prot_L-elsbetiae_contig7255.16120.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7255.16120.1
Unique Nameprot_L-elsbetiae_contig7255.16120.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length286
Homology
BLAST of mRNA_L-elsbetiae_contig7255.16120.1 vs. uniprot
Match: D7G4L8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4L8_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 1.900e-74
Identity = 152/293 (51.88%), Postives = 177/293 (60.41%), Query Frame = 0
Query:    1 MFRSANDAKSRFIHKHIRAATALAQ--ASPE-GHEVGMGVPLPRHWGGPPGIPMAKFSQPLAVMATEAALEDLKRNQRGERKRDQSSXXXXXXXXXXXXXQQRSGAST--STASRRARLLEQSQSDGQIRLDNAKHCHDHNSQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---AVILPQGGGLILVGEDTVRLSKFPRGCERVPGAEGASGKRMQAISEQSNAGDGCGEDVLTRLCNPKHFTGTAATGHLPSVVDLEGGVGVLLKGASSEVKDHIGAQEVSWRLRLAERL 285
            +F+SANDAKSRFIHKHIRAATAL+   +SPE G  +GM  PLPRHWGGPP  P AK + P+AVMATEAALED ++ +R ER RD  S               +S  S     ++R ARL      D  +      HC   + +H                                AVILP+GGGL+L+GED VR SKFPRGCE +  A  AS      + E  ++G+   +DVL RLCNPKHFTGTAATGHLP VVDLEGGVGVLLKGAS  VKDHIG QEVSWRLRLAERL
Sbjct:   15 LFKSANDAKSRFIHKHIRAATALSHTSSSPEVGEGMGMPEPLPRHWGGPPEFPRAKVAAPVAVMATEAALEDYRQRRRAERIRDHRSLGSRSKSQGPGPEGVKSLTSVVPKASARGARLQRGRSEDSFVVGKKTNHCEHPSPRHPHQHLRHHPHPCQRGGHNSDQRQPKHRPPSTHAVILPKGGGLVLIGEDGVRKSKFPRGCE-LSAAAMASVATTPPL-ESKSSGESEDDDVLARLCNPKHFTGTAATGHLPVVVDLEGGVGVLLKGASIAVKDHIGKQEVSWRLRLAERL 305          
BLAST of mRNA_L-elsbetiae_contig7255.16120.1 vs. uniprot
Match: A0A6H5KLC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLC7_9PHAE)

HSP 1 Score: 204 bits (519), Expect = 1.450e-60
Identity = 147/292 (50.34%), Postives = 167/292 (57.19%), Query Frame = 0
Query:    1 MFRSANDAKSRFIHKHIRAAT-ALAQASPE-GHEVGMGVPLPRHWGGPPGIPMAKFSQPLAVMATEAALEDLKRNQRGERKRDQSSXXXXXXXXXXXXXQQRSGAST-STASRRARLLEQSQSDGQIRLDNAKHCHDHNS----QHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVILPQGGGLILVGEDTVRLSKFPRGCERVPGAEGASGKRMQAISEQSNAGDGCGEDVLTRLCNPKHFTGTAATGHLPSVVDLEGGVGVLLKGASSEVKDHIGAQEVSWRLRLAERL 285
            +F+SANDAKSRFI+KHIRAAT A   +SPE G  +G   PLPRH  GPP  P AK + P+AVMATEAALED ++ +R E  RD                  +S AS    AS R   L + +SD    +    +  +H S          XXXXXXX                  AVILP+GGGL+L+GED VR SKFPRGCE  P +                       DVL RLCNPKHFTGTAATG LP VVDLE GVGVLLKGAS  VKDHIG QEVSWRLRLAERL
Sbjct:   43 LFKSANDAKSRFINKHIRAATLAHTSSSPEVGEGMGRQEPLPRHCSGPPEFPRAKVAAPVAVMATEAALEDYRQRRRAEIIRDHRGPGSKSEPQGPGPEGLKSLASAVPKASARGASLRRGRSDDGFVVSKKTNQREHPSPRHPHQYLRHXXXXXXXGEHNSDQPQPKQRSPSTHAVILPKGGGLVLIGEDGVRKSKFPRGCE--PSSATXXXXXXXXXXXXXXXXXXXXXDVLARLCNPKHFTGTAATGRLPVVVDLERGVGVLLKGASIAVKDHIGKQEVSWRLRLAERL 332          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7255.16120.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4L8_ECTSI1.900e-7451.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLC7_9PHAE1.450e-6050.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7255contigL-elsbetiae_contig7255:3212..5467 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7255.16120.1mRNA_L-elsbetiae_contig7255.16120.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7255 3194..5467 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7255.16120.1 ID=prot_L-elsbetiae_contig7255.16120.1|Name=mRNA_L-elsbetiae_contig7255.16120.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=286bp
MFRSANDAKSRFIHKHIRAATALAQASPEGHEVGMGVPLPRHWGGPPGIP
MAKFSQPLAVMATEAALEDLKRNQRGERKRDQSSRGRRKIDNSARQRQQR
SGASTSTASRRARLLEQSQSDGQIRLDNAKHCHDHNSQHHHHINSDRRHP
RKHCQQQQQQQNRPPSTHAVILPQGGGLILVGEDTVRLSKFPRGCERVPG
AEGASGKRMQAISEQSNAGDGCGEDVLTRLCNPKHFTGTAATGHLPSVVD
LEGGVGVLLKGASSEVKDHIGAQEVSWRLRLAERL*
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