mRNA_L-elsbetiae_contig7484.16375.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7484.16375.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 5.150e-18 Identity = 112/240 (46.67%), Postives = 142/240 (59.17%), Query Frame = 2 Query: 11 MAKRDRREAPRGEEEETFDSLVDLSS-KQWAELLKDPLALERAAAKGNRALALRLVGAGAEIGNALFEAVDGGHKELVNDLVESGVPVAARDTDVWSPLHLAARLGCVEMVELLLAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVSIMCSGLFKTSVVHMAAEWGYLEILRAVIEHGADLEVADEPNYR--TALHCAATRDRVEAIHVLVEAGANIEAQGNGGRTPLHYAA 721 MA R A RGEEE FD + + KQWA L++ LE AA +G+ L +LV AGAEIG A+ AV GGH ++ L+ESG +A D + +PL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D++ G + S + + A G+++ +R +IEHGAD+ D NY ALH A ++VEA+ VL+ AGAN + G T LH AA Sbjct: 1 MANECARGALRGEEERIFDLAAETCTPKQWAGLMQP--FLEHAAGRGHEHLTRKLVEAGAEIGTAVHAAVRGGHCDITEFLLESGASASASDEEGLTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRY-GDREISALDIGAGEGHVDFIRTLIEHGADV---DATNYGGVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAA 234
BLAST of mRNA_L-elsbetiae_contig7484.16375.1 vs. uniprot
Match: D8LL12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL12_ECTSI) HSP 1 Score: 90.1 bits (222), Expect = 2.090e-17 Identity = 101/195 (51.79%), Postives = 133/195 (68.21%), Query Frame = 2 Query: 5 NPMAKRDRREAPRGEEEETFDSLVD-LSSKQWAELLKDPLALERAAAKGNRALALRLVGAGAEIGNALFEAVDGGHKELVNDLVESGVPVAARDTDVWSPLHLAARLGCVEMVELLLAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVSIMCSGLFKTSVVHMAAEWGYLEILRAVIEHGADLEVAD 586 N +A R A +G E ETFD + L++ WAE+L+ PL E AAA+GN AL +L+ AGA++G+AL AV GH E+V +L+E G V+ +DT +PL +A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DV++ C GL K +V+ +AAE G+++ILRA+++HGAD+ D Sbjct: 15 NALANEQGRRALKGAEGETFDLFSEVLTTHGWAEMLQFPL--ECAAAQGNVALTQKLLRAGADMGSALHAAVRYGHAEVVTNLLEHGACVSIKDTRGSTPLQVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVNVRC-GLLKRTVLSLAAEKGHVDILRALVKHGADVTAVD 206
BLAST of mRNA_L-elsbetiae_contig7484.16375.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 89.0 bits (219), Expect = 7.440e-17 Identity = 100/169 (59.17%), Postives = 118/169 (69.82%), Query Frame = 2 Query: 80 LSSKQWAELLKDPLALERAAAKGNRALALRLVGAGAEIGNALFEAVDGGHKELVNDLVESGVPVAARDTDVWSPLHLAARLGCVEMVELLLAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVSIMCSGLFKTSVVHMAAEWGYLEILRAVIEHGADLEVAD 586 L+S+Q AELL+ LE AAAKGN+ LA RLV AGAEIG+AL AVDGGH+E+V+DL+ES +AA D D +PL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++ S FK H AA G++EILRA+IEHGAD++ D Sbjct: 9 LTSQQLAELLR--ALLEHAAAKGNKDLAQRLVRAGAEIGDALHRAVDGGHREIVSDLLESEASLAATDMDGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLR-STQFKCPATHAAALEGHVEILRAIIEHGADVDAVD 174
