prot_L-elsbetiae_contig7243.16108.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7243.16108.1
Unique Nameprot_L-elsbetiae_contig7243.16108.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length209
Homology
BLAST of mRNA_L-elsbetiae_contig7243.16108.1 vs. uniprot
Match: D7FU20_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU20_ECTSI)

HSP 1 Score: 343 bits (881), Expect = 1.430e-114
Identity = 171/223 (76.68%), Postives = 182/223 (81.61%), Query Frame = 0
Query:    1 RRTQARKEVWGGPGWTVD---------GGAPCGG--KTPRGSPNGGAP----DTSAAASDEATGIPLLATVEVYLCLLNGSSKRRLRVTCPEVECCPPECILLGAGANEANGTYELAGFRNGAPVYTKGKDDVTIAKECLGGREGWIIGRPPNHVLYGQPADTDLPPELHWALMNGGTGFNPPPTLMMHSHRRAKETHMDIREMLTPRACWAIPANVTFPDDT 208
            R+  ARKEVWGGPGW+VD         GG  C G  KTPR SPN G      D  A A DEA GI L+  VEVYLCLL+GSSKRRLRVTCP++E CPPECILLGAGANEANGTYELAGFRNGAP YT GKDDVTIAKECLGGREGWIIGRPPN+VLYGQP +TDLPPELHWALMNGGTG NPPPTLMMHSHRRAKE  +DIR+M TPRA WAIPA+VTFPDDT
Sbjct:  221 RKMTARKEVWGGPGWSVDDVGGGDGGDGGVSCSGGTKTPRNSPNNGGAAXXADAPAPADDEAGGISLVGRVEVYLCLLDGSSKRRLRVTCPDIERCPPECILLGAGANEANGTYELAGFRNGAPFYTNGKDDVTIAKECLGGREGWIIGRPPNYVLYGQPVNTDLPPELHWALMNGGTGLNPPPTLMMHSHRRAKERLVDIRQMPTPRARWAIPADVTFPDDT 443          
BLAST of mRNA_L-elsbetiae_contig7243.16108.1 vs. uniprot
Match: A0A6H5KR82_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR82_9PHAE)

HSP 1 Score: 317 bits (812), Expect = 1.350e-96
Identity = 161/225 (71.56%), Postives = 171/225 (76.00%), Query Frame = 0
Query:    1 RRTQARKEVWGGPGWTVDG-----------------GAPCGGKTPRGSPNGGAPDTSAAASDEATGIPLLATVEVYLCLLNGSSKRRLRVTCPEVECCPPECILLGAGANEANGTYELAGFRNGAPVYTKGKDDVTIAKECLGGREGWIIGRPPNHVLYGQPADTDLPPELHWALMNGGTGFNPPPTLMMHSHRRAKETHMDIREMLTPRACWAIPANVTFPDDT 208
            R+  ARKEVWGGPGW+VD                                 GA D  AAA DEA GI L+  VEVYLCLL+GSSKRRLRV CP++E CPPECILLGAGANEANGTYELAGFRNGAP YT  KDDVTIAKECLGGREGWIIGRPPN+VLYGQP +TDLPPELHWALMNGGTG NPPPTLMMHSHRRAKE  MDIR+M TPRA WAIPA+VTFPDDT
Sbjct: 1365 RKMTARKEVWGGPGWSVDDVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGA-DAPAAADDEADGISLVGRVEVYLCLLDGSSKRRLRVNCPDIERCPPECILLGAGANEANGTYELAGFRNGAPFYTNDKDDVTIAKECLGGREGWIIGRPPNYVLYGQPVNTDLPPELHWALMNGGTGLNPPPTLMMHSHRRAKERLMDIRQMPTPRARWAIPADVTFPDDT 1588          
BLAST of mRNA_L-elsbetiae_contig7243.16108.1 vs. uniprot
Match: A0A835YWH6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWH6_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.710e-38
Identity = 74/155 (47.74%), Postives = 97/155 (62.58%), Query Frame = 0
Query:   56 VEVYLCLLNGSSKRRLRVTCPEVECCPPECILLGAGANEANGTYELAGFRNGAPVYTKGKDDVTIAKECLGGREGWIIGRPPNHVLYGQPADTDLPPELHWALMNGGTGFNPPPTLMMHSHRRAKETHMDIREMLTPR----ACWAIPANVTFPD 206
            +EVYL L +G+ KRRL +T P VE  PP+CI LGAG+  ANGT++L G+R+GAP YT     VTI +  L GR GW++ + P+ V Y     +  PP+LHW L++ G G  PPPTLM    +R KE  +DIRE+ TPR    A    PA+   PD
Sbjct:  209 MEVYLSLPDGACKRRLAITSPLVETAPPQCIALGAGSAAANGTFDLTGWRHGAPFYTNTASGVTIGRVELEGRAGWVMRKEPHKVYYCCTEASAHPPDLHWTLVSMGDGNEPPPTLMTSYQKRVKERPVDIRELPTPRWHPDASHFSPADAMLPD 363          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7243.16108.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FU20_ECTSI1.430e-11476.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KR82_9PHAE1.350e-9671.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YWH6_9STRA1.710e-3847.74Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7243contigL-elsbetiae_contig7243:4379..9939 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7243.16108.1mRNA_L-elsbetiae_contig7243.16108.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7243 4322..9939 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7243.16108.1 ID=prot_L-elsbetiae_contig7243.16108.1|Name=mRNA_L-elsbetiae_contig7243.16108.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=209bp
RRTQARKEVWGGPGWTVDGGAPCGGKTPRGSPNGGAPDTSAAASDEATGI
PLLATVEVYLCLLNGSSKRRLRVTCPEVECCPPECILLGAGANEANGTYE
LAGFRNGAPVYTKGKDDVTIAKECLGGREGWIIGRPPNHVLYGQPADTDL
PPELHWALMNGGTGFNPPPTLMMHSHRRAKETHMDIREMLTPRACWAIPA
NVTFPDDT*
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