prot_L-elsbetiae_contig688.15633.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig688.15633.1
Unique Nameprot_L-elsbetiae_contig688.15633.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length430
Homology
BLAST of mRNA_L-elsbetiae_contig688.15633.1 vs. uniprot
Match: D7FSH8_ECTSI (RHD3b, RHD3/Sey1 family GTPase involved in the ER-to-Golgi traffic n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSH8_ECTSI)

HSP 1 Score: 689 bits (1778), Expect = 1.420e-245
Identity = 349/423 (82.51%), Postives = 383/423 (90.54%), Query Frame = 0
Query:    1 KPALEELLTLYEDGVVDPEQQKTFVVAVRDCEEGDEAELEKLVGERLQAIWAAAVKPEGFEGAALSDVLDVKVFTLPHHSFASDEYLLGAGLLKSSVMDGAADTPAEEVARLLQQVSSYAGPATEFVGGNALTASFVASSAAVKCMASFKSLVGRMGAGFTELNTDFGELCDGVVDTVMEEYDVAVEGVSGASGVLSRKKAELKRFCLRELGESHAAQIGLVRTASRGKFDEILSGLRVSPDVGKQMMDAIQEADKFFAKTAKGMNSRHGSWPSNSVRKDLRDEMREFASERLQLVQAQGGLVNMKKRKPVGMAFHWFLKKPFGSEARRSRLSPDDPLRWSHKPNRSSPMFVDLLAPNGLEVEFPEELTEETEIHRDVKQLQKVAGILVKRHDERFDTPPDVYIDGTMEGDPEKIKKEFYRGE 423
            +PALEELLTLYEDGVVDPEQ KTFVVAVRDCE+GDEAELEK VGERLQAIWAAAVKPEGF G+ALSDVLDVKVFTLPHHSFASDEYLLGAGLLK+SVMDGAA TPA EVARLLQQVSSYAGPATE VG NALTASF++SSAAVKCMASFKSLVGRMGAGF ELNTDFGELCDGV+DTV++EYD AV+GVSGASGVLSRKKAELKR CLRELG  HA Q+ L+RTA+R KFDE LSGLRVSPDVGKQMMDAIQEADKFFAKT +GMNSRHGSWPSNSVRK+LRDEMREFASERLQLVQAQGG+V M+KRKPVGMAFHWFL KPFG +AR SRL   DP+R+++K N++SPMF++LL P+  EV  P E  EETEIH+DVKQLQKV+ ILV+RHDER    PDV++DGT  GDPEKIK+EFYRG+
Sbjct:  142 QPALEELLTLYEDGVVDPEQPKTFVVAVRDCEDGDEAELEKRVGERLQAIWAAAVKPEGFAGSALSDVLDVKVFTLPHHSFASDEYLLGAGLLKNSVMDGAAGTPAVEVARLLQQVSSYAGPATESVGSNALTASFISSSAAVKCMASFKSLVGRMGAGFEELNTDFGELCDGVIDTVLQEYDEAVDGVSGASGVLSRKKAELKRHCLRELGLRHADQVDLLRTAARAKFDETLSGLRVSPDVGKQMMDAIQEADKFFAKTVRGMNSRHGSWPSNSVRKELRDEMREFASERLQLVQAQGGMVRMQKRKPVGMAFHWFLPKPFGQQARESRLDLTDPMRYTYKANQASPMFMELLCPSAQEVSLPSEGIEETEIHKDVKQLQKVSQILVRRHDERLTKAPDVFVDGTTRGDPEKIKREFYRGD 564          
BLAST of mRNA_L-elsbetiae_contig688.15633.1 vs. uniprot
Match: A0A6H5JTE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTE5_9PHAE)

HSP 1 Score: 250 bits (638), Expect = 7.490e-79
Identity = 120/159 (75.47%), Postives = 138/159 (86.79%), Query Frame = 0
Query:  265 MNSRHGSWPSNSVRKDLRDEMREFASERLQLVQAQGGLVNMKKRKPVGMAFHWFLKKPFGSEARRSRLSPDDPLRWSHKPNRSSPMFVDLLAPNGLEVEFPEELTEETEIHRDVKQLQKVAGILVKRHDERFDTPPDVYIDGTMEGDPEKIKKEFYRGE 423
            MNSRHGSWPSNSVRK+LRDEMREFASERLQLVQAQGG+V M+KRKPVGMAFHWFL KPFG +AR SRL   DP+R+++K N++SPMF++LL P   EVEFP E TEETEIH+DVKQLQKV+ ILV+RHDER    PDV+IDGT  GDPEKIK+EFYRG+
Sbjct:    1 MNSRHGSWPSNSVRKELRDEMREFASERLQLVQAQGGMVRMQKRKPVGMAFHWFLPKPFGQQARESRLDLTDPMRYTYKANQASPMFMELLCPPAQEVEFPSEGTEETEIHKDVKQLQKVSQILVRRHDERLTKAPDVFIDGTTRGDPEKIKREFYRGD 159          
BLAST of mRNA_L-elsbetiae_contig688.15633.1 vs. uniprot
Match: A0A6H5JWB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB1_9PHAE)

