prot_L-elsbetiae_contig7188.16024.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7188.16024.1
Unique Nameprot_L-elsbetiae_contig7188.16024.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length65
Homology
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BLAST of mRNA_L-elsbetiae_contig7188.16024.1 vs. uniprot
Match: A0A6H5L740_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L740_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 1.630e-7
Identity = 24/42 (57.14%), Postives = 29/42 (69.05%), Query Frame = 0 
Query:   13 LQVQVDHCLPDSCKHPCVSAVGSCCGPEGMGGFGSPRETAAP 54
            +QVQVDHC+   CKHPCVSAVG CCGP  M    +P+   +P
Sbjct:  191 IQVQVDHCVDSRCKHPCVSAVGGCCGPTAMSARPAPQCALSP 232
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BLAST of mRNA_L-elsbetiae_contig7188.16024.1 vs. uniprot
Match: D7FQH9_ECTSI (Cation efflux family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQH9_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 1.150e-6
Identity = 22/37 (59.46%), Postives = 27/37 (72.97%), Query Frame = 0 
Query:   13 LQVQVDHCLPDSCKHPCVSAVGSCCGPEGMGGFGSPR 49
            +QVQVDHC+   CKHPCVSAVG CCGP  +    +P+
Sbjct:  475 IQVQVDHCVDSRCKHPCVSAVGGCCGPTAISARPAPQ 511
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7188.16024.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L740_9PHAE1.630e-757.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQH9_ECTSI1.150e-659.46Cation efflux family protein n=1 Tax=Ectocarpus si... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7188contigL-elsbetiae_contig7188:4150..4344 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7188.16024.1mRNA_L-elsbetiae_contig7188.16024.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7188 3469..4597 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7188.16024.1 ID=prot_L-elsbetiae_contig7188.16024.1|Name=mRNA_L-elsbetiae_contig7188.16024.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=65bp
MSTPRPSFSIVFLQVQVDHCLPDSCKHPCVSAVGSCCGPEGMGGFGSPRE
TAAPPASAPWTNGS*
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