mRNA_L-elsbetiae_contig7182.16020.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7182.16020.1 vs. uniprot
Match: D8LQC4_ECTSI (B30.2/SPRY domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQC4_ECTSI) HSP 1 Score: 341 bits (875), Expect = 9.840e-115 Identity = 182/291 (62.54%), Postives = 203/291 (69.76%), Query Frame = 1 Query: 1 AMGPPPRHQQHQQA------DESSSMDEMDTSPGGXXXXXXXXXFEAKGWGPXXXXXXXXXXXXXHDREFFENGEYLPSRIDTTKNSYHVVCDRDKLGVRYRGQGNHAKDWGTVRANHPLPRRRRVSYFEITIAAMGDLCNITIGLVPDSFPMDKQPGAEGASYGLEGASGEALSGGPRGPNFANSISTGDTVGLGVNFKKREAFLTHNGRLLGSAFPGIRCALDAAGLYPCVGLHGPGEAVRINFGQRPFLFDLGASVKREDVREQAAVAAVPVCPSLLRSLVRDYLLHQ 855 AMGPP R Q ++SS DEMDTSP AK W P FENGEYLPS +DTT+ YH VCDRDKLGVRYRGQG+H +DWGTVRANHPLPR +R+ YFE TIAA G+ C IT+GL+P SFP+++QPG EG SYGLEG +G+ SG G F TGDTVGLGVNFKK E FLTHNGRLLG+AFP IRCALD GLYPCVGLH GEAV +NFG+RP+LFD+ ASV ED REQAAVAAVPVCP LLRSLVRDYLLHQ Sbjct: 9 AMGPPSRRQHXXXXXXXXXPSDTSSADEMDTSPD-ISPRSGDGLGGAKRWPPAEEHGGAAAGV-------FENGEYLPSAMDTTQPCYHAVCDRDKLGVRYRGQGHHEQDWGTVRANHPLPRHQRMWYFEATIAAQGENCCITLGLIPASFPVNRQPGTEGGSYGLEG-NGKVFSGSGVGQTFGAPFCTGDTVGLGVNFKKMEVFLTHNGRLLGAAFPTIRCALDVHGLYPCVGLHSRGEAVHLNFGRRPYLFDVSASVAGEDYREQAAVAAVPVCPVLLRSLVRDYLLHQ 290
BLAST of mRNA_L-elsbetiae_contig7182.16020.1 vs. uniprot
Match: A0A6H5JHG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHG5_9PHAE) HSP 1 Score: 338 bits (868), Expect = 4.020e-105 Identity = 181/291 (62.20%), Postives = 203/291 (69.76%), Query Frame = 1 Query: 1 AMGPPPRHQQHQ------QADESSSMDEMDTSPGGXXXXXXXXXFEAKGWGPXXXXXXXXXXXXXHDREFFENGEYLPSRIDTTKNSYHVVCDRDKLGVRYRGQGNHAKDWGTVRANHPLPRRRRVSYFEITIAAMGDLCNITIGLVPDSFPMDKQPGAEGASYGLEGASGEALSGGPRGPNFANSISTGDTVGLGVNFKKREAFLTHNGRLLGSAFPGIRCALDAAGLYPCVGLHGPGEAVRINFGQRPFLFDLGASVKREDVREQAAVAAVPVCPSLLRSLVRDYLLHQ 855 AMGPP R Q Q ++ S DEMDTSP AK W P FENGEYLPS +DTT+ YH VC RDKLGVRYRGQG+H +DWGTVRANHPLPR +R+ YFE TIAA G+ C IT+GL+P SFPM++QPG EG SYGLEG +G+ SG G F + TGDTVGLGVNFKK E FLTHNGRLLGSAFP IR ALD GLYPCVGLH GEAV +NFG+RP+LF++ ASV +ED REQAAVAAVPVCP LLRSLVRDYLLHQ Sbjct: 9 AMGPPSRRQHXXXXXXXXQPSDTLSADEMDTSPD-ISPRRVDGLGGAKRWPPAEEHGDVAAGV-------FENGEYLPSAMDTTQPCYHAVCARDKLGVRYRGQGHHEQDWGTVRANHPLPRHQRMWYFEATIAAQGENCCITLGLIPASFPMNRQPGTEGGSYGLEG-NGKVFSGSGVGQTFGDPFCTGDTVGLGVNFKKMEGFLTHNGRLLGSAFPAIRSALDVHGLYPCVGLHSRGEAVHLNFGRRPYLFNVSASVAKEDYREQAAVAAVPVCPVLLRSLVRDYLLHQ 290
