mRNA_L-elsbetiae_contig751.16405.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig751.16405.1 vs. uniprot
Match: D8LQI5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI5_ECTSI) HSP 1 Score: 223 bits (568), Expect = 2.170e-72 Identity = 109/118 (92.37%), Postives = 115/118 (97.46%), Query Frame = 1 Query: 214 MPLADEAASKLLVKEGPDGTVKFNNPAVGDFQVLDALVEYPGSFDLKIIGVDDDTFVSDIRKAVAGCLTNGEDSLIKCSTREKGKYTSITIKVHVENSTQLYKCYEVINEDKRVKFKF 567 MPLAD+AASKLL KEGPDG+ KF+NPAVGDFQVLDALVEYPGSFDLKIIGVDDDTFVSDIRKAVAGCLTNGED++IKCSTREKGKYTSIT+KV VENSTQLYKCYEVINEDKRVKFKF Sbjct: 1 MPLADKAASKLLAKEGPDGSSKFDNPAVGDFQVLDALVEYPGSFDLKIIGVDDDTFVSDIRKAVAGCLTNGEDNVIKCSTREKGKYTSITLKVRVENSTQLYKCYEVINEDKRVKFKF 118
BLAST of mRNA_L-elsbetiae_contig751.16405.1 vs. uniprot
Match: A0A7S1BKS9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BKS9_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 6.490e-15 Identity = 59/171 (34.50%), Postives = 88/171 (51.46%), Query Frame = 1 Query: 73 GPLAKAPFSSVSRAVLQAGKGFGDTPKPKKPQEPAKDKGPRKQARSLMPLADEAASKLL-----VKEGPDGTVKFNNPAVGD-FQVLDALVEYPGSFDLKIIGVDDDTFVSDIRKAVAGCLTNGEDSLIKCSTREKGKYTSITIKVHVENSTQLYKCYEVINEDKRVKFKF 567 G + +P S ++ AG GFG AK K RK + + ++ + +++ ++ G N G+ +V ++LVEYP +F +KI+G + FV+D+ VA G + S REKGK+TSIT++ VEN+ LYK YEVI D RVKFKF Sbjct: 143 GETSDSPLSIQGKSA--AGAGFGA----------AKKKNTRK-----VEIGEDGSPRIVNDLNNLETDDQGFTLHTNEQTGEKARVFESLVEYPCTFPIKIVGAKEGQFVTDMVDLVAETCNVGRTD-VTYSEREKGKWTSITVQAPVENAQMLYKVYEVIGRDPRVKFKF 295
BLAST of mRNA_L-elsbetiae_contig751.16405.1 vs. uniprot
Match: D7FUE3_ECTSI (UPF0250 protein NE1487 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUE3_ECTSI) HSP 1 Score: 76.6 bits (187), Expect = 3.870e-14 Identity = 37/88 (42.05%), Postives = 54/88 (61.36%), Query Frame = 1 Query: 307 QVLDALVEYPGSFDLKIIGVDDDTFVSDIRKAVAG-CLTNGEDSLIKCSTREKGKYTSITIKVHVENSTQLYKCYEVINEDKRVKFKF 567 + + LV+YP F++K+IG+++ +F DI V+ C D G+Y SIT+ V+N+T LYKCYE+I+ED RVKFKF Sbjct: 93 RAFEYLVDYPCEFEIKVIGINEGSFADDIAATVSAVCEVETSDVRFTVRDTTSGRYQSITVHAPVKNATMLYKCYELIDEDPRVKFKF 180
BLAST of mRNA_L-elsbetiae_contig751.16405.1 vs. uniprot
Match: A0A7S0L5V2_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L5V2_9EUKA) HSP 1 Score: 75.1 bits (183), Expect = 6.260e-14 Identity = 46/123 (37.40%), Postives = 71/123 (57.72%), Query Frame = 1 Query: 202 ARSLMPLADEAASKLLVKEGP--DGTVKFNNPAVGDFQVLDALVEYPGSFDLKIIGVDDDTFVSDIRKAVAGCLTNGEDSLIKCSTREKGKYTSITIKVHVENSTQLYKCYEVINEDKRVKFK 564 AR+++ + +L +E P DGT G F+ L VEYP +K+IG+++ FVSD+R AG +T E+ L+ R+KGKY SIT+++ +++ +Y Y IN+D RVKFK Sbjct: 30 ARAMLSSRRMLHTPMLAQEMPNLDGT--------GSFRTL---VEYPCELSVKVIGLNEGAFVSDMRTMCAG-ITGQEEELVGVRWRDKGKYRSITLQLQFQDADMVYAVYAAINKDPRVKFK 140
BLAST of mRNA_L-elsbetiae_contig751.16405.1 vs. uniprot
Match: A0A6U1NFE4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NFE4_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 2.340e-13 Identity = 43/126 (34.13%), Postives = 69/126 (54.76%), Query Frame = 1 Query: 190 PRKQARSLMPLADEAASKLLVKEGPDGTVKFNNPAVGDFQVLDALVEYPGSFDLKIIGVDDDTFVSDIRKAVAGCLTNGEDSLIKCSTREKGKYTSITIKVHVENSTQLYKCYEVINEDKRVKFKF 567 PR ++ + + +L G +G + P +V + VEYP F +K+IGV F D+ VA C + + IK TR++GKY S++I V+ ++Q+YKCYE +++D+RV FKF Sbjct: 67 PRSSTSAVQQRSTSSRLHILKNAGEEGD-EMKKP-----RVFETHVEYPCEFQIKVIGVRQGQFEQDMVDKVARCCGVEDPTQIKYKTRDQGKYRSVSIFAPVQMASQVYKCYEELDKDERVLFKF 186
BLAST of mRNA_L-elsbetiae_contig751.16405.1 vs. uniprot
