mRNA_L-elsbetiae_contig7151.15973.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7151.15973.1 vs. uniprot
Match: A0A6H5L7R8_9PHAE (ERCC4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7R8_9PHAE) HSP 1 Score: 602 bits (1553), Expect = 4.560e-208 Identity = 359/601 (59.73%), Postives = 397/601 (66.06%), Query Frame = 2 Query: 8 MAGRGRGGGRFGGDRGWT------ARRGGXXXXXXXXXXGMV--CACEANAPLLLELRNFDEECLRTGKVKLRHGLKRAMRSLEKYPLPVTTEKEACALEGVGSFTARRMLRGLSMAVPAAGGNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSALRMNLRPRHSRSHGRGAAAKTTGRPLSLASNFAALRGDVGDSGSGALTPDVTPKRPTSRARREDVGEGAGLSGASSKAPRFFSGDWEAWLIVDNREHDFMSMQSTLLQKGVRCETRQLPLGDMLWIARRKNDPTSEVLLGYIVERKTASDLASSIVDGRYDEQKRRLRLSGLRRRIYLVEGNLSHQSQLAPSALRTALASSQAKGGLAVVQCDSLRDSVEFLARTHRHVASLLLQACRSSCPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRPAMTYGEYAQGCAKRAGATTVRKVLGAMMRQVPGCSAARAEAVVREFDSPLGLMLALERAAEGGGSGDAGCERCHDDAARMKRVDDLLAGLVCRGGAGTNKLPQPLRRLLCRLFVGESVD 1786 MAGRGRGG RFGG G + + RGG CAC +N PLL+EL++ DEECLRTGKVKLRHGL RAM+SL++YPLP+TTEKEACALEGVGSFTARRMLRGL A P ++ S LRMNLR G A T GRPLSLASNFAALRG G TPDVTPKRPTSRAR+E E +G + SSKAP FFSG WEAWL+VDNREH+FMS+QS+LLQKG+RCETRQLPLGDMLWIAR+++DPTSEVLLGYIVERKTASDLASSI+DGRY+EQKRRL+LSGLRRRIYLVEGNL+HQ QLAP+ALRTAL SSQA GGLAVVQCD LRD+V FLARTHRH+ASLL +CR S +LRPAMTYGEYAQGCAKRAG+TTVR+VLGAM+RQ PGCSAARAEA+VR FDSPLGLMLALERAA G G AG DDAARMKR D LL GLVC GGAGTNKLPQPLRRLLCRLF+G+SVD Sbjct: 1 MAGRGRGG-RFGGQDGNSHGKIVASGRGGSDASALARVLNTADCCACVSNGPLLVELKSLDEECLRTGKVKLRHGLMRAMKSLKRYPLPITTEKEACALEGVGSFTARRMLRGLPPAGPEPENSSGVRRTDEENIEPSGSSSSRGGGARKSSNKSTGTSSVTNADAGSRLPSD---------------------------TNSLLRMNLRV------GSSATTTTGGRPLSLASNFAALRG-----GGEETTPDVTPKRPTSRARKE---EASGETARSSKAPSFFSGQWEAWLVVDNREHEFMSVQSSLLQKGIRCETRQLPLGDMLWIARKRDDPTSEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVEGNLNHQEQLAPAALRTALVSSQACGGLAVVQCDGLRDTVNFLARTHRHIASLLELSCRREAGLSPVRGSRECSGGRA-----------------MLRPAMTYGEYAQGCAKRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLALERAASG--DGIAG-----DDAARMKRADALLGGLVCSGGAGTNKLPQPLRRLLCRLFLGDSVD 535
BLAST of mRNA_L-elsbetiae_contig7151.15973.1 vs. uniprot
Match: A0A836CKB8_9STRA (Restriction endonuclease type II-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKB8_9STRA) HSP 1 Score: 199 bits (506), Expect = 1.300e-55 Identity = 130/318 (40.88%), Postives = 171/318 (53.77%), Query Frame = 2 Query: 836 FFSGDWEAWLIVDNREHDFMSMQSTLLQKGVRCETRQLPLGDMLWIARR--KNDPT--SEVLLGYIVERKTASDLASSIVDGRYDEQKRRLRLSGLRRRIYLVEGNLSHQSQLAPSALRTALASSQAKGGLAVVQCDSLRDSVEFLARTHRHVASLLLQACRSSCPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRPAMTYGEYAQGCAKRAGATTVRKVLGAMMRQVPGCSAARAEAVVREFDSPLGLMLALERAAEGGGSGDAGCERCHDDAARMKRVDDLLAGLVCRGGA--GTNKLPQPLRRLLCRLFV 1771 F G W LI D RE + Q+ +L + CE R LPLGDMLW+AR + P+ EVLLGYIVERKTASDL SS+VDGR+ EQK R+ GL R IYLVEG ++H ++L P+ LRTA+A +QA+ G+ V+ ++ +SV L R HRH+A+ L ACR S+ +RP M+ +Y C K VR V G +RQV GCSAARA A++ E+ +PL MLA+E A E ERC + LLAG+ GA KL +PL+ LC+L+ Sbjct: 8 FAGGIWTPVLIFDTREEHAQASQAAVLNANMLCEVRSLPLGDMLWVARNMDRQSPSYLQEVLLGYIVERKTASDLGSSMVDGRFHEQKHRMARHGLGRVIYLVEGPITHTTRLTPAHLRTAMAHTQAQDGMTVLWTANVTESVAHLQRVHRHIAASLEAACRGITASAPGTG---------------------------VRPIMSMDQYRAQCGKGKDGD-VRYVFGCQLRQVYGCSAARAAAILNEYPTPLDFMLAMEAAGES--------ERCLE----------LLAGIKGEPGARMAEAKLTKPLQAALCKLYA 279
BLAST of mRNA_L-elsbetiae_contig7151.15973.1 vs. uniprot
Match: A0A7S3XK47_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK47_HETAK) HSP 1 Score: 131 bits (329), Expect = 1.590e-30 Identity = 97/279 (34.77%), Postives = 134/279 (48.03%), Query Frame = 2 Query: 899 MQSTLLQKGVRCETRQLPLGDMLWIAR---------------------RKNDPTSEVL-----------LGYIVERKTASDLASSIVDGRYDEQKRRLRLSGLRRRIYLVEGNLSHQSQLAPSALRTALASSQAKGGLAVVQCDSLRDSVEFLARTHRHVASLL---LQACRSSCPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRPAMTYGEYAQGCAKRAGATTVRKVLGAMMRQVPGCSAARAEAVVREFDSPLGLMLALERAAEGGGSGD 1630 +Q+ LL GV CE QL +GDM+W AR +K+ T+ +L LG++VERKTA DLA SI+DGRY EQK RL+ SGL + YLVEG+LS Q L +LRTA+AS+ + G +V +C +L +SV +LARTH VA L + A +S P + P MTY Y C K A V+ + G ++Q PG S + +A++ F +P LM +R + G D Sbjct: 2 VQAKLLAVGVACEVGQLAVGDMVWAARWRRPGWHADIPLTQTLNQPQKKKSKSTATILENLHKNEELFVLGFVVERKTAEDLAKSIIDGRYAEQKVRLKKSGLSKVTYLVEGSLSGQDVLPTKSLRTAMASTLIQHGFSVQRCANLDESVRWLARTHHQVARQLGYAVAAAQSGDPLDSFKA---------------------------VLPVMTYRHYHDQCGKLK-AQKVQDIFGMQLKQFPGMSVGKIQAILERFPTPQRLMDGYKRYVDEGHDAD 252
BLAST of mRNA_L-elsbetiae_contig7151.15973.1 vs. uniprot
Match: A0A7R9UCP7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCP7_9STRA) HSP 1 Score: 124 bits (312), Expect = 3.430e-26 Identity = 72/158 (45.57%), Postives = 98/158 (62.03%), Query Frame = 2 Query: 821 SKAPRFFSGDWEAWLIVDNREHDFMSMQSTLLQKGVRCETRQLPLGDMLWIARRKNDPTSEVLLGYIVERKTASDLASSIVDGRYDEQKRRLRLSGLRRRIYLVEGNLSHQSQLAPSALRTALASSQAKGGLAVVQCDSLRDSVEFLARTHRHVASLL 1294 S+ P D L+ D+RE ++QS LLQ+GV CE R L LGDM+WIA+ + E +L +I+ERK+A+DLA SI+DGRY EQK RLR SG+ YLVEG S Q +L ALRTA+A ++ G V+ +++ S E L R H + SL+ Sbjct: 424 SRCPPVPFEDLSVILVQDHRETRKDAVQSHLLQRGVSCENRALHLGDMIWIAQDRRSDV-EYVLDFIIERKSAADLAESIIDGRYAEQKSRLRASGIGHVTYLVEGAASSQERLPKQALRTAMAETRVLPGFRVLHTNNIAQSAEELRRMHEQIKSLM 580
