mRNA_L-elsbetiae_contig6623.15348.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6623.15348.1
Unique NamemRNA_L-elsbetiae_contig6623.15348.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig6623.15348.1 vs. uniprot
Match: D7FL76_ECTSI (Tropinone reductase, putative / tropine dehydrogenase, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL76_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 1.360e-121
Identity = 182/216 (84.26%), Postives = 200/216 (92.59%), Query Frame = 3
Query:    3 EWKSKGLTVHGTAADVITAEGREALVESVEEHFDGLLDILVNNVGTSIRKATVDYTPEEFTHVMNTNFTSLFLLTQLLYPFLKAAAAIEGARENGGSSVVNISSVAGLTAIKSGTPYASSKAAMNQVTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASRVEEIIRRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGWMT 650
            EWKSKGL V GTAADV TAEGRE+LV+  EEHF GLLDILVNNVGT+IRKATVDYTPEE  +VM+TNFTSLFLLT+LL+P LKAAAA++G+RENGGSSV+NISSVAG+T IKSG+PYA+SKAAMNQVTR WGCEWAPDGIRVNAVAPWYTKTPLTEPVQAD  RV EI +RTPM RWADADEVSG+VAFLCM+GAGYITSQVI+TDGGFTANGWMT
Sbjct:   92 EWKSKGLLVEGTAADVTTAEGRESLVKLAEEHFGGLLDILVNNVGTNIRKATVDYTPEELAYVMDTNFTSLFLLTKLLHPLLKAAAAVKGSRENGGSSVINISSVAGITPIKSGSPYAASKAAMNQVTRLWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADPVRVNEITQRTPMKRWADADEVSGMVAFLCMKGAGYITSQVIATDGGFTANGWMT 307          
BLAST of mRNA_L-elsbetiae_contig6623.15348.1 vs. uniprot
Match: D7FL79_ECTSI (Tropinone reductase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL79_ECTSI)

HSP 1 Score: 284 bits (726), Expect = 1.570e-88
Identity = 143/216 (66.20%), Postives = 171/216 (79.17%), Query Frame = 3
Query:    3 EWKSKGLTVHGTAADVITAEGREALVESVEEHFDGLLDILVNNVGTSIRKA-TVDYTPEEFTHVMNTNFTSLFLLTQLLYPFLKAAAAIEGARENGGSSVVNISSVAGLTAIKSGTPYASSKAAMNQVTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASRVEEIIRRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGWM 647
            EW++KGL VHG A DV TAEGR+ L  + EEHFDG LDILVNNVG SIRK+ T D+TPEEF  ++NTNF+++  LT+L +P LKAAAA EGAR+ GGSSVVNISS+AG+TA+K+G  YA+SKAA+N++T NWGCEWA DGIRVNAVAP  T TP TE V     R  E++ R PMGRWAD  E+SG VAFLCM+GA YITSQVI  DGG+ +NGWM
Sbjct:   59 EWRAKGLEVHGIAVDVTTAEGRQELFSAAEEHFDGALDILVNNVGRSIRKSSTFDFTPEEFETIINTNFSTVLSLTKLFHPLLKAAAAAEGARDKGGSSVVNISSIAGVTAVKTGAAYAASKAAINRLTINWGCEWAKDGIRVNAVAPGATNTPSTESVP----RSTELMDRIPMGRWADPHEISGQVAFLCMKGASYITSQVICVDGGWASNGWM 270          
BLAST of mRNA_L-elsbetiae_contig6623.15348.1 vs. uniprot
Match: A0A835YM08_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM08_9STRA)

HSP 1 Score: 267 bits (683), Expect = 2.900e-82
Identity = 137/216 (63.43%), Postives = 161/216 (74.54%), Query Frame = 3