Match: M2XRZ9_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XRZ9_GALSU) HSP 1 Score: 73.6 bits (179), Expect = 8.790e-13 Identity = 42/92 (45.65%), Postives = 55/92 (59.78%), Query Frame = 1 Query: 292 AVGDFQVLDALVEYPGSFDLKIIGVDDDTFVSDIRKAVAGCLTNGEDSLIKCSTREKGKYTSITIKVHVENSTQLYKCYEVINEDKRVKFKF 567 A G +++D LV++P F KIIG+ FV DI VA L + S ++ STR+KGKY SITI +S Q+Y Y I+ D RVKFKF Sbjct: 113 ADGQRRLIDELVDFPCKFQFKIIGIRQGNFVEDIVDCVAEVLQI-DPSYMEVSTRDKGKYRSITIDAPCNSSEQVYSIYAAIDRDPRVKFKF 203
BLAST of mRNA_L-elsbetiae_contig751.16405.1 vs. uniprot
Match: A0A836CJU5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJU5_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 1.670e-11 Identity = 40/115 (34.78%), Postives = 62/115 (53.91%), Query Frame = 1 Query: 229 EAASKLLVKEGPDGTVKFNNPAVGDFQVLDALVEYPGSFDLKIIGVDDDTFVSDIRKAVAGCLTNGEDSLIKCSTRE--KGKYTSITIKVHVENSTQLYKCYEVINEDKRVKFKF 567 +A S +L + K NP ++ LV+YP F +K +G + D+ A+ G + E + ++ + R+ GKY S+T+ V NS LYKCYEVI +D+RV+FKF Sbjct: 41 QALSMILRTDADREGRKMGNPRAFEY-----LVDYPCKFQIKAVGHNKGNLADDLA-ALVGSVCEVEPAAVEYTVRDTDSGKYRSVTLMAPVSNSDMLYKCYEVIGQDERVRFKF 149
BLAST of mRNA_L-elsbetiae_contig751.16405.1 vs. uniprot
Match: A0A7S0NTF1_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NTF1_9EUKA) HSP 1 Score: 68.2 bits (165), Expect = 3.480e-11 Identity = 35/82 (42.68%), Postives = 54/82 (65.85%), Query Frame = 1 Query: 319 ALVEYPGSFDLKIIGVDDDTFVSDIRKAVAGCLTNGEDSLIKCSTREKGKYTSITIKVHVENSTQLYKCYEVINEDKRVKFK 564 +LVEYP +KIIGV++ FVSD+R AG +T E+ L+ R+KG + SIT+++ +++ +Y Y I++D RVKFK Sbjct: 71 SLVEYPCELSVKIIGVNEGAFVSDMRSLCAG-ITGQEEELVGVRWRDKGNFRSITLQLCFKDADMVYAVYAAIDKDPRVKFK 151
BLAST of mRNA_L-elsbetiae_contig751.16405.1 vs. uniprot
Match: A0A7S0CBH8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CBH8_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 4.360e-11 Identity = 38/87 (43.68%), Postives = 55/87 (63.22%), Query Frame = 1 Query: 307 QVLDALVEYPGSFDLKIIGVDDDTFVSDIRKAVAGCLTNGEDSLIKCSTREKGKYTSITIKVHVENSTQLYKCYEVINEDKRVKFKF 567 +V +ALVEYP F +KI+G +D TFV+D+ VA D+ + + R GK+ SIT+ V+++ LY YE I++D RVKFKF Sbjct: 186 RVFEALVEYPCEFQIKIVGANDGTFVTDMIALVAESCGVKSDA-VSWTERLNGKWVSITVNAPVQSAEMLYALYEDIDKDARVKFKF 271
BLAST of mRNA_L-elsbetiae_contig751.16405.1 vs. uniprot
Match: A0A7S2SR06_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR06_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 5.260e-9 Identity = 35/88 (39.77%), Postives = 54/88 (61.36%), Query Frame = 1 Query: 310 VLDALVEYPGSFDLKIIGVDDDTFVSDIRKAVAGCLTNGEDSLIKCSTRE--KGKYTSITIKVHVENSTQLYKCYEVINEDKRVKFKF 567 V + +++YP F++K+IG + F D+ A+ +T I STRE K+TS++IK V+ S LY+CYE +++D RVKFKF Sbjct: 84 VFERMLDYPCEFEIKVIGRLEGEFARDM-VAIISTVTGVPAMDIAFSTRETPNNKFTSVSIKATVQTSDMLYQCYEELDKDPRVKFKF 170 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig751.16405.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig751.16405.1 >prot_L-elsbetiae_contig751.16405.1 ID=prot_L-elsbetiae_contig751.16405.1|Name=mRNA_L-elsbetiae_contig751.16405.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=190bp MARISRAALMLSTLVRPMQAFLVTGPLAKAPFSSVSRAVLQAGKGFGDTPback to top mRNA from alignment at L-elsbetiae_contig751:2038..4430+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig751.16405.1 ID=mRNA_L-elsbetiae_contig751.16405.1|Name=mRNA_L-elsbetiae_contig751.16405.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2393bp|location=Sequence derived from alignment at L-elsbetiae_contig751:2038..4430+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig751:2038..4430+ >mRNA_L-elsbetiae_contig751.16405.1 ID=mRNA_L-elsbetiae_contig751.16405.1|Name=mRNA_L-elsbetiae_contig751.16405.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1140bp|location=Sequence derived from alignment at L-elsbetiae_contig751:2038..4430+ (Laminarionema elsbetiae ELsaHSoW15)back to top |