BLAST of mRNA_L-elsbetiae_contig7151.15973.1 vs. uniprot
Match: A0A4D9DDT9_9STRA (ERCC4 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DDT9_9STRA) HSP 1 Score: 116 bits (290), Expect = 1.790e-23 Identity = 95/299 (31.77%), Postives = 135/299 (45.15%), Query Frame = 2 Query: 848 DWEAWLIVDNREHDFM-SMQSTLLQKGVRCETRQLPLGDMLWIARRKND------------------------------PTSE---VLLGYIVERKTASDLASSIVDGRYDEQKRRLRLSG--LRRRIYLVEGNLSH-QSQLAPSALRTALASSQAKGGLAVVQCDSLRDSVEFLARTHRHV----ASLLLQACRSSCPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRPA---MTYGEYAQGCAKRAGATTVRKVLGAMMRQVPGCSAARAEAVVREFDSPLGLMLALERAAE 1612 +WE ++D EH+ S+++TLLQ G+RCE R L L D+LW+ARR+ + PT E ++L Y++ERKT DLASSI DGRY EQK R+ G + R YLVEG L + P+ALRTAL S+Q G+ V+Q SL ++ L R H + A L AC + +S PA + EY C K G +VR + A + + S A+++AVV + +P L A++ E Sbjct: 350 EWEVVALLDRVEHENNPSIEATLLQAGIRCEVRVLRLADVLWVARRRAEGRLGGDGGGRAAAGIAVDPGDAGGLREGGHPTEEEEEIMLRYMIERKTVPDLASSIKDGRYREQKGRMLGVGREIDRAFYLVEGRLEQLNDMIRPAALRTALISTQVVHGMPVLQTASLDQTIALLQRMHTRISHEFAHFLQAACGHNRLNSEGDLLPATESFDGLAQSERLSEYLQKHSKAFPLPASRIIRLAEYQHLCRKTVGNLSVRAMFTAQLCAIDKVSEAKSKAVVNAYSTPSRLARAMQSITE 648
BLAST of mRNA_L-elsbetiae_contig7151.15973.1 vs. uniprot
Match: A0A8K1CQN6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQN6_PYTOL) HSP 1 Score: 114 bits (286), Expect = 5.930e-23 Identity = 88/263 (33.46%), Postives = 131/263 (49.81%), Query Frame = 2 Query: 848 DWEAWLIVDNRE----HDFMSMQSTLLQKGVRCETRQLPLGDMLWIARR-KNDPTS------EVLLGYIVERKTASDLASSIVDGRYDEQKRRLRLSGLRRRIYLVEGNLSHQSQLAPSALRTALASSQAKGGLAVVQCDSLRDSVEFLARTHRHVASLLLQACRSSCPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRPAMTYGEYAQGCAKRAGATTVRKVLGAMMRQVPGCSAARAEAVVREFDSPLGLMLALER 1603 +W+ L++D+RE + ++ LL+ V CE R L +GD+ WIARR + DP + E++L I+ERK +DL+ SIVD RY+EQK RL+ SG+ IYLVEG+LS Q+ + S L+TAL +Q + V C + ++V FL H + + L + R P RP T+ + K+A TV ++ M+ QVPG SA+R A+ +F + L ALER Sbjct: 403 EWQLVLLLDHREILSRRNRDILERKLLECNVTCEVRVLNVGDVQWIARRYRRDPLTDSCSVDELMLNVIIERKEVNDLSGSIVDRRYNEQKTRLKESGMTHVIYLVEGSLSQQTTVRTSGLQTALCRTQVQDQFFVQLCQNADETVAFLRGVHARLLAKLPLSMRCRNPERSTSIRPPYFASFSASTAAVTPEDWCRQ---FCRPVRTFTAFNAQFRKKAD-FTVGELYQMMLMQVPGLSASRTVALSAQFPTFHHLCEALER 661
BLAST of mRNA_L-elsbetiae_contig7151.15973.1 vs. uniprot