Query:    3 EWKSKGLTVHGTAADVITAEGREALVESVEEHFDGLLDILVNNVGTSIRKATVDYTPEEFTHVMNTNFTSLFLLTQLLYPFLKAAAAIEGARENGGSSVVNISSVAGLTAIKSGTPYASSKAAMNQVTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASRVEEIIRRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGWMT 650
            EW+++GL VHG+ ADV +AE R AL++ V E F G LDILVNNVGTSIR+ATVDYT EE  HV+  NF S F + QL +P LK A         GG SVVNI SVAG+T+IKSGTPYA+SKAAM++VT+N  CEWA DGIRVN VAPWYT TPL  PV  D  +  EI+ RTPM R A+A+EVS +VAFLCMRGA YIT QV+  DGGFT NGW+T
Sbjct:   52 EWRAQGLKVHGSVADVSSAEDRAALLQKVGEAFGGSLDILVNNVGTSIRRATVDYTSEEAEHVLRVNFHSCFAMMQLCHPLLKEA--------QGGGSVVNIGSVAGVTSIKSGTPYAASKAAMHKVTQNCACEWAGDGIRVNCVAPWYTNTPLASPVFEDKIKYAEILSRTPMKRIAEAEEVSALVAFLCMRGASYITGQVVCVDGGFTQNGWIT 259          
BLAST of mRNA_L-elsbetiae_contig6623.15348.1 vs. uniprot
Match: A0A6H5JMS4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMS4_9PHAE)

HSP 1 Score: 260 bits (664), Expect = 8.860e-79
Identity = 139/239 (58.16%), Postives = 168/239 (70.29%), Query Frame = 3
Query:    3 EWKSKGLTVHGTAADVITAEGREALVESVEEHFDGLLDILVNNVGTSIRKA-TVDYTPEEFTHVMNTNFTSLFLLTQ-----------------------LLYPFLKAAAAIEGARENGGSSVVNISSVAGLTAIKSGTPYASSKAAMNQVTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASRVEEIIRRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGWM 647
            EW++KGL V+G A DV TAEGR+ L  + EE FDG LDILVNNVG SIRK+ T DYTPEEF  +++TNF+++  LT+                       L +P LKAAAA EGAR  GGSSVVNISS+AG+ A+K+G  YA+SKAA+N++T NWGCEWA DGIRVNAVAP  T TP TE V     R  E++ R PMGRWA+  E+SG VAFLCM+GA YITSQVI  DGG+ +NGWM
Sbjct:   73 EWRAKGLEVYGIAVDVTTAEGRQELYSAAEERFDGALDILVNNVGRSIRKSSTFDYTPEEFETIIDTNFSTVLSLTKARLYVFTLICLGRFASLIPCSVFLFHPLLKAAAAAEGARAKGGSSVVNISSIAGVIAVKTGAAYAASKAAINRLTINWGCEWAKDGIRVNAVAPGATNTPSTESVP----RSTELMDRIPMGRWAEPHEISGQVAFLCMKGASYITSQVICVDGGWASNGWM 307          
BLAST of mRNA_L-elsbetiae_contig6623.15348.1 vs. uniprot
Match: A0A7C3PME0_9CYAN (SDR family oxidoreductase n=1 Tax=Oscillatoriales cyanobacterium SpSt-418 TaxID=2282169 RepID=A0A7C3PME0_9CYAN)

HSP 1 Score: 229 bits (583), Expect = 2.060e-67
Identity = 112/213 (52.58%), Postives = 153/213 (71.83%), Query Frame = 3
Query:    6 WKSKGLTVHGTAADVITAEGREALVESVEEHFDGLLDILVNNVGTSIRKATVDYTPEEFTHVMNTNFTSLFLLTQLLYPFLKAAAAIEGARENGGSSVVNISSVAGLTAIKSGTPYASSKAAMNQVTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASRVEEIIRRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGW 644
            W  +GL  +G  ADV T EGREA+++ ++E F G LDILVNNVGT+IRK  ++YTPEE+  +  TN TS+F L QL YPFLKA++          +S+VNI SVAGLT++++G PY  +KAA+ Q+TRN   EWA DGIRVN VAPW+ +TPLTEP+ +++  +E +I RTP+GR  + +E++G+V FLC+  A YIT Q I+ DGGF A G+
Sbjct:   60 WNQQGLPAYGVGADVATFEGREAVMQFLQETF-GRLDILVNNVGTNIRKKAIEYTPEEYDFIFQTNLTSVFELCQLTYPFLKASSQ---------ASIVNIGSVAGLTSVRTGAPYGMTKAALTQLTRNLAVEWASDGIRVNTVAPWFIRTPLTEPLLSNSDTIEAVIARTPLGRVGEPEEIAGLVTFLCLPTASYITGQCIAVDGGFLAYGF 262          
BLAST of mRNA_L-elsbetiae_contig6623.15348.1 vs. uniprot
Match: A0A7S3PZB4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZB4_9STRA)

HSP 1 Score: 230 bits (586), Expect = 2.280e-67
Identity = 117/221 (52.94%), Postives = 152/221 (68.78%), Query Frame = 3
Query:    3 EWKSKGLTVHGTAADVITAEGREALVESVEEHFD-------GLLDILVNNVGTSIRKATVDYTPEEFTHVMNTNFTSLFLLTQLLYPFLKAAAAIEGARENGGSSVVNISSVAGLTAIKSGTPYASSKAAMNQVTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASRVEEIIRRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGW 644
            EW+S+G+ V G  ADV T+EGRE+L+  +++  +       G LDILVNNVGT+IRK ++DY+ E+   V+ TNF S+F LT+L + FLK       +   G SS+VNI SVAG+T +KSGTPYA++KAAMNQVT NW CEW P GIRVN VAPWY  T L + V  +      ++ RTP GR  + +EV+ +VAFLC+ GAGYIT QVIS DGGFT N +
Sbjct:   72 EWRSEGIDVRGCVADVSTSEGRESLIGEMKKMINERDCANVGKLDILVNNVGTNIRKPSIDYSEEDLEFVLKTNFKSMFELTKLCHKFLKNEKVEGKSHCAGTSSIVNIGSVAGVTCMKSGTPYAATKAAMNQVTGNWACEWGPSGIRVNCVAPWYINTALAQQVLKNEDYKRSVLERTPAGRVGEPEEVASLVAFLCLPGAGYITGQVISVDGGFTRNSF 292          
BLAST of mRNA_L-elsbetiae_contig6623.15348.1 vs. uniprot
Match: A0A7S2WJY4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WJY4_9STRA)

HSP 1 Score: 229 bits (585), Expect = 3.620e-67
Identity = 119/220 (54.09%), Postives = 152/220 (69.09%), Query Frame = 3
Query:    3 EWKS-KGLTVHGTAADVITAEGREALVES----VEEHF-DGLLDILVNNVGTSIRKATVDYTPEEFTHVMNTNFTSLFLLTQLLYPFLKAAAAIEGARENGGSSVVNISSVAGLTAIKSGTPYASSKAAMNQVTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASRVEEIIRRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGW 644
            EW+   G++V G  ADV T +GR+ L+E     V+EH  +G LDIL+NNVGT+IRK TV+YT E+   ++NTN  S++ LT+L +P+LK             SSVVNI SVAG+T IKSGTPYA++KAAMNQ+T NW CEW PDGIRVN V PWY  TPL + V  D      ++ RTP GR  + +EV+G+VAFLC+  AGYIT Q+IS DGGFT NG+
Sbjct:   87 EWREVHGISVDGVVADVSTEKGRQDLIEKAHEFVQEHGKEGTLDILINNVGTNIRKPTVEYTSEDLDFIINTNLKSMYELTKLCHPYLK-----RDKNSTTTSSVVNIGSVAGVTCIKSGTPYAATKAAMNQLTGNWACEWGPDGIRVNCVTPWYINTPLAKQVLQDEEYKRTVLERTPAGRVGEPEEVAGLVAFLCLPRAGYITGQIISVDGGFTRNGY 301          
BLAST of mRNA_L-elsbetiae_contig6623.15348.1 vs. uniprot
Match: A0A7S1YHK1_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YHK1_9STRA)

HSP 1 Score: 225 bits (573), Expect = 1.600e-66
Identity = 120/216 (55.56%), Postives = 149/216 (68.98%), Query Frame = 3
Query:    3 EWKSKGLTVHGTAADVITAEGREALVESVEEHF-DGL-LDILVNNVGTSIRKATVDYTPEEFTHVMNTNFTSLFLLTQLLYPFLKAAAAIEGARENGGSSVVNISSVAGLTAIKSGTPYASSKAAMNQVTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASRVEEIIRRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGW 644
            EWK +G  V G  ADV T +GR  LV  +E    +G  LDILVNNVGT++RK +V+Y+ E+   V NTN  S+F LT + + FLK +       E   SSVVNI SVAG+T +KSGTPYAS+KAAMNQ+T NW CEW PDGIRVN VAPWY  TPL + V  + +    ++ RTPMGR  + +EV+G+VAFLC+  AGYIT QVIS DGGFT NG+
Sbjct:    2 EWKEQGCDVIGIVADVSTEDGRTELVTEIEAWLGEGQRLDILVNNVGTNVRKPSVEYSLEDAEFVWNTNLISMFRLTCMCHRFLKRSP-----EEGSTSSVVNIGSVAGVTCMKSGTPYASTKAAMNQLTGNWACEWGPDGIRVNCVAPWYINTPLAQQVLKNEAYKASVLERTPMGRVGEPEEVAGLVAFLCLPIAGYITGQVISVDGGFTKNGY 212          
BLAST of mRNA_L-elsbetiae_contig6623.15348.1 vs. uniprot
Match: A0A6U3WSM2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3WSM2_9STRA)

HSP 1 Score: 226 bits (576), Expect = 8.370e-66
Identity = 115/214 (53.74%), Postives = 149/214 (69.63%), Query Frame = 3
Query:    3 EWKSKGLTVHGTAADVITAEGREALVESVEEHFDGLLDILVNNVGTSIRKATVDYTPEEFTHVMNTNFTSLFLLTQLLYPFLKAAAAIEGARENGGSSVVNISSVAGLTAIKSGTPYASSKAAMNQVTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASRVEEIIRRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGW 644
            EW+ KG+ V G  ADV T EGREA+V  ++E   G LDILVNNVGT+IRK T++Y PE+   ++ TNF S+F LT++ +P+L+ +           SSVVNI SVAG+T +KSG+PYA +KAAMNQ+T N  CEW   GIR+N VAPWY  TPL + V  D    + ++ RTP+GR  + +EV+GIVAFLC+  AGYIT QVIS DGGFT  G+
Sbjct:   87 EWREKGMDVDGVVADVSTPEGREAIVSKIDE-VGGKLDILVNNVGTNIRKPTIEYAPEDLNFILQTNFVSMFELTKMCHPYLRQSYQDRKMT----SSVVNIGSVAGVTCMKSGSPYAITKAAMNQLTGNLACEWGLHGIRINCVAPWYINTPLAKQVLKDEEYKKSVLERTPVGRVGEPEEVAGIVAFLCLPIAGYITGQVISVDGGFTRQGF 295          
BLAST of mRNA_L-elsbetiae_contig6623.15348.1 vs. uniprot
Match: A0A7S0G8Q1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G8Q1_9STRA)

HSP 1 Score: 224 bits (570), Expect = 3.800e-65
Identity = 122/221 (55.20%), Postives = 148/221 (66.97%), Query Frame = 3
Query:    3 EWKSK-GLTVHGTAADVITAEGREALVESVEEHF-----DGLLDILVNNVGTSIRKATVDYTPEEFTHVMNTNFTSLFLLTQLLYPFLKAAAAIEGARENGG-SSVVNISSVAGLTAIKSGTPYASSKAAMNQVTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADASRVEEIIRRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANGW 644
            +W+ +  L VHG  ADV T EGRE L+    E F     D  LDILVNNVGT+IRK TVDYT EE   ++ TNF S+F +++L YP LK        +E+G  SSVVNI SVAG+T IKSGTPYA++KAAMNQ T N  CEW PD IRVN V PWY  TPL + V  D +    ++ RTP GR  + DEVS +VAFLC+  AG+IT Q+IS DGGFT NG+
Sbjct:   68 QWRDEQSLDVHGVVADVSTKEGRETLLLKANELFGSGGEDCELDILVNNVGTNIRKKTVDYTEEELEFILGTNFKSMFEMSKLCYPLLKRT------KESGKTSSVVNIGSVAGVTCIKSGTPYAATKAAMNQFTGNLACEWGPDNIRVNCVTPWYINTPLAKQVLKDEAFKRSVLERTPAGRVGEPDEVSSLVAFLCLPCAGFITGQIISVDGGFTRNGF 282          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6623.15348.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL76_ECTSI1.360e-12184.26Tropinone reductase, putative / tropine dehydrogen... [more]
