mRNA_L-elsbetiae_contig11824.1576.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11824.1576.1 vs. uniprot
Match: A0A6H5JMR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMR6_9PHAE) HSP 1 Score: 216 bits (551), Expect = 6.270e-65 Identity = 105/124 (84.68%), Postives = 115/124 (92.74%), Query Frame = 1
Query: 34 RVFDDEEWFRSIFSASTKREAVQNQAEFLVERLGGPKLYTQRKGKHHRLIHRHSPYDLNPRSAARWLEHMEATLDSGEGVDLPAKELLMAYFSHMAYFLVAGKEMSNPSALVDYANKMAESRPK 405
RVFDDEEWFRSIFSASTKREAVQNQA+FLVERLGGPKLYT+RKGKH+RLIHRHSPYDLNP+SAARWLEHMEA +D+ GVD +K LLMA+FSHMA+FLVAGK+MSNPS LVDY NKMAES PK
Sbjct: 48 RVFDDEEWFRSIFSASTKREAVQNQADFLVERLGGPKLYTKRKGKHYRLIHRHSPYDLNPKSAARWLEHMEAAIDASGGVDAESKRLLMAFFSHMAFFLVAGKDMSNPSNLVDYHNKMAESCPK 171
BLAST of mRNA_L-elsbetiae_contig11824.1576.1 vs. uniprot
Match: A0A0U9HKG8_KLENI (Hemoglobin-like protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HKG8_KLENI) HSP 1 Score: 129 bits (324), Expect = 9.710e-32 Identity = 66/129 (51.16%), Postives = 86/129 (66.67%), Query Frame = 1
Query: 1 LFVCYTKTCLQRVFDDEE-WFRSIFSASTKREAVQNQAEFLVERLGGPKLYTQRKGKHHRLIHRHSPYDLNPRSAARWLEHMEATLDSGEGVDLPAKELLMAYFSHMAYFLVAGKEMSNPSALVDYANK 384
+F+ + RV+DD+E WFR IF+ ST+ A QNQ EF ++RLGGP LY+QRKG H LI RH PY + R+A RWLEHM+ LD G+D +++ L +F H AYFLVAGKE+ N + LV Y K
Sbjct: 35 VFIDLSTNFYTRVYDDKETWFRDIFANSTREHATQNQYEFFIQRLGGPPLYSQRKG-HPALIGRHGPYAVTERAAQRWLEHMDEALDETAGIDEDSRQRLRNFFRHTAYFLVAGKELVNRNRLVGYGGK 162
BLAST of mRNA_L-elsbetiae_contig11824.1576.1 vs. uniprot
Match: D8T7E2_SELML (Uncharacterized protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T7E2_SELML) HSP 1 Score: 124 bits (311), Expect = 4.990e-30 Identity = 63/116 (54.31%), Postives = 83/116 (71.55%), Query Frame = 1
Query: 4 FVCYTKTCLQRVF-DDEEWFRSIFSASTKREAVQNQAEFLVERLGGPKLYTQRKGKHHRLIHRHSPYDLNPRSAARWLEHMEATLDSGEGVDLPAKELLMAYFSHMAYFLVAGKEM 348
FV + RV+ DDEEWFRSIF+ S+K A+QNQ EF ++R+GGP LY++RKG H LI RH PY + R+A RW+EHM A LDS E +D +K+ ++ +F H A+FLVAGKEM
Sbjct: 36 FVKLSTNFYNRVYADDEEWFRSIFANSSKDAAIQNQYEFFIQRMGGPPLYSRRKG-HPALIGRHGPYPVTERAAERWIEHMTAALDSVEEIDADSKKRMLKFFRHTAFFLVAGKEM 150
BLAST of mRNA_L-elsbetiae_contig11824.1576.1 vs. uniprot
Match: A0A2P2JC83_RHIMU (Uncharacterized protein MANES_03G064300 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2JC83_RHIMU) HSP 1 Score: 124 bits (310), Expect = 8.980e-30 Identity = 64/118 (54.24%), Postives = 82/118 (69.49%), Query Frame = 1
Query: 4 FVCYTKTCLQRVFDDEE-WFRSIFSASTKREAVQNQAEFLVERLGGPKLYTQRKGKHHRLIHRHSPYDLNPRSAARWLEHMEATLDSGEGVDLPAKELLMAYFSHMAYFLVAGKEMSN 354
FV + RVFDDEE WFRSIF+ S K EA+QNQ EF V+R+GGP LY+QRKG H LI RH P+ + R+A RWL+HM+ LD+ G+D +K +M +F H A+FLVAG E+ N
