prot_L-elsbetiae_contig1183.1577.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1183.1577.1
Unique Nameprot_L-elsbetiae_contig1183.1577.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length588
Homology
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BLAST of mRNA_L-elsbetiae_contig1183.1577.1 vs. uniprot
Match: A0A6H5K5N3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5N3_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 5.100e-5
Identity = 22/35 (62.86%), Postives = 26/35 (74.29%), Query Frame = 0 
Query:    4 EFCIQHAHEGMVNVVSKRCRHPTCTKRAAFGLEGS 38
            EFC QH  + MVNVVSKRC HP CTK+ ++G  GS
Sbjct:   23 EFCSQHKQQDMVNVVSKRCGHPGCTKQPSYGRAGS 57
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1183.1577.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K5N3_9PHAE5.100e-562.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1183contigL-elsbetiae_contig1183:6914..8677 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1183.1577.1mRNA_L-elsbetiae_contig1183.1577.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1183 6437..8687 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1183.1577.1 ID=prot_L-elsbetiae_contig1183.1577.1|Name=mRNA_L-elsbetiae_contig1183.1577.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=588bp
MQVEFCIQHAHEGMVNVVSKRCRHPTCTKRAAFGLEGSTKREFCKQHAPE
GMMNVGYRRCGHPGCTIMPSLGVKGTTNAAFCAQHAQEGMVNVLGKRRCG
HPTCTKLPSYGLEGTNKREFCAQHAQKGMVNVTSGRCGHPTCFKHAAFGL
EGSKKREFCAQHAQEGMVDVVSKRCGHPTCTRHPSYCTGGTKKVEFCAQH
AHEGMVRVGSKKRCGHQECSKTPTWGVDGTTNAEYCKSHAKEEMVDVRTK
RCGHPNCKTKPTHGLEGTKKAVFCAKHAHDGMVDIIHKRCRYPGCTTRAN
HGVEGSKKTEFCRSHALDGMVNVVNKRCVAPACIKQPSFGVEGTKKIEFC
SQHAKDGMINLSSSRCAHQSCKKSASHSVPGSRTREFCAQHAGQGMINVI
TRRCAHPSCTKIPSYGIDGTKRAEYCARHAHDGLVNVISKRCAHRGCRKH
PCYGFESRRIKECCAQHAEDGMSFCRTWNRPSSSRENRAHCGVGGKSGTR
PAIAMGEAEASLVAEGRSSRASSKRARLAVDHDSTRVVDPDAVRSEAMEG
IVVDRVEGLLSGPGEGGVRQQAPQGSSASEAVVKGSS*
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