 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10.17.1 >prot_L-elsbetiae_contig10.17.1 ID=prot_L-elsbetiae_contig10.17.1|Name=mRNA_L-elsbetiae_contig10.17.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=619bp MKNLKQKFDYVKINLASPERIREWAEKVLPNGEIVGEVTEPETINYRTHKback to top mRNA from alignment at L-elsbetiae_contig10:32840..34696+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10.17.1 ID=mRNA_L-elsbetiae_contig10.17.1|Name=mRNA_L-elsbetiae_contig10.17.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1857bp|location=Sequence derived from alignment at L-elsbetiae_contig10:32840..34696+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10:32840..34696+ >mRNA_L-elsbetiae_contig10.17.1 ID=mRNA_L-elsbetiae_contig10.17.1|Name=mRNA_L-elsbetiae_contig10.17.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3714bp|location=Sequence derived from alignment at L-elsbetiae_contig10:32840..34696+ (Laminarionema elsbetiae ELsaHSoW15)back to top |