D7FL79_ECTSI1.570e-8866.20Tropinone reductase, putative n=1 Tax=Ectocarpus s... [more]
A0A835YM08_9STRA2.900e-8263.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JMS4_9PHAE8.860e-7958.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7C3PME0_9CYAN2.060e-6752.58SDR family oxidoreductase n=1 Tax=Oscillatoriales ... [more]
A0A7S3PZB4_9STRA2.280e-6752.94Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2WJY4_9STRA3.620e-6754.09Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S1YHK1_9STRA1.600e-6655.56Hypothetical protein n=2 Tax=Grammatophora oceanic... [more]
A0A6U3WSM2_9STRA8.370e-6653.74Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S0G8Q1_9STRA3.800e-6555.20Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6623contigL-elsbetiae_contig6623:5496..9110 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score271.6
Seed ortholog evalue2.3e-70
Seed eggNOG ortholog2880.D7FL76
KEGG rclassRC00144
KEGG koko:K05354,ko:K08081
KEGG ReactionR02832,R06734
KEGG Pathwayko00960,ko01100,ko01110,map00960,map01100,map01110
Hectar predicted targeting categorysignal peptide
GOsGO:0002213,GO:0003674,GO:0003824,GO:0004022,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005829,GO:0006950,GO:0006952,GO:0007568,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0032502,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0055114
EggNOG free text desc.oxidation-reduction process
EggNOG OGsCOG1028@1,KOG0725@2759
EC1.1.1.206,1.1.1.236
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Ec32 ortholog descriptiontropinone reductase, putative / tropine dehydrogenase, putative
Ec32 orthologEc-19_005210.1
Exons5
Model size1757
Cds size462
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816733.7418237-UTR-L-elsbetiae_contig6623:5495..55811622816733.7418237-UTR-L-elsbetiae_contig6623:5495..5581Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6623 5496..5581 +
1691683773.5374033-UTR-L-elsbetiae_contig6623:5495..55811691683773.5374033-UTR-L-elsbetiae_contig6623:5495..5581Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6623 5496..5581 +
1622816733.752309-UTR-L-elsbetiae_contig6623:5939..60441622816733.752309-UTR-L-elsbetiae_contig6623:5939..6044Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6623 5940..6044 +
1691683773.550962-UTR-L-elsbetiae_contig6623:5939..60441691683773.550962-UTR-L-elsbetiae_contig6623:5939..6044Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6623 5940..6044 +