Match: A0A067BND5_SAPPC (ERCC4 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BND5_SAPPC) HSP 1 Score: 111 bits (277), Expect = 6.370e-23 Identity = 92/267 (34.46%), Postives = 130/267 (48.69%), Query Frame = 2 Query: 848 DWEAWLIVDNREHDFMSMQST----LLQKGVRCETRQLPLGDMLWIARRKNDPT-------SEVLLGYIVERKTASDLASSIVDGRYDEQKRRLRLSGLRRRIYLVEGNLSHQSQLAPSALRTALASSQAKGGLAVVQCDSLRDSVEFLARTHRHV--ASLLLQACRSSCPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRPAMTYGEYAQGCAKRAGATTVRKVLGAMMRQVPGCSAARAEAVVREFDSPLGLMLALERAA 1609 +WE L++D+RE S +S LL+ GV CE R L LGDM+WIARR PT E +L IVERK SDLA SI+D RY EQK+RL +GLR +YL+EG+L+ ++ L +AL TAL +Q V S ++V FL+ H H A + R++ P + ++GE+ + K+A TT ++ M+ QVPG SA RA + + L L ++AA Sbjct: 84 EWEIVLLLDHREMVSRSNKSVFERKLLEAGVTCEVRGLHLGDMMWIARRHR-PTFGGRAIEEEFVLDVIVERKAVSDLALSIIDKRYTEQKQRLADAGLRYVVYLLEGSLAVETILGATALATALTRTQVLNNYLVHHAASPDETVAFLSALHWHTVRAFSAVYKVRNAAPPTAASIGRLPACLRDFTQLIPTTW-------------QSFGEFNETFRKKAAPTT-GELYQMMLMQVPGISATRARDLGAAHPTFLSLWQETQKAA 335
BLAST of mRNA_L-elsbetiae_contig7151.15973.1 vs. uniprot
Match: A0A1V9ZBA3_9STRA (Crossover junction endonuclease MUS81-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZBA3_9STRA) HSP 1 Score: 113 bits (283), Expect = 7.210e-23 Identity = 89/263 (33.84%), Postives = 127/263 (48.29%), Query Frame = 2 Query: 848 DWEAWLIVDNRE----HDFMSMQSTLLQKGVRCETRQLPLGDMLWIARRKNDP-----TSEVLLGYIVERKTASDLASSIVDGRYDEQKRRLRLSGLRRRIYLVEGNLSHQSQLAPSALRTALASSQAKGGLAVVQCDSLRDSVEFLARTHRHVASLLLQA--CRSSCPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRPAMTYGEYAQGCA--KRAGATTVRKVLGAMMRQVPGCSAARAEAVVREFDSPLGLMLAL 1597 +WE L++D+RE + + LL+ V CE R L LGDMLWIARR E +L +VERK +DLA SI+D RY EQK+RL SGLR +YLVEG+LS ++ + + LRTAL +Q V + ++V FLA H HV ++ CR+ P + L P M++ YA A ++ A + ++ M+ Q+PG SA RA+A+ + L AL Sbjct: 264 EWEVVLLLDHREMLSRRNPAVFERKLLEAHVTCEVRALHLGDMLWIARRGRQDQGRTVVEEFVLDVVVERKAVTDLALSIIDKRYTEQKQRLAESGLRYVVYLVEGSLSTETAIGAAGLRTALTRTQVLNNYLVHHAATADETVAFLAALHWHVVGAFRESYRCRNCAPPTSAGPPPPAPLVDFTQ----------------LLP-MSWQPYADFNATFRKKAAPSAGELYQMMLMQIPGISAGRAQALGTAHPTFASLWAAL 509
BLAST of mRNA_L-elsbetiae_contig7151.15973.1 vs. uniprot
Match: UPI001ED82114 (crossover junction endonuclease MUS81 n=1 Tax=Scatophagus argus TaxID=75038 RepID=UPI001ED82114) HSP 1 Score: 112 bits (279), Expect = 3.240e-22 Identity = 103/340 (30.29%), Postives = 151/340 (44.41%), Query Frame = 2 Query: 809 SGASSKAPRFFS---GDWEAWLIVD------NREHDFMSMQSTLLQKGVRCETRQLPLGDMLWIARRKNDPTS---------EVLLGYIVERKTASDLASSIVDGRYDEQKRRLRLSGLRRRIYLVE--GNLSHQSQLAPSALRTALASSQAKGGLAVVQCDSLRDSVEFLARTHRHVASLLLQACRSSCPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRPAMTYGEYAQGCAKRAGATTVRKVLGAMMRQVPGCSAARAEAVVREFDSPLGLMLALERAAEGGGSGDAGCERCHDDAARMKRVDDLLAGLVCRGGAGTNKLPQPLRRLLCRLF 1768 S A+S+ P S G +E L VD +H + L + GV + R+L +GD LW+AR K +P E++L YIVERK DL SI+DGR+ EQK RL+ GLRR IYLVE G + L S L+ A+ ++Q G V + +R+S +L RH+ L Q C C S XXXXX +++ E+ G K TVR+V + Q+ G S +A A++ ++SP L+ A E+ C +A + K + + G + R L L R +C+L+ Sbjct: 297 SQATSRKPNLGSLLPGAYEIILCVDFIETTGGSQHRKQELVKELQRNGVNFDVRKLNVGDFLWVAREKVEPVPGQLRAPAGRELVLDYIVERKRMDDLCGSIIDGRFREQKFRLKRCGLRRPIYLVEECGTAASHLSLPESTLQQAIVNTQVVDGFFVKRVQDVRESAAYLTVMTRHLTKLY-QNCTLICRSRELEGDGGSDXXXXXGPSCSL---------------ISFAEFNHGAVKNK-CQTVREVFARQLMQISGLSGDKAAAILEHYNSPHSLLTAYEQ--------------CVSEADKEKLLSSIRYGKLKRN------LGPALSRTVCQLY 599
BLAST of mRNA_L-elsbetiae_contig7151.15973.1 vs. uniprot
Match: A0A067CHT1_SAPPC (ERCC4 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CHT1_SAPPC) HSP 1 Score: 110 bits (275), Expect = 7.960e-22 Identity = 92/267 (34.46%), Postives = 129/267 (48.31%), Query Frame = 2 Query: 848 DWEAWLIVDNREHDFMSMQST----LLQKGVRCETRQLPLGDMLWIARRKNDPT-------SEVLLGYIVERKTASDLASSIVDGRYDEQKRRLRLSGLRRRIYLVEGNLSHQSQLAPSALRTALASSQAKGGLAVVQCDSLRDSVEFLARTHRHV--ASLLLQACRSSCPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRPAMTYGEYAQGCAKRAGATTVRKVLGAMMRQVPGCSAARAEAVVREFDSPLGLMLALERAA 1609 +WE L++D+RE S +S LL+ GV CE R L LGDM+WIARR PT E +L IVERK SDLA SI+D RY EQK+RL +GLR +YL+EG+L+ ++ L +AL TAL +Q V S ++V FL+ H H A + R++ P ++GE+ + K+A TT ++ M+ QVPG SA RA + + L L ++AA Sbjct: 275 EWEIVLLLDHREMVSRSSKSVFERKLLEAGVTCEVRGLHLGDMMWIARRHR-PTFGGRPIEEEFVLDVIVERKAVSDLALSIIDKRYTEQKQRLADAGLRYVVYLLEGSLAVETILGATALATALTRTQVLNNYLVHHAASPDETVAFLSALHWHTVRAFSAVYKVRNAAPPVAASIGRPPACLRDFTQLIPTTW-------------QSFGEFNETFRKKAAPTT-GELYQMMLMQVPGISATRARDLGAAHPTFLSLWQETQKAA 526 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7151.15973.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7151.15973.1 >prot_L-elsbetiae_contig7151.15973.1 ID=prot_L-elsbetiae_contig7151.15973.1|Name=mRNA_L-elsbetiae_contig7151.15973.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=610bp MAGRGRGGGRFGGDRGWTARRGGGGSGGGGAGRGMVCACEANAPLLLELRback to top mRNA from alignment at L-elsbetiae_contig7151:2945..8795+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7151.15973.1 ID=mRNA_L-elsbetiae_contig7151.15973.1|Name=mRNA_L-elsbetiae_contig7151.15973.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5851bp|location=Sequence derived from alignment at L-elsbetiae_contig7151:2945..8795+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7151:2945..8795+ >mRNA_L-elsbetiae_contig7151.15973.1 ID=mRNA_L-elsbetiae_contig7151.15973.1|Name=mRNA_L-elsbetiae_contig7151.15973.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3660bp|location=Sequence derived from alignment at L-elsbetiae_contig7151:2945..8795+ (Laminarionema elsbetiae ELsaHSoW15)back to top |