BLAST of mRNA_L-elsbetiae_contig7182.16020.1 vs. uniprot
Match: A0A8J9WNV4_9CHLO (Ran-binding protein 10 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WNV4_9CHLO) HSP 1 Score: 178 bits (452), Expect = 6.730e-49 Identity = 90/219 (41.10%), Postives = 128/219 (58.45%), Query Frame = 1 Query: 196 ENGEYLPSRIDTTKNSYHVVCDRDKLGVRYRGQGNHAKDWGTVRANHPLPRRRRVSYFEITIAAMGDLCNITIGLVPDSFPMDKQPGAEGASYGLEGASGEALSGGPRGPNFANSISTGDTVGLGVNFKKREAFLTHNGRLLGSAFPGIRCALDAAGLYPCVGLHGPGEAVRINFGQRPFLFDLGASVKREDVREQAAVAAVPVCPSLLRSLVRDYLLH 852 E E LPS +T + ++DKL VRY GQGNH D G ++ N P+PR+RRV Y+E+T+ G I +G +F M KQPG E SYG G G+ +G ++ S GD +G G++ +++E F T NG+ LG+AF G L LYP +GLH PGE + +NFG PF F L A ++ E +++AAV ++P+ + LVR+YLLH Sbjct: 20 EEEEPLPSHFNTNNFGNFLDVEKDKLTVRYTGQGNHNNDVGAIQGNRPVPRKRRVYYYEVTVLDAGSKGLIGVGFADKNFKMGKQPGWEQHSYGYHGDDGKKFHASGQGEDYGPHFSAGDVIGAGIHIQRQEIFFTKNGKNLGTAFRG----LTQLPLYPTIGLHSPGECIVVNFGASPFAFKLDAMLEEEREQQEAAVQSIPIPAGVTHRLVREYLLH 234
BLAST of mRNA_L-elsbetiae_contig7182.16020.1 vs. uniprot
Match: A0A2R6XUI5_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XUI5_MARPO) HSP 1 Score: 175 bits (443), Expect = 5.500e-48 Identity = 90/217 (41.47%), Postives = 129/217 (59.45%), Query Frame = 1 Query: 205 EYLPSRIDTTKNSYHVVCDRDKLGVRYRGQGNHAKDWGTVRANHPLPRRRRVSYFEITIAAMGDLCNITIGLVPDSFPMDKQPGAEGASYGLEGASGEALSGGPRGPNFANSISTGDTVGLGVNFKKREAFLTHNGRLLGSAFPGIRCALDAAG-LYPCVGLHGPGEAVRINFGQRPFLFDLGASVKREDVREQAAVAAVPVCPSLLRSLVRDYLLH 852 E +P+ ++TT + +V DKL RY G G H D G +++N P P +R + YFEI++ G I+IG ++F M +QPG E SYG G G G RG +F + +TGDTVG G+N+ +E F T NG+L+G+ + G LYP +GLH P E V +NFGQ+PF+FD+ A V+ E R Q +V +VP+ S+ ++VR YLLH Sbjct: 35 EEVPTHLNTTTCGHFLVISTDKLSARYNGDGQHGHDVGAIQSNRPAPHQRLLYYFEISLKDRGQRGVISIGFTDENFKMSRQPGWEPNSYGYHGDDGLLYHGRGRGDSFGPTFTTGDTVGAGINYAAQELFFTKNGKLVGTHIK------EGKGPLYPTIGLHSPSEKVEVNFGQKPFIFDIEAMVQEERERRQRSVESVPLPLSISHNVVRTYLLH 245
BLAST of mRNA_L-elsbetiae_contig7182.16020.1 vs. uniprot
