prot_L-elsbetiae_contig712.15932.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig712.15932.1
Unique Nameprot_L-elsbetiae_contig712.15932.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1233
Homology
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BLAST of mRNA_L-elsbetiae_contig712.15932.1 vs. uniprot
Match: A0A6H5JMN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMN5_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 1.320e-20
Identity = 101/251 (40.24%), Postives = 127/251 (50.60%), Query Frame = 0 
Query:    1 MEASRSRRHSADATGRRGTLL--HHDPSVPTATEGS---------IMPHLDRSCQQQLATHAGL--SSGSXXXXXXXXXXXXXXXXXXGEEGSDFCYSPYQPMIIKPTFSSLSPRPRRASAPISPASMVLHKSL-GGDTRRNTV-----GPTLEQCLVLPPGVALKVDGLLSQQPLLSKLGAEDGGRDGGGGDGLDQVA-------------SKEGVGGSLQAGRGEGGLHAGDDRAIISTYTFEPASLQA 219
            ME SR RRHS   TG+RG +   H D ++P     S         I P  DR      A  AG   +  S    XXXXXXXX       +  +DF +SPYQPM+I+ T SS+SPRPRRASAP+ P S++  K L  G+ R+        GPTL+QCLVLP GVALK+DGLLS      + G   G  DG GG  +D+                K+G G +      E     G DRAIIS++ F  +  QA
Sbjct:    3 METSRPRRHSV-GTGQRGAISRQHVDDALPGVGASSEPRRKAGSTIRPPEDRKLSAGGAATAGRPRAEPSVPSSXXXXXXXXASGRRGRKSSADFSFSPYQPMVIETTSSSVSPRPRRASAPVPPTSLLPFKPLMAGEKRQQREPGADGGPTLDQCLVLPSGVALKIDGLLSTSGAERECGVSIGNGDGAGGADVDRXXXXXXXXXGSSNSLEKDGAGVACPLPGAERDDDDGGDRAIISSFHFNTSGSQA 252
[Close]
BLAST of mRNA_L-elsbetiae_contig712.15932.1 vs. uniprot
Match: D7FM99_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM99_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 5.850e-11
Identity = 60/149 (40.27%), Postives = 76/149 (51.01%), Query Frame = 0 
Query:   90 MIIKPTFSSLSPRPRRASAPISPASMVLHKSL-GGDTRRNTV-----GPTLEQCLVLPPGVALKVDGLLSQQPLLSKLGAEDGGRDGGGGDGLDQVA-------------SKEGVGGSLQAGRGEGGLHAGDDRAIISTYTFEPASLQA 219
            M+I+ T SS+SPRPRRAS P+ P S++  K L  G+ R+        GPTL+QCLVLP G ALK+DGLLS      + G   G  DG GG   D+                K+G G +      E     G DRAIIS++ F     QA
Sbjct:    1 MVIETTSSSVSPRPRRASEPVPPTSLLPFKPLMAGEKRQQREPGANGGPTLDQCLVLPSGGALKIDGLLSTSGAERECGVSIGNGDGAGGADADRXXXXXXXXXXXSNSLEKDGAGVACPLPGAEREDDNGGDRAIISSFHFNTPGSQA 149
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig712.15932.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JMN5_9PHAE1.320e-2040.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FM99_ECTSI5.850e-1140.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 698..710

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig712contigL-elsbetiae_contig712:14108..19825 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig712.15932.1mRNA_L-elsbetiae_contig712.15932.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig712 13859..21267 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig712.15932.1 ID=prot_L-elsbetiae_contig712.15932.1|Name=mRNA_L-elsbetiae_contig712.15932.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1233bp
MEASRSRRHSADATGRRGTLLHHDPSVPTATEGSIMPHLDRSCQQQLATH
AGLSSGSSAAARRRRSGGRRRSSKGGEEGSDFCYSPYQPMIIKPTFSSLS
PRPRRASAPISPASMVLHKSLGGDTRRNTVGPTLEQCLVLPPGVALKVDG
LLSQQPLLSKLGAEDGGRDGGGGDGLDQVASKEGVGGSLQAGRGEGGLHA
GDDRAIISTYTFEPASLQAAATREGAVEHAAPAAGELDPVGDAVTVVSSG
PREARDGTTEEGCATTPAEETLDPEGVCSSAGASDSRQGIDDREMTGASA
ATTVTMAGEDETAEGSVVAGEEADAHGSLGEEDELASDVVPDRKAFDDAV
VVDLREGTGDGSGGFGGVGIDPHSAASPLAVVDVGQPEVALVAADAAADK
SLTEGHHEEGGVLTTGASAEATATVAEDDEPAGGSMVAGEEPNAQGTLGG
EGKWASYVVADRKASDDAVIIDSQGETGGGSGGLGSVGIDPHRAASLVAV
VDSRQAEAALVIADAAEKSLTEGHHGEGGVLPHAVESETFGLNGTAADSC
ETSETVHSSPILEAGESLNDGQSGAAMGGGVSATARGSEDDYDNDEHVSE
EDMAEGTGAASVEHKDSVTAREESGEDKAGYTQEEDNNSRGSEDDCDNDR
HVSEDDMAEGTGAAPVERKDSVTVREESGEDKAGYTQEEDNRRGSEDDCD
NDGHVSEDDMTEGTGAASVERKDSVTAREESGADKAGHIQEGENSTCHDR
GDVALEVGNERARAPASEEEALGGVVTPVAAGASMVCNGSRIAAKAEEGE
GVVESSEDVQEHEMGQVREIVGEGSASGVITGEATASLSSCPATNDQEKK
EKQNPVAAETAVPLSSFALGAVAEPAQPPAQPPVEHHESGLADADDGALS
PAIEAYPSHVTDSDVSDVAKDPSGRTSPEVAVQKEGGVPLDWEALAREVE
AEWVMEGSDGESGGSLSTASSLGSPTPSLPPPPTTAGVPSPYDVAVAVLE
ASSADSLGEQEDVEVCSRTSRDEGEQSEFASGVLEAPPAAATQPSRQWEG
DSGGGRGGGISCILEDSKEQGEGDSDCGSPVPAASEGEDQIPADKAQVPT
HATTCNTWRQQQSSASTPSAGVQLPDERTYAIDPMEDDAARSVVSEEGPL
PAPIRPPGVAEQVDGGRGNHQVPPAAPVPASTAESVPPVSGSHDGGVGVP
LRPGQESARREVGGVGRVRAGGVRTGSCCVVM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS