prot_L-elsbetiae_contig7391.16269.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7391.16269.1
Unique Nameprot_L-elsbetiae_contig7391.16269.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length608
Homology
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BLAST of mRNA_L-elsbetiae_contig7391.16269.1 vs. uniprot
Match: D7FI73_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI73_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 1.580e-5
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 0 
Query:    3 SKCHHVGCTKHPGYGASGSKTAEFCSEHKKEGMVNVRNR 41
            S+C H  CTK P YG +GSK  EFCS+H ++GMVNV N+
Sbjct:    2 SQCGHANCTKRPTYGVAGSKKREFCSQHARDGMVNVNNK 40
[Close]
BLAST of mRNA_L-elsbetiae_contig7391.16269.1 vs. uniprot
Match: A0A6H5JT00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT00_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 3.850e-5
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 0 
Query:    3 SKCHHVGCTKHPGYGASGSKTAEFCSEHKKEGMVNVRNR 41
            S+C H  CTK P YG +GSK  EFCS+H ++GMVNV N+
Sbjct:   62 SQCGHENCTKRPTYGVAGSKKREFCSQHARDGMVNVNNK 100
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7391.16269.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FI73_ECTSI1.580e-558.97EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JT00_9PHAE3.850e-558.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7391contigL-elsbetiae_contig7391:2957..8525 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7391.16269.1mRNA_L-elsbetiae_contig7391.16269.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7391 2842..8676 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7391.16269.1 ID=prot_L-elsbetiae_contig7391.16269.1|Name=mRNA_L-elsbetiae_contig7391.16269.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=608bp
MPSKCHHVGCTKHPGYGASGSKTAEFCSEHKKEGMVNVRNRKCAHHGCTK
QPNYGAAGSQKREFCSGHKKEGMVNISNKKCAHHGCTKQPNFGAAGSQKR
EFCAGHKKEGMVNISNKRCAHHGCTKHPAYGAAGTKKPEFCFGHKRDGMV
NVRNRKCTHHGCTTRASYGISGTKTAEFCSGHKKDGMVDVKNRKCAHHGC
VKQPYYGIAGTKVAEFCSKHKKDGMVDVFNKRCAHHGCTKHPNYGAAGTK
TAKFCSEHKKDGMVDVFRKTCTHHGCTKWPSYGVAGTKVAEFCSGHKKEG
MVDVFSKRCIHHGCTKQPAFGVAGTKVAEFCSGHKKEGMVDVLSKRCIHH
GCTKQPAFGVAGTRTAEFCSGHKKDGMVNVRNKICTRHGCTKWSSYGVAG
RKTAEFCSEHKKEGMVNISKKKCVHHGCAKQPNYGVAGTKTGEFCSEHQK
EGMVDVKNSRCNYATCTHPSSHGIIGTTKRKLCGQHAERDMAHHTPSNYR
SSVGARGDSGSKHDRDRVAVDDDGTAHGTGAGQERKGRASSSEQTEVFSS
KRARQAPVDPPTAPHPSETPIDEGPSPEEDASVSGPGDAAVKMEAGMFCI
GRRGSWR*
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