Match: A0A1Y1I3W8_KLENI (Spla ryanodine receptor domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I3W8_KLENI) HSP 1 Score: 174 bits (441), Expect = 2.120e-47 Identity = 95/216 (43.98%), Postives = 122/216 (56.48%), Query Frame = 1 Query: 205 EYLPSRIDTTKNSYHVVCDRDKLGVRYRGQGNHAKDWGTVRANHPLPRRRRVSYFEITIAAMGDLCNITIGLVPDSFPMDKQPGAEGASYGLEGASGEALSGGPRGPNFANSISTGDTVGLGVNFKKREAFLTHNGRLLGSAFPGIRCALDAAGLYPCVGLHGPGEAVRINFGQRPFLFDLGASVKREDVREQAAVAAVPVCPSLLRSLVRDYLLH 852 E PS ++T + +DKL VRY G G H D G+++AN P+PR R + YFE+T+ GD I IG ++F +QPG E SYG G G+A RG + + +TGD VG GVN +E F T NG+ LG AF +R L YP VGLH E V +NFG+RPF FDL A V+ E R Q AV V + S+ S+VR YLLH Sbjct: 75 EEAPSELNTRNYGGFLEVGKDKLSVRYTGHGQHGHDVGSIQANRPVPRERLLYYFELTVRDRGDRNCIAIGFTDENFKHSRQPGWEAGSYGYHGDDGKAYHASGRGDAYGPTFTTGDVVGAGVNHATQEIFFTKNGKHLGVAFADVREIL-----YPTVGLHSKNERVEVNFGKRPFKFDLEALVQEERERRQRAVELVEMPSSISHSIVRGYLLH 285
BLAST of mRNA_L-elsbetiae_contig7182.16020.1 vs. uniprot
Match: A0A8J4BYU5_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4BYU5_9CHLO) HSP 1 Score: 162 bits (409), Expect = 7.950e-43 Identity = 84/213 (39.44%), Postives = 119/213 (55.87%), Query Frame = 1 Query: 214 PSRIDTTKNSYHVVCDRDKLGVRYRGQGNHAKDWGTVRANHPLPRRRRVSYFEITIAAMGDLCNITIGLVPDSFPMDKQPGAEGASYGLEGASGEALSGGPRGPNFANSISTGDTVGLGVNFKKREAFLTHNGRLLGSAFPGIRCALDAAGLYPCVGLHGPGEAVRINFGQRPFLFDLGASVKREDVREQAAVAAVPVCPSLLRSLVRDYLLH 852 PS +++ + + + +DK VRY H+ D G ++ANHP+P V Y+E+T+ G I IG SF + +QPG E SYG G G+ G G ++ + TGDTVG G++ ++E F T NG L A +R AGLYP +GLH GE V++NFGQ+PF+FDL + E ++AAV +PV + LVR YLLH Sbjct: 12 PSELNSARQGHGLEL-KDKFTVRYANDARHSNDVGAIQANHPVPPNCTVYYYELTVLDSGIFGKIAIGFADKSFKLTRQPGWEAGSYGYHGDDGKKFIGHGNGEDYGPTFGTGDTVGAGIHLGRQELFFTKNGTRLKVAHRPVR-----AGLYPTIGLHSKGEIVQVNFGQKPFVFDLEGMLAEEKAAQRAAVDRIPVSSGVTHKLVRQYLLH 218
BLAST of mRNA_L-elsbetiae_contig7182.16020.1 vs. uniprot
Match: A0A8J4BLG1_9CHLO (Uncharacterized protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BLG1_9CHLO) HSP 1 Score: 161 bits (407), Expect = 1.150e-42 Identity = 82/213 (38.50%), Postives = 118/213 (55.40%), Query Frame = 1 Query: 214 PSRIDTTKNSYHVVCDRDKLGVRYRGQGNHAKDWGTVRANHPLPRRRRVSYFEITIAAMGDLCNITIGLVPDSFPMDKQPGAEGASYGLEGASGEALSGGPRGPNFANSISTGDTVGLGVNFKKREAFLTHNGRLLGSAFPGIRCALDAAGLYPCVGLHGPGEAVRINFGQRPFLFDLGASVKREDVREQAAVAAVPVCPSLLRSLVRDYLLH 