1622816733.8101523-UTR-L-elsbetiae_contig6623:8006..91101622816733.8101523-UTR-L-elsbetiae_contig6623:8006..9110Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6623 8007..9110 +
1691683773.5978363-UTR-L-elsbetiae_contig6623:8006..91101691683773.5978363-UTR-L-elsbetiae_contig6623:8006..9110Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6623 8007..9110 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816733.764554-CDS-L-elsbetiae_contig6623:6044..60831622816733.764554-CDS-L-elsbetiae_contig6623:6044..6083Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6623 6045..6083 +
1691683773.5601163-CDS-L-elsbetiae_contig6623:6044..60831691683773.5601163-CDS-L-elsbetiae_contig6623:6044..6083Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6623 6045..6083 +
1622816733.7748597-CDS-L-elsbetiae_contig6623:6712..68241622816733.7748597-CDS-L-elsbetiae_contig6623:6712..6824Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6623 6713..6824 +
1691683773.5686872-CDS-L-elsbetiae_contig6623:6712..68241691683773.5686872-CDS-L-elsbetiae_contig6623:6712..6824Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6623 6713..6824 +
1622816733.7853658-CDS-L-elsbetiae_contig6623:7227..73781622816733.7853658-CDS-L-elsbetiae_contig6623:7227..7378Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6623 7228..7378 +
1691683773.578628-CDS-L-elsbetiae_contig6623:7227..73781691683773.578628-CDS-L-elsbetiae_contig6623:7227..7378Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6623 7228..7378 +
1622816733.7995973-CDS-L-elsbetiae_contig6623:7846..80061622816733.7995973-CDS-L-elsbetiae_contig6623:7846..8006Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6623 7847..8006 +
1691683773.5870926-CDS-L-elsbetiae_contig6623:7846..80061691683773.5870926-CDS-L-elsbetiae_contig6623:7846..8006Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6623 7847..8006 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6623.15348.1prot_L-elsbetiae_contig6623.15348.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6623 6045..8006 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6623.15348.1

>prot_L-elsbetiae_contig6623.15348.1 ID=prot_L-elsbetiae_contig6623.15348.1|Name=mRNA_L-elsbetiae_contig6623.15348.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=154bp
MNTNFTSLFLLTQLLYPFLKAAAAIEGARENGGSSVVNISSVAGLTAIKS
GTPYASSKAAMNQVTRNWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADAS
RVEEIIRRTPMGRWADADEVSGIVAFLCMRGAGYITSQVISTDGGFTANG
WMT*
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mRNA from alignment at L-elsbetiae_contig6623:5496..9110+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6623.15348.1 ID=mRNA_L-elsbetiae_contig6623.15348.1|Name=mRNA_L-elsbetiae_contig6623.15348.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3615bp|location=Sequence derived from alignment at L-elsbetiae_contig6623:5496..9110+ (Laminarionema elsbetiae ELsaHSoW15)