Sbjct: 36 FVNLSTNFYNRVFDDEEEWFRSIFAGSKKEEAIQNQYEFFVQRMGGPPLYSQRKG-HPALIGRHRPFPVTHRAAERWLQHMQIALDTTPGIDDDSKIKMMNFFRHTAFFLVAGDELKN 152
BLAST of mRNA_L-elsbetiae_contig11824.1576.1 vs. uniprot
Match: UPI001FB16E89 (two-on-two hemoglobin-3 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB16E89) HSP 1 Score: 123 bits (308), Expect = 2.050e-29 Identity = 63/123 (51.22%), Postives = 85/123 (69.11%), Query Frame = 1
Query: 34 RVFDDE-EWFRSIFSASTKREAVQNQAEFLVERLGGPKLYTQRKGKHHRLIHRHSPYDLNPRSAARWLEHMEATLDSGEGVDLPAKELLMAYFSHMAYFLVAGKEMSNPSALVDYANKMAESR 399
RV+DDE EWFRSIF+ S+K +A+QNQ EF ++R+GGP LY++RKG H LI RH P+ + +A RWL+HM+ LDS +D +K +M +F H A+FLVAG EM NP+ V K A S+
Sbjct: 46 RVYDDEQEWFRSIFANSSKEDAIQNQYEFFIQRMGGPPLYSERKG-HPALIGRHRPFPVTHEAAERWLQHMQQALDSTADIDSDSKTKMMNFFRHTAFFLVAGNEMKNPNQGVPPPCKHATSK 167
BLAST of mRNA_L-elsbetiae_contig11824.1576.1 vs. uniprot
Match: A9S385_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9S385_PHYPA) HSP 1 Score: 122 bits (305), Expect = 3.550e-29 Identity = 60/118 (50.85%), Postives = 82/118 (69.49%), Query Frame = 1
Query: 4 FVCYTKTCLQRVFDDE-EWFRSIFSASTKREAVQNQAEFLVERLGGPKLYTQRKGKHHRLIHRHSPYDLNPRSAARWLEHMEATLDSGEGVDLPAKELLMAYFSHMAYFLVAGKEMSN 354
F+ + RV+DD+ EWFR IFS+STK +A++NQ EF V+R+GGP LY+QRKG H LI RH P+ + + A RWLEHM+A L+ +D +K+ + +F H AYFLVAGKE+ N
Sbjct: 35 FIKLSTNFYARVYDDDQEWFRKIFSSSTKEDAIRNQYEFFVQRMGGPPLYSQRKG-HPALIGRHGPFTFDEQGAVRWLEHMQAALNDTPEIDADSKKRMFDFFKHTAYFLVAGKELMN 151
BLAST of mRNA_L-elsbetiae_contig11824.1576.1 vs. uniprot
Match: C4PB37_CARPA (Truncated hemoglobin n=1 Tax=Carica papaya TaxID=3649 RepID=C4PB37_CARPA) HSP 1 Score: 121 bits (303), Expect = 9.870e-29 Identity = 66/134 (49.25%), Postives = 88/134 (65.67%), Query Frame = 1
Query: 4 FVCYTKTCLQRVFDDEE-WFRSIFSASTKREAVQNQAEFLVERLGGPKLYTQRKGKHHRLIHRHSPYDLNPRSAARWLEHMEATLDSGEGVDLPAKELLMAYFSHMAYFLVAGKEMSNPSALVDYANKMAESRP 402
F+ + RV+DDEE WFR IFS S K +A+QNQ EF V+R+GGP LY+QRKG H LI RH P+ + ++A RWL HM+ LD+ +D +K +M +F H A+FLVAG E+ NP+ V A K A S+P
Sbjct: 36 FINLSTNFYNRVYDDEEDWFRLIFSNSKKEDAIQNQYEFFVQRMGGPPLYSQRKG-HPALIARHRPFPVTHQAAERWLHHMQDALDNTPDIDSDSKIKMMNFFRHTAFFLVAGDELKNPNQQV--ACKHATSKP 166
BLAST of mRNA_L-elsbetiae_contig11824.1576.1 vs. uniprot
Match: A0A068VD10_COFCA (Uncharacterized protein n=5 Tax=Coffea TaxID=13442 RepID=A0A068VD10_COFCA) HSP 1 Score: 121 bits (303), Expect = 1.040e-28 Identity = 61/127 (48.03%), Postives = 84/127 (66.14%), Query Frame = 1
Query: 4 FVCYTKTCLQRVF-DDEEWFRSIFSASTKREAVQNQAEFLVERLGGPKLYTQRKGKHHRLIHRHSPYDLNPRSAARWLEHMEATLDSGEGVDLPAKELLMAYFSHMAYFLVAGKEMSNPSALVDYAN 381