852 PS +++ + + + +DK VRY H D G ++ANHP+P V Y+E+T+ G I IG SF + +QPG E S+G G G+ G G ++ + TGDTVG G++ ++E F T NG L A+ +R AGLYP +GLH GE V +NFGQ+PF+FDL + E +AA+ +PV P + +VR YLLH Sbjct: 12 PSELNSARQGHGLEL-KDKFTVRYASDARHTNDVGAIQANHPVPPNCTVYYYELTVLDSGIYGKIAIGFADKSFKLTRQPGWEAGSFGYHGDDGKKFIGLGNGEDYGPTFGTGDTVGAGIHLGRQELFFTKNGTKLKVAYRPVR-----AGLYPTIGLHSKGETVLVNFGQKPFVFDLEGMLAEEKAAHRAAIDRIPVSPGITHEIVRQYLLH 218
BLAST of mRNA_L-elsbetiae_contig7182.16020.1 vs. uniprot
Match: A0A836BBQ5_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BBQ5_9CHLO) HSP 1 Score: 161 bits (408), Expect = 1.430e-42 Identity = 86/216 (39.81%), Postives = 121/216 (56.02%), Query Frame = 1 Query: 205 EYLPSRIDTTKNSYHVVCDRDKLGVRYRGQGNHAKDWGTVRANHPLPRRRRVSYFEITIAAMGDLCNITIGLVPDSFPMDKQPGAEGASYGLEGASGEALSGGPRGPNFANSISTGDTVGLGVNFKKREAFLTHNGRLLGSAFPGIRCALDAAGLYPCVGLHGPGEAVRINFGQRPFLFDLGASVKREDVREQAAVAAVPVCPSLLRSLVRDYLLH 852 E LPS ++T + + + +DKL VRY G H D G ++ANHP+P V Y+E+TI G I IG +F + +QPG E SYG G G+ G G ++ + GDTVG G++ ++E F T NG L +A +R GLYP +GLH GE V++NFG +PF+FD+ + E ++AAV +PV P +LVR YLLH Sbjct: 5 EPLPSALNTARQGHGLEL-KDKLTVRYAGDARHNNDVGAIQANHPVPVNCTVYYYELTILDGGISGKIAIGFADKNFKVTRQPGWEVGSYGYHGDDGKKFIGSGMGEDYGPTFGAGDTVGAGIHLGRQELFFTKNGTKLKAAHRPVR-----GGLYPTIGLHSKGEMVQLNFGAKPFVFDIEGMLAEERAAQRAAVERIPVAPGTSHALVRQYLLH 214
BLAST of mRNA_L-elsbetiae_contig7182.16020.1 vs. uniprot
Match: A0A2V0P549_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P549_9CHLO) HSP 1 Score: 160 bits (406), Expect = 2.390e-42 Identity = 87/213 (40.85%), Postives = 116/213 (54.46%), Query Frame = 1 Query: 214 PSRIDTTKNSYHVVCDRDKLGVRYRGQGNHAKDWGTVRANHPLPRRRRVSYFEITIAAMGDLCNITIGLVPDSFPMDKQPGAEGASYGLEGASGEALSGGPRGPNFANSISTGDTVGLGVNFKKREAFLTHNGRLLGSAFPGIRCALDAAGLYPCVGLHGPGEAVRINFGQRPFLFDLGASVKREDVREQAAVAAVPVCPSLLRSLVRDYLLH 852 P+ + T + H+ +DKL VRY G G H D G ++AN P+P ++ + YFE+TI G+L I +G P + +QPG E SYG G G S +G + GDTVG ++ K+E F T NG L +AF +R ++ GL P VGLH EAV +NFG RPF FDL + E E AV +VP+ PS VR YLLH Sbjct: 6 PTELSPTAHGPHLELGKDKLTVRYTGDGRH--DVGAIQANRPVPAKQLLFYFEVTILDQGELGKIGVGFTPKDVKLTRQPGWEPGSYGYHGDDGLRYSSSGKGEEYGPRFGAGDTVGAALHLGKQEIFFTKNGNKLRTAFSSVR---NSPGLVPTVGLHSRNEAVAVNFGARPFRFDLEGLLAEEAAAEAEAVDSVPLPPSAAHEAVRSYLLH 213