AGGAATGGAAAAGTAAGGGCTTGACCGTGCACGGCACGGCAGCGGATGTT ATAACCGCTGAGGGGAGGGAGGCCTTGGTCGAATCGGTGAGCTGTCGCTC AGCCCGTTGATGCAGCGCTGCTTTTTTTTAGGTTGCCTTAGTTTCCGGAA TCATCTTCCGCCGCATGTTGCTATACATGTCACCCAGACGCAGTCTAAGC GTTCGTTCGTTGAATAGCATCCTGTCTCATGCGCCGCTTACGTGTGATGG CTTCATTGCTGTGCAAGCTGAATTCAGCTCTGTGCTGCCGATTGCTCGGT TTGGTATCTTCCTTGCTGTTCACGCTGATGCAAAACCACGTACATATGAT ATGTATATATATCTGGCGATTGCTTTCCTCTCCTCACTCTATCTCTCTCT CTCCCTTCTCTCGTTGGTTGTCCCCTCTACCCACGCTGCTGCAGGTGGAA GAACATTTCGATGGGCTACTGGACATCCTAGTCAACAACGTGGGCACCAG CATTCGCAAGGCTACGGTGGACTACACGCCGGAAGAGTTCACCCATGTCA TGAACACCAACTTCACGTCGCTCTTTCTGCTGACACAGGTCTGCAAGCTG GTCTGGGCTATTTTGTTTGGTCGCATGCGTGAGTTGCTCGTTTTGTCGCC ATGTTTTGGATTTTCCTCCCCGCATAAAAGGGGTATAAGATATACTCCGT AGCTCCTTAAGAGGTACCCTGCCCCCACGGCCTTCCGAAAAATTGCGTCC TTCCTGGCGAAGAGGCAGCTTGCCATCGCAGTCCGCGGCCGTCCCATTTT TTCTTCCAAGCAAGCAAACGCTCAGGTTTTGGCGTGCGGATACATGCCAT TCTGTAGCCGTTTCTTTTTCTGTGAAAAGCGGACGCCGCCCTTGTCTTTA TGCTTGGCCGGCGTACCGGCGGTTATGATACGTTTCCCAACTTTTCTACG TTCCCGCTGCCAGATAGAAAACGACCGTTACTGCTTTTGCGCAGGCAATT TACGTTCGATAGGACATGAAGGGCCTTCAATAGTTTGCCAAGTCCGCAGA TATCAGGCTCGCAGGCCAAACTATATACGGAGTATTTGTTTCCGGAGCCT TGCAAAAAGCTGCTTTCGGATCAGTGCTAATTTTTCATATACACTACTCT CGGATCCATATCCGTCAGCGATTTTGTTTTTTCTTCTGCCCCTCCCCACC CGCTGGCATCCGTGCAGCTGCTCTACCCTTTCCTGAAGGCGGCGGCGGCG ATAGAGGGAGCAAGGGAGAACGGAGGGTCTTCCGTGGTGAACATCTCAAG CGTTGCCGGCCTCACGGCTATAAAGTCAGGTATGTATTTGAATTGAAGCA CATCGTTTTGCAGAAGGTTGTCCTCCTACACCTGTCCAATGGCAGACCTA TATGATAATATTAAGGCGCAGTGGTTAAGTGAAGGCAGATGAAATCCCTA GCTTTCATCGAGCAGACACCATTGGGAATATTGAAGTAAGCTGTTATTTT CCTGGGCCATACGCTCGCGGGGCGATGTCCTTACCAATGCCATTCCAATT TAGACTTGCGAAACCCGAACAAAGGCCCAATACGTGACTTGCTCCATACA TACGTATGTGGACCGTCTTTGAAACGCTTTGCACGCCTTCATGTACTCAT CGGGTGATGCCATTGTTTGACACAATGTTTACTGTATAGAGTCTCCGCCT CACATTCTCGCCGCACGTTTTGGGTTTCGCAGGAACTCCTTACGCGTCGA GTAAAGCCGCCATGAACCAGGTGACTCGTAACTGGGGTTGTGAGTGGGCT CCGGACGGGATTAGGGTTAACGCGGTCGCGCCGTGGTATACTAAGACGCC GTTGACGGAGCCGGTCCAAGCAGATGCCTCAAGGTGAGGTTTCCTTGTGT GTCCCGTGGAAACTTCTTTTATCTTCCAGGCTCGGAGAGGTTTACATCCA CTACACTGGCCGTGTCGTCTTGCTTACCCCATGTGCAAATTGTTTCTATT TTTCATAAACATTAAACCGCTCTCACATGTTTAGTGTGTTTATGAGTGCA TCACTTACGCTACTCGGTGTGCCACGTTTTTGGCGGGTTCTACATATATA TAGCGCAGAACCGCTTTGCAAGTGAGTCCACATCCAAAAATGTGAGGTGG GGTGTTTGCAACTGCTACACGCCGAATGCTCACTTTTCTCACCCACACAA GCTGCCCGCTTTGACGAACTCGTATATGGCACAATTTCATGTTTTGTTTG TATCGGCACCCTTTTTTTTGTAGGTGTGTGCCTATTTTATTTGCCTGCAT CTTTCCGACGCCTTTCAGCCTCCTCTGCGCGTGTCTACGTGTCCCGCCCA GGGTTGAGGAGATCATTCGACGCACCCCGATGGGACGATGGGCGGATGCG