HSP 1 Score: 255 bits (652), Expect = 5.900e-73
Identity = 135/150 (90.00%), Postives = 142/150 (94.67%), Query Frame = 0
Query:    1 KPALEELLTLYEDGVVDPEQQKTFVVAVRDCEEGDEAELEKLVGERLQAIWAAAVKPEGFEGAALSDVLDVKVFTLPHHSFASDEYLLGAGLLKSSVMDGAADTPAEEVARLLQQVSSYAGPATEFVGGNALTASFVASSAAVKCMASFK 150
            +PALEELL LYEDGVVDPEQ KTFVVAVRDCE+GDEAELEK VGERLQAIWAAAVKPEGF G+ALSDVLDVKVFTLPHHSFASDEYLLGAGLLK+SVM+GAA TPA EVARLLQQVSSYAGPATE VG NALTASF++SSAAVKCMASFK
Sbjct:  142 QPALEELLALYEDGVVDPEQPKTFVVAVRDCEDGDEAELEKRVGERLQAIWAAAVKPEGFAGSALSDVLDVKVFTLPHHSFASDEYLLGAGLLKNSVMNGAAGTPAVEVARLLQQVSSYAGPATESVGSNALTASFISSSAAVKCMASFK 291          
BLAST of mRNA_L-elsbetiae_contig688.15633.1 vs. uniprot
Match: A0A835ZAQ3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAQ3_9STRA)

HSP 1 Score: 184 bits (467), Expect = 3.870e-49
Identity = 119/340 (35.00%), Postives = 188/340 (55.29%), Query Frame = 0
Query:   22 KTFVVAVRDC--EEGDEAELEKLVGERLQAIWAAAVKPEGFEGAALSDVLDVKVFTLPHHSFASDEYLLGAGLLKSSVMDGAADTPAEEVARLLQQVSSYA-GPATEFVGGNALTASFVASSAAVKCMASFKSLVGRMGAGFTE-LNTDFGELCDGVVDTVMEEYDVAVEGVSGASG---VLSRKKAELKRFCLRELGESHAAQIGLVRTASRGKFDEILSGLRVSPDVGKQMMDAIQEADKFFAKTAKGMNSRHGSWPSNSVRKDLRDEMREFASERLQLVQAQGGLVNMKKRKPVGMAFHWFLKKPFGSEARRSRLSPDDPLRWSHKPNRSSPMFVDL 354
            K  V AVRD   EE  + ++E  + E LQ +W  AV+P  F   +L DVLDV    LP HS A+ EY   A  L++ + +GA    A +V + LQ   + A G   E      L A+ VA +AA + +A+FK+ V  + A   + L+ +FG   D +VD  +++Y   V           V+ +K+ EL+   LRE    +AAQ  L+R A+  KF    + LR+SP +GK M  A++E+D + A++AKG+ S++     ++ R++L  ++R  A+ERLQL + QG +   K R+PVG+A HW L +PFG++A RS L   D   +S +  ++  ++ + 
Sbjct:  148 KPLVFAVRDFDGEEASQEQVEAAMTEALQRMWQRAVRPGDFAKKSLEDVLDVSFSFLPSHSLAAGEYAHAAAALRTRLAEGAKSATAADVLKTLQAAPAQATGAPVESTSPAELAAALVAKTAAAQALATFKNRVSALSASLADGLDPEFGAHVDIIVDEALDQYSQGVAAXXXXXXXXXVIGKKRGELRAAMLREAHGLYAAQFRLLRAAAADKFRRSPATLRISPTLGKDMDAAMKESDSYMAESAKGLKSKYLPALLDAERRELGSDLRAVAAERLQLAKLQG-MSAAKSRRPVGIALHWLLPEPFGTDASRSVLGAGDEPAFSSERLKADSLWFEF 486          
BLAST of mRNA_L-elsbetiae_contig688.15633.1 vs. uniprot
Match: R7Q4K7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4K7_CHOCR)