BLAST of mRNA_L-elsbetiae_contig7182.16020.1 vs. uniprot
Match: I0YML3_COCSC (SPRY-domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YML3_COCSC) HSP 1 Score: 160 bits (404), Expect = 4.810e-42 Identity = 86/225 (38.22%), Postives = 123/225 (54.67%), Query Frame = 1 Query: 196 ENGEYLPSRIDTTKNSYHVVCDRDKLGVRYRGQGNHAKDWGTVRANHPLPRRRRVSYFEITIAAMGDLCNITIGLVPDSFPMDKQPGAEGASYGLEGASGEALSGGPRGPNFANSISTGDTVGLGVNFKKREAFLTHNGRLLGSAFPGIRCALDAAGLYPCVGLHGPGEAVRINFGQRPFLFDLGASVKREDVREQAA------VAAVPVCPSLLRSLVRDYLLH 852 E E L S +T + ++DKL VRY GQG H D G ++ N P+PR+RRV Y+E+T+ G+ I +G +F M KQPG E SYG G G+ +G + + GD +G G++ +++E F T NG+ LG AF G L LYP GLH PGE + +NFG PF F+L A ++ E +E+AA ++ + + LVR+YLLH Sbjct: 20 EEEEPLASHFNTNNFGNFLDVEKDKLTVRYTGQGAHNNDVGAIQGNRPVPRKRRVYYYEVTVLDAGEKGLIGVGFADKNFKMGKQPGWEPHSYGYHGDDGKKFHQNGQGEEYGPQFTLGDVIGAGIHIQRQEIFFTKNGKHLGVAFRG----LPQLPLYPTAGLHSPGECIAVNFGASPFAFNLEAMLQEEREQEEAASWVLHCACSISIPAGVTHRLVREYLLH 240 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7182.16020.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7182.16020.1 >prot_L-elsbetiae_contig7182.16020.1 ID=prot_L-elsbetiae_contig7182.16020.1|Name=mRNA_L-elsbetiae_contig7182.16020.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=284bp MGPPPRHQQHQQADESSSMDEMDTSPGGGGGGRGGGGFEAKGWGPGEEEEback to top mRNA from alignment at L-elsbetiae_contig7182:113..3748- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7182.16020.1 ID=mRNA_L-elsbetiae_contig7182.16020.1|Name=mRNA_L-elsbetiae_contig7182.16020.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3636bp|location=Sequence derived from alignment at L-elsbetiae_contig7182:113..3748- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7182:113..3748- >mRNA_L-elsbetiae_contig7182.16020.1 ID=mRNA_L-elsbetiae_contig7182.16020.1|Name=mRNA_L-elsbetiae_contig7182.16020.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1704bp|location=Sequence derived from alignment at L-elsbetiae_contig7182:113..3748- (Laminarionema elsbetiae ELsaHSoW15)back to top |