GACGAAGTTAGCGGCATCGTGGCTTTCCTCTGCATGAGGGGCGCCGGCTA TATCACGTCGCAGGTCATCTCCACAGATGGTGGCTTCACGGCCAACGGGT GGATGACCTAACGTGCGGAAGTGTTTACTTTTATATGCTGTACTCTGCCT GGGTGTTTTGCCGAGCAGATTTTACAAGCCAGTGAGGACGCAGCATAGAC GAAGTCAGGGAAGCCGGAGGTGAAAGCTGCGCGGTCTCAGAGCACAGCAG TAGTGCTCCACAAACTGTTGTTCGCTGTTCACGTACTGCATGTTATTCAC GGGAGACATTCAAGACCCCATACAAGCTGGTTCAGATTGAACGCCCAAAA TGTATTGCACGCCTCATAACGGACGTAATACAAGCTCGATTTTTATGAGA CTTATATCTTACAACAGGGTGACATTTTTGTTTTCCCGAATTACGGCTTG GGTGCGACGCTGCGGGCGAACATGTAGTCTTGGCCAATCAGCGGCCTCCA AACTGTCCAGAATTAAAAATCCGATTTTTAACCCAATGTGCTGTCCGACC CCCACAAGGAAGAGTTCACAGCAACTGTTACTCTCTAGGAAACCTAACAA AAAAAACTGTTTCGAAAACGGTTACCCTGGCATCGAGTTACCTTAATATA CCTTGAGAACGCCCCGGGGGGCGATCTTAACTTTTAGATGAAAAAGATCG CCCCGGGGCATTCTCTAAGGTAGGGGGGCGATCTTTCCGCAAAAAATAAA AACGCCCCGGGGCCGAAAAGTCCCCCGGGGCGTGGTGTTCTTTTTTCCTT GCCACACACACACACCTCACATTTGCGACCTCACAAGATGGCTGTAGCCA TTGAGTCAGAGCCGATTTTCATGGGGCGTGAGTAACGTAGGGAAAGGCCG GGGAGAATTCGTCGCGAATGATGTGTGCTGCTGTGTTCGACGAATTACGT TCGTTGTTATTTTGTTTTGGTTTTGTGTCTCTTCGTCTGGGCATGCTTTG TTTGAAAGCGTGGTGCAATCACTCGTAGCTGCTGCTCTCGCTATTTACCG TTAGTTCAAGAAGCGAATACCGTAGTCCATGGATATGCGCAAGAGTAGAG ATTGATGTGCGGTGCGTTTTGGTTCTGTTCGCCGTCAGTGTGCAAGCAGG CTTGAGTAAACTTCACGTGGGAAGCTTAAAAATTAATAATAACTACTGTT GACAACACTCTTGAT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6623:5496..9110+

>mRNA_L-elsbetiae_contig6623.15348.1 ID=mRNA_L-elsbetiae_contig6623.15348.1|Name=mRNA_L-elsbetiae_contig6623.15348.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=924bp|location=Sequence derived from alignment at L-elsbetiae_contig6623:5496..9110+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAACACCAACTTCACGTCGCTCTTTCTGCTGACACAGATGAACACCAA
CTTCACGTCGCTCTTTCTGCTGACACAGCTGCTCTACCCTTTCCTGAAGG
CGGCGGCGGCGATAGAGGGAGCAAGGGAGAACGGAGGGTCTTCCGTGGTG
AACATCTCAAGCGTTGCCGGCCTCACGGCTATAAAGTCAGCTGCTCTACC
CTTTCCTGAAGGCGGCGGCGGCGATAGAGGGAGCAAGGGAGAACGGAGGG
TCTTCCGTGGTGAACATCTCAAGCGTTGCCGGCCTCACGGCTATAAAGTC
AGGAACTCCTTACGCGTCGAGTAAAGCCGCCATGAACCAGGTGACTCGTA
ACTGGGGTTGTGAGTGGGCTCCGGACGGGATTAGGGTTAACGCGGTCGCG
CCGTGGTATACTAAGACGCCGTTGACGGAGCCGGTCCAAGCAGATGCCTC
AAGGAACTCCTTACGCGTCGAGTAAAGCCGCCATGAACCAGGTGACTCGT
AACTGGGGTTGTGAGTGGGCTCCGGACGGGATTAGGGTTAACGCGGTCGC
GCCGTGGTATACTAAGACGCCGTTGACGGAGCCGGTCCAAGCAGATGCCT
CAAGGGTTGAGGAGATCATTCGACGCACCCCGATGGGACGATGGGCGGAT
GCGGACGAAGTTAGCGGCATCGTGGCTTTCCTCTGCATGAGGGGCGCCGG
CTATATCACGTCGCAGGTCATCTCCACAGATGGTGGCTTCACGGCCAACG
GGTGGATGACCTAAGGTTGAGGAGATCATTCGACGCACCCCGATGGGACG
ATGGGCGGATGCGGACGAAGTTAGCGGCATCGTGGCTTTCCTCTGCATGA
GGGGCGCCGGCTATATCACGTCGCAGGTCATCTCCACAGATGGTGGCTTC
ACGGCCAACGGGTGGATGACCTAA
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