HSP 1 Score: 80.1 bits (196), Expect = 1.810e-12
Identity = 91/382 (23.82%), Postives = 165/382 (43.19%), Query Frame = 0
Query:    1 KPALEELLTLYEDGVV-DPEQQK-TFVVAVRDCEEGDEAELEKLVG--ERLQAIWAAAVKPEGFEGAALSDVLDVKVFTLPHHSFASDEYLLGAGLLKSSVMDGAADTPAEEVARLLQQVSS-------------YAGPATEFVGGNALTASFVASSAAVKCMASFKSLVGRMGAGFTELNTD-------FGELCDGVVDTVMEEYDVAVEGVSGASGVLSRKKAELKRFCLRELGESHAAQIGLVRTASRGKFDEILSGLRVSPD-VGKQMMDAIQEADKFFAKTAKGMNSRHGSWPSNSVRKDLRDEMREFASERLQLVQAQGGLVNM---------------KKRKPVGMAFHWFLKKPFG-SEARRSRLSPDDPLRWS 341
            + +L E+L + +DG++  P + K +F+V V+D E       E + G  + +  ++A+ VKP       ++++ + +   LP   F ++E+  G   ++S  +D AAD    E +   + V+              +   AT+      L ++F   +   K    +     + GA      TD       FG     +V+  +  YD       G S    RK+ ELK     +L      QIG +R  +   F + L G+      + K +   ++E+ K+F   A+ +  ++ SW  ++  K+L  +MRE A+ERLQ  +      N                K R+P+ ++FH+    PFG  +++  +LS DD L +S
Sbjct:  135 RSSLTEMLMMQDDGIIKQPNKDKRSFIVVVKDYESEVLTRQEIITGFLQSIHELYASLVKPSRCP-QRVTELFEFEFRLLPSDKFQAEEFENGLADMRSDFLDPAADNYLFEQSAFTRDVNVSLEDCAKGAWEKLFKEQATDMPNSVELMSTFDCGNVMRKVFEKY-----QRGARLWRRETDGGVIVENFGSAASKMVEGTVGVYDQDAASHKG-SKAFKRKRDELKGLLDADLYGLFVTQIGKLREITYRLFKDKLDGIGDDEARLEKAVNSTLKESQKYFQVNAELLRPKNTSWRFDNDTKELSQQMREDATERLQRARLADYQQNNGRRGRRRRPGLGPGEKSRQPIQVSFHYLDPAPFGWKDSKFEKLSVDDNLEYS 509          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig688.15633.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FSH8_ECTSI1.420e-24582.51RHD3b, RHD3/Sey1 family GTPase involved in the ER-... [more]
A0A6H5JTE5_9PHAE7.490e-7975.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWB1_9PHAE5.900e-7390.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZAQ3_9STRA3.870e-4935.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
R7Q4K7_CHOCR1.810e-1223.82Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008803RHD3/Sey1PFAMPF05879RHD3coord: 18..100
e-value: 4.2E-7
score: 28.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig688contigL-elsbetiae_contig688:118..8233 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig688.15633.1mRNA_L-elsbetiae_contig688.15633.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig688 118..8233 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig688.15633.1 ID=prot_L-elsbetiae_contig688.15633.1|Name=mRNA_L-elsbetiae_contig688.15633.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=430bp
KPALEELLTLYEDGVVDPEQQKTFVVAVRDCEEGDEAELEKLVGERLQAI
WAAAVKPEGFEGAALSDVLDVKVFTLPHHSFASDEYLLGAGLLKSSVMDG
AADTPAEEVARLLQQVSSYAGPATEFVGGNALTASFVASSAAVKCMASFK
SLVGRMGAGFTELNTDFGELCDGVVDTVMEEYDVAVEGVSGASGVLSRKK
AELKRFCLRELGESHAAQIGLVRTASRGKFDEILSGLRVSPDVGKQMMDA
IQEADKFFAKTAKGMNSRHGSWPSNSVRKDLRDEMREFASERLQLVQAQG
GLVNMKKRKPVGMAFHWFLKKPFGSEARRSRLSPDDPLRWSHKPNRSSPM
FVDLLAPNGLEVEFPEELTEETEIHRDVKQLQKVAGILVKRHDERFDTPP
DVYIDGTMEGDPEKIKKEFYRGEGDPIYQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008803RHD3/Sey1