prot_L-elsbetiae_contig6948.15718.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6948.15718.1
Unique Nameprot_L-elsbetiae_contig6948.15718.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length232
Homology
BLAST of mRNA_L-elsbetiae_contig6948.15718.1 vs. uniprot
Match: A0A6H5JRT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT8_9PHAE)

HSP 1 Score: 219 bits (559), Expect = 1.170e-63
Identity = 123/230 (53.48%), Postives = 159/230 (69.13%), Query Frame = 0
Query:    3 LRLASPISWRKQYLLRKFPGLSRLWSLEDASFAVTGTGKKAQQLRKRGRAAALWAFALENVLQANYDKRLKNGSRGQRRMFRQLIALDSIQALLQAGHAFVTAILLRLQLLTRLRILTKTMVFISTIDSSENSLRWLKRDITDTAMGLRLSRKVKLPMITIDTVILDEAACVLEPAIPVLLSLGTKNLTLVGDHNQLRPFSQVREGKASMNHARSLMERAINSGVTPQFL 232
            L  A  +SWR+ +L   FPG++RL +LE  S   TGTG+K  +LR+ GR A  WAFAL  VL+AN+ KRL+NGSR QR M RQL ALD    LL  G + V ++L+RL+ LTR RI T+T V I T+DS+E  +R ++    + A+ +          +T+DT I+DEAACVLE A+PVLL+LG KNLTLVGDH QL+PFSQVRE +A  +H+RSLMERAI+SG   QFL
Sbjct:  373 LEKAKAVSWRRLHL-PSFPGIARLLALEQESLRSTGTGEKHDKLRRSGRTAGKWAFALTCVLKANFYKRLENGSRAQRLMLRQLNALDKWVRLLSQGASRVASLLMRLEGLTRFRIFTETRVLICTVDSTERMVRTMEEGTREAAIAIGHELDASSCRLTLDTAIMDEAACVLEAAVPVLLALGIKNLTLVGDHRQLQPFSQVRENEAGKHHSRSLMERAIDSGRANQFL 601          
BLAST of mRNA_L-elsbetiae_contig6948.15718.1 vs. uniprot
Match: D7FY65_ECTSI (AAA_12 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY65_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 2.310e-27
Identity = 77/161 (47.83%), Postives = 100/161 (62.11%), Query Frame = 0
Query:    3 LRLASPISWRKQYLLRKFPGLSRLWSLEDASFAVTGTGKKAQQLRKRGRAAALWAFALENVLQANYDKRLKNGSRGQRRMFRQLIALDSIQALLQAGHAFVTAILLRLQLLTRLRILTKTMVFISTIDSSENSLRWLKRDITD----TAMGLRLSRKVKLP 159
            L+ A  +SW + +L   FPG++RL++LE  S   TGTGKK  QLR+ GRAA  WAFAL+ VL+AN+ KRL NGS  QR M  QL ALD    LL  G + V ++L+RL+ LTR RI T+T V I T+DS+E  +  +     D    TA  LRL+R    P
Sbjct:  388 LKSAQAVSWSRLHL-PNFPGVARLFALEQESLKSTGTGKKHHQLRRSGRAAGKWAFALKRVLKANFYKRLVNGSLAQRLMLHQLKALDKWVRLLSEGASRVASLLMRLEGLTRFRIFTETRVLICTVDSTERMV--VSSTFYDGKLKTAEELRLTRMSHQP 545          
BLAST of mRNA_L-elsbetiae_contig6948.15718.1 vs. uniprot
Match: E1ZLN5_CHLVA (Expressed protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZLN5_CHLVA)