BLAST of mRNA_L-elsbetiae_contig7484.16375.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI) HSP 1 Score: 70.1 bits (170), Expect = 2.700e-10 Identity = 104/229 (45.41%), Postives = 135/229 (58.95%), Query Frame = 2 Query: 29 REAPRGEEEETFDSLVDLSSK-QWAELLKDPLALERAAAKGNRALALRLVGAGAEIGN-ALFEAVDGGHKELVNDLVESGVPVAARDTDVWSPLHLAARLGCVEMVELLLAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVSIMCSGLFKTSVVHMAAEWGYLEILRAVIEHGADLEVADEPNYRTALHCAATRDRVEAIHVLVEAGANIEAQGNGGRTPL 709 +E +GEEE D ++D + +E L PL E A A+G+ LA +LV AGA+IG AL EAV GH + L+E+G V + D +P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +++ + F S + AA +EILR +I+HG ++ +A + TALH AA +R AI VLV AGA+I+A+ G PL Sbjct: 16 KETLKGEEERVLDLMLDTRCPHEMSEWLAAPL--ESAVARGDEGLAQKLVQAGAKIGGVALHEAVRRGHIAIAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLNE-FDMSFLDFAASSQDVEILRMLIDHGMEVNLAAA--FGTALHWAAKANRANAIDVLVGAGADIQARNMSGSRPL 239
BLAST of mRNA_L-elsbetiae_contig7484.16375.1 vs. uniprot
Match: A0A6H5JN15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN15_9PHAE) HSP 1 Score: 69.7 bits (169), Expect = 5.340e-10 Identity = 40/77 (51.95%), Postives = 54/77 (70.13%), Query Frame = 2 Query: 500 SVVHMAAEWGYLEILRAVIEHGADLEVADEPNYRTALHCAATRDRVEAIHVLVEAGANIEAQG--NGGR-TPLHYAA 721 S + +AA G++E+++A+I HG D++ D N TALH AAT D V AI L+EAGANI+AQG +G R TPLH A+ Sbjct: 152 SALGLAARGGHVEVMQALIRHGVDVDAPDS-NGLTALHSAATGDAVGAIETLMEAGANIDAQGGEDGARYTPLHMAS 227
BLAST of mRNA_L-elsbetiae_contig7484.16375.1 vs. uniprot
Match: UPI00140F95BA (protein phosphatase 1 regulatory subunit 16A isoform X2 n=1 Tax=Rhinolophus ferrumequinum TaxID=59479 RepID=UPI00140F95BA) HSP 1 Score: 67.8 bits (164), Expect = 2.030e-9 Identity = 51/176 (28.98%), Postives = 82/176 (46.59%), Query Frame = 2 Query: 200 ALFEAVDGGHKELVNDLVESGVPVAARDTDVWSPLHLAARLGCVEMVELLLAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVSIMCSGLFKTSVVHMAA--EWGYLEILRAVIEHGADLEVADEPNYRTALHCAATRDRVEAIHVLVEAGANIEAQGNGGRTPLHYAA 721 AL ++ +E+V L+E+G V ARD++ W+PLH AA G + +VELL+A+ + ++ G+ + S+ A E LE +++++ GADL+ + T LH AA EA +L+E GA++ A+ G PLH AA Sbjct: 107 ALHQSCIDDFREMVQQLLEAGAKVNARDSECWTPLHAAATCGHLHLVELLIARGADLLAVNTDGNMPYDLCEDEQTLDFL--------ETAMANRGITQDSIEAARALPERHMLEDFQSLLQSGADLDAPGDHG-ATLLHIAAANGFSEAAALLLEHGASLSAKDRDGWEPLHAAA 273
BLAST of mRNA_L-elsbetiae_contig7484.16375.1 vs. uniprot
Match: D7G744_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G744_ECTSI) HSP 1 Score: 65.1 bits (157), Expect = 1.820e-8 Identity = 96/215 (44.65%), Postives = 119/215 (55.35%), Query Frame = 2 Query: 119 LALERAAAKGNRALALRLVGAGAEIGNALFEAVDGGHKELVNDLVESGVPVAARDTDVWSPLHLAARLGCVEMVELLLAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVSIMCSGLFKTSVVHMAAEWGYLEILRAVIEHGADLEVADEPNYRTALHC----------AATRDRVEAIHVLVEAGANIEAQG----NGGRTPLHYAA 721 +A AA GN L +L GAGA G+AL A+ G L DL+ G P A+ ++ + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D S+ C S + +AA G++E+++A+I HGAD+ D N TALH AA D+V AI L+EAGANI QG + TPLH A+ Sbjct: 1 MAANSAAGAGNLDLVTKLQGAGAG-GSALHLALRAGQDALARDLLRLGAPTKAKSSNGDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDPSLRCGKDEAFSTLGLAARGGHVEVMQALIRHGADVNAPDS-NGCTALHTXXXXXXXXXSAAIGDKVGAIDTLIEAGANINVQGGKYDDARSTPLHMAS 213