F+ + +RV+ D+EEWFRSIFS S K +A+QNQ EF V+R+GGP LY+QRKG H LI RH P+ + R+A RWL HM+ LD+ +DL +K ++ +F H A+FLVAG E+ N + N
Sbjct: 36 FINLSTNFYERVYADEEEWFRSIFSKSKKEDAIQNQYEFFVQRMGGPPLYSQRKG-HPALIGRHRPFPVTHRAAERWLNHMQQALDATSDIDLDSKTKMLNFFRHTAFFLVAGDELKNQNQAAPCKN 161
BLAST of mRNA_L-elsbetiae_contig11824.1576.1 vs. uniprot
Match: A0A6A5NLC8_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5NLC8_LUPAL) HSP 1 Score: 120 bits (300), Expect = 1.760e-28 Identity = 62/118 (52.54%), Postives = 79/118 (66.95%), Query Frame = 1
Query: 4 FVCYTKTCLQRVFDDEE-WFRSIFSASTKREAVQNQAEFLVERLGGPKLYTQRKGKHHRLIHRHSPYDLNPRSAARWLEHMEATLDSGEGVDLPAKELLMAYFSHMAYFLVAGKEMSN 354
F+ + RV+DDEE WFRSIFS+S K A+QNQ EF V+R+GGP LY QR+G H LI RH P+ + R+A RWL HM+ LDS +D +K +M +F H AYFLVAG E+ N
Sbjct: 36 FINLSTNFYNRVYDDEEEWFRSIFSSSKKENAIQNQYEFFVQRMGGPSLYNQRRG-HPALIGRHRPFPVTHRAAERWLHHMQQALDSTPDIDDDSKIRMMNFFRHTAYFLVAGDELKN 152
BLAST of mRNA_L-elsbetiae_contig11824.1576.1 vs. uniprot
Match: A9TSV7_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TSV7_PHYPA) HSP 1 Score: 120 bits (301), Expect = 1.950e-28 Identity = 58/109 (53.21%), Postives = 76/109 (69.72%), Query Frame = 1
Query: 43 DDEEWFRSIFSASTKREAVQNQAEFLVERLGGPKLYTQRKGKHHRLIHRHSPYDLNPRSAARWLEHMEATLDSGEGVDLPAKELLMAYFSHMAYFLVAGKEMSNPSALV 369
DD++WFRSIF+ STK +A+QNQ EF ++R+GGP LY RKG LI RH PY + R+AARWL HM+ LD +DL +K + +F H A+FLVAGKE++N LV
Sbjct: 50 DDQQWFRSIFANSTKDDAIQNQYEFFIQRMGGPPLYAHRKGST-ALIARHGPYPITERAAARWLFHMKTALDKSPEIDLDSKTRMFNFFKHTAFFLVAGKELTNHHRLV 157 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11824.1576.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11824.1576.1 >prot_L-elsbetiae_contig11824.1576.1 ID=prot_L-elsbetiae_contig11824.1576.1|Name=mRNA_L-elsbetiae_contig11824.1576.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=137bp LFVCYTKTCLQRVFDDEEWFRSIFSASTKREAVQNQAEFLVERLGGPKLYback to top mRNA from alignment at L-elsbetiae_contig11824:3073..5223- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11824.1576.1 ID=mRNA_L-elsbetiae_contig11824.1576.1|Name=mRNA_L-elsbetiae_contig11824.1576.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2151bp|location=Sequence derived from alignment at L-elsbetiae_contig11824:3073..5223- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11824:3073..5223- >mRNA_L-elsbetiae_contig11824.1576.1 ID=mRNA_L-elsbetiae_contig11824.1576.1|Name=mRNA_L-elsbetiae_contig11824.1576.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=822bp|location=Sequence derived from alignment at L-elsbetiae_contig11824:3073..5223- (Laminarionema elsbetiae ELsaHSoW15)back to top |