HSP 1 Score: 60.5 bits (145), Expect = 5.550e-7
Identity = 42/115 (36.52%), Postives = 55/115 (47.83%), Query Frame = 0
Query:  118 ILTKTMVFISTIDSSENSLRWLKRDITDTAMGLRLSRKVKLPMITIDTVILDEAACVLEPAIPVLLSLGTKNLTLVGDHNQLRPFSQVREGKASMNHARSLMERAINSGVTPQFL 232
            IL  T V+  TIDS+   +  L     D               + +DT+++DEA CV E A+P L+ L   NL LVGDH QL  +S +       NH RS MERA+   V    L
Sbjct:  455 ILASTRVYACTIDSTPRMVFELADHGVD---------------VDVDTILMDEAGCVAEMAVPPLIKLAPANLVLVGDHLQLPAYSDL--VSPPPNHVRSFMERAVALAVPAAML 552          
BLAST of mRNA_L-elsbetiae_contig6948.15718.1 vs. uniprot
Match: A0A2P6VHN8_9CHLO (Putative ATP-dependent helicase-like n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VHN8_9CHLO)

HSP 1 Score: 56.2 bits (134), Expect = 8.460e-6
Identity = 30/70 (42.86%), Postives = 42/70 (60.00%), Query Frame = 0
Query:  163 IDTVILDEAACVLEPAIPVLLSLGTKNLTLVGDHNQLRPFSQVREGKASMNHARSLMERAINSGVTPQFL 232
            +D+V++DEA CV E A+P L+ L   NL L+GD  QL  ++ +       NH RS MERA++ GV    L
Sbjct:   14 LDSVLIDEAGCVSEMALPTLICLAPSNLVLIGDPLQLPAYTDL--VSPPHNHCRSFMERAVSFGVPAALL 81          
BLAST of mRNA_L-elsbetiae_contig6948.15718.1 vs. uniprot
Match: A0A7S3B264_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B264_9EUKA)

HSP 1 Score: 50.4 bits (119), Expect = 8.490e-5
Identity = 34/83 (40.96%), Postives = 48/83 (57.83%), Query Frame = 0
Query:  139 LKRDITDTAMGLRLSRKVKLPMITIDTVILDEAACVLEPAIPVLLSLGTKNLTLVGDHNQLRPFSQVREGKASMNHARSLMER 221
            L+RD+ +   G     K ++  +T D VILDEAA +LEP     L  G K + LVGDH QL PFS+ R+ + +  +  S+M R
Sbjct:    2 LQRDMEEGGRG----GKQQVEPLTFDFVILDEAAAMLEPDAIGCLLHGAKAVLLVGDHQQLPPFSKWRDAE-TQRYTVSMMAR 79          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6948.15718.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JRT8_9PHAE1.170e-6353.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FY65_ECTSI2.310e-2747.83AAA_12 domain-containing protein n=1 Tax=Ectocarpu... [more]
E1ZLN5_CHLVA5.550e-736.52Expressed protein n=1 Tax=Chlorella variabilis Tax... [more]
A0A2P6VHN8_9CHLO8.460e-642.86Putative ATP-dependent helicase-like n=1 Tax=Micra... [more]
A0A7S3B264_9EUKA8.490e-540.96Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041677DNA2/NAM7 helicase, AAA domainPFAMPF13086AAA_11coord: 160..202
e-value: 5.5E-9
score: 36.2
NoneNo IPR availableGENE3D3.40.50.300coord: 36..232
e-value: 5.4E-16
score: 60.7
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 86..108
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 109..232
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..85
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 137..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6948contigL-elsbetiae_contig6948:5603..6298 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6948.15718.1mRNA_L-elsbetiae_contig6948.15718.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6948 5603..6299 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6948.15718.1 ID=prot_L-elsbetiae_contig6948.15718.1|Name=mRNA_L-elsbetiae_contig6948.15718.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=232bp
AALRLASPISWRKQYLLRKFPGLSRLWSLEDASFAVTGTGKKAQQLRKRG
RAAALWAFALENVLQANYDKRLKNGSRGQRRMFRQLIALDSIQALLQAGH
AFVTAILLRLQLLTRLRILTKTMVFISTIDSSENSLRWLKRDITDTAMGL
RLSRKVKLPMITIDTVILDEAACVLEPAIPVLLSLGTKNLTLVGDHNQLR
PFSQVREGKASMNHARSLMERAINSGVTPQFL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041677DNA2/NAM7_AAA_11
IPR027417P-loop_NTPase