BLAST of mRNA_L-elsbetiae_contig7484.16375.1 vs. uniprot
Match: A0A6H5KSG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG6_9PHAE) HSP 1 Score: 61.6 bits (148), Expect = 4.670e-8 Identity = 61/133 (45.86%), Postives = 81/133 (60.90%), Query Frame = 2 Query: 296 SPLHLAARLGCVEMVELLLAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVSIMCSGLFKTSVVHMAAEWGYLEILRAVIEHGADLEVADEPNYRTALHCAATRDRVEAIHVLVEAGANIEAQGNG 694 +PLHLAA LGC +M+ L+L + XXXXXXXXXXXXXXXXXXX D+S+ SG S + AA G ++++RA++ HG D+ D TALH A ++ AI LVEAGA++ A+G G Sbjct: 4 TPLHLAAGLGCDDMMPLILQQGAVVDALDNQRRXXXXXXXXXXXXXXXXXXXAAGADLSLR-SGDNNESALETAAINGDVDVVRAMVRHGVDVNARDSQGL-TALHAVAESNQAGAIDALVEAGAHVNARGRG 134
BLAST of mRNA_L-elsbetiae_contig7484.16375.1 vs. uniprot
Match: A0A0G2HMH3_9PEZI (Putative ankyrin repeat protein n=1 Tax=Diaporthe ampelina TaxID=1214573 RepID=A0A0G2HMH3_9PEZI) HSP 1 Score: 60.5 bits (145), Expect = 1.540e-7 Identity = 32/79 (40.51%), Postives = 50/79 (63.29%), Query Frame = 2 Query: 497 TSVVHMAAEWGYLEILRAVIEHGADLEVADEPNYR--TALHCAATRDRVEAIHVLVEAGANIEAQGNGGRTPLHYAASH 727 T+ +H AA +GYL+ +R ++EHGAD+ A PN+ T +H AA++ RVEAI +L ++GA + + G+TP H Sbjct: 123 TAALHTAAGFGYLDTMRLLMEHGADVNEAI-PNWLDWTPMHFAASKGRVEAIKLLEQSGARSDLKDKDGKTPAQLLEEH 200
BLAST of mRNA_L-elsbetiae_contig7484.16375.1 vs. uniprot
Match: A0A163R4V5_9BACI (Uncharacterized protein n=1 Tax=Fictibacillus phosphorivorans TaxID=1221500 RepID=A0A163R4V5_9BACI) HSP 1 Score: 58.9 bits (141), Expect = 3.430e-7 Identity = 34/79 (43.04%), Postives = 50/79 (63.29%), Query Frame = 2 Query: 500 SVVHMAAEWGYLEILRAVIEHGADLEVADEPNY-RTALHCAAT--RDRVEAIHVLVEAGANIEAQGNGGRTPLHYAASH 727 S +H+AA +G+++I+R ++E GAD+ V N T LH AA ++R E I +L+ GA+I Q +GG T LH AA H Sbjct: 44 SPLHLAAHFGHIDIVRLLLEKGADVHVKSGNNMANTPLHAAAANMKNRQEMIGLLLANGADINEQQSGGWTILHQAAQH 122 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7484.16375.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7484.16375.1 >prot_L-elsbetiae_contig7484.16375.1 ID=prot_L-elsbetiae_contig7484.16375.1|Name=mRNA_L-elsbetiae_contig7484.16375.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=240bp MAKRDRREAPRGEEEETFDSLVDLSSKQWAELLKDPLALERAAAKGNRALback to top mRNA from alignment at L-elsbetiae_contig7484:6950..7679+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7484.16375.1 ID=mRNA_L-elsbetiae_contig7484.16375.1|Name=mRNA_L-elsbetiae_contig7484.16375.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=730bp|location=Sequence derived from alignment at L-elsbetiae_contig7484:6950..7679+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7484:6950..7679+ >mRNA_L-elsbetiae_contig7484.16375.1 ID=mRNA_L-elsbetiae_contig7484.16375.1|Name=mRNA_L-elsbetiae_contig7484.16375.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1440bp|location=Sequence derived from alignment at L-elsbetiae_contig7484:6950..7679+ (Laminarionema elsbetiae ELsaHSoW15)back to top |