mRNA_L-elsbetiae_contig6596.15303.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6596.15303.1
Unique NamemRNA_L-elsbetiae_contig6596.15303.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig6596.15303.1 vs. uniprot
Match: A0A6H5KGK9_9PHAE (Glycine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGK9_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 3.640e-79
Identity = 131/149 (87.92%), Postives = 140/149 (93.96%), Query Frame = 1 
Query:    1 GAAADAIKAEVEKLQSFKASLAAATAAAGSTSTFDRKAMDDLVIRRMFVVPSFEIHGGVSGLFDLGPPGCGLKGNVVSLWKQHFVLAEGMLEMECTNLTPENVLQTSGHVEKFTDLMVKDTVTGESLRADKLLEDIIDDLLAKNPAMPT 447
            GAAA+AI+AEV KLQ  KASLA ATAA  +TSTFD KAMDDLVIRRMFVVPSFEIHGGVSGL+DLGPPGCGLKGN+VSLWKQHF+LAEGMLEMECTNLTPENVLQTSGHV++FTDLMVKDT TGESLRADKLLEDIID LLA+NPAMPT
Sbjct:  104 GAAAEAIQAEVAKLQGLKASLAKATAAVEATSTFDGKAMDDLVIRRMFVVPSFEIHGGVSGLYDLGPPGCGLKGNIVSLWKQHFILAEGMLEMECTNLTPENVLQTSGHVDRFTDLMVKDTETGESLRADKLLEDIIDKLLAENPAMPT 252
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BLAST of mRNA_L-elsbetiae_contig6596.15303.1 vs. uniprot
Match: D7FJG6_ECTSI (Glycyl-tRNA Synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJG6_ECTSI)

HSP 1 Score: 256 bits (654), Expect = 1.610e-76
Identity = 130/149 (87.25%), Postives = 140/149 (93.96%), Query Frame = 1 
Query:    1 GAAADAIKAEVEKLQSFKASLAAATAAAGSTSTFDRKAMDDLVIRRMFVVPSFEIHGGVSGLFDLGPPGCGLKGNVVSLWKQHFVLAEGMLEMECTNLTPENVLQTSGHVEKFTDLMVKDTVTGESLRADKLLEDIIDDLLAKNPAMPT 447
            GAAA+AI+AEV KLQ  KASLA ATAA  +TSTFD KAMDDLVIRRMFVVPSFEIHGGVSGL+DLGPPGCGLKGN+VSLWKQHF+LAEGMLEMECTNLTPENVLQTSGHV++FTDLMVKDT TGESLRADKLLEDIID LLA++PAMPT
Sbjct:  509 GAAAEAIQAEVGKLQGLKASLAKATAAVEATSTFDGKAMDDLVIRRMFVVPSFEIHGGVSGLYDLGPPGCGLKGNIVSLWKQHFILAEGMLEMECTNLTPENVLQTSGHVDRFTDLMVKDTETGESLRADKLLEDIIDKLLAESPAMPT 657
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BLAST of mRNA_L-elsbetiae_contig6596.15303.1 vs. uniprot
Match: A0A836C9B2_9STRA (Glycine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9B2_9STRA)

HSP 1 Score: 207 bits (527), Expect = 3.690e-60
Identity = 105/148 (70.95%), Postives = 115/148 (77.70%), Query Frame = 1 
Query:    1 GAAADAIKAEVEKLQSFKASLAAATAAAGSTSTFDRKAMDDLVIRRMFVVPSFEIHGGVSGLFDLGPPGCGLKGNVVSLWKQHFVLAEGMLEMECTNLTPENVLQTSGHVEKFTDLMVKDTVTGESLRADKLLEDIIDDLLAKNPAMP 444
            G   D + A V KL   KA+LA A A A  T TFDRKA +D V+RRMFVVPSFEIHGGV+GLFDLGPP CGLK N+V  W++HFVLAE MLEMECTNLTP  VL+TSGHV+KFTDLMVKD  TGE  RADKLLED ID LL  NPAMP
Sbjct:   75 GVTGDELVAAVAKLTEAKAALAQAQAQAAPTDTFDRKAFEDTVVRRMFVVPSFEIHGGVAGLFDLGPPACGLKANIVDTWRKHFVLAENMLEMECTNLTPHAVLKTSGHVDKFTDLMVKDVATGEPFRADKLLEDHIDALLEANPAMP 222
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BLAST of mRNA_L-elsbetiae_contig6596.15303.1 vs. uniprot
Match: A0A7S0UF00_9STRA (Glycine--tRNA ligase (Fragment) n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UF00_9STRA)

HSP 1 Score: 192 bits (489), Expect = 5.620e-56
Identity = 100/150 (66.67%), Postives = 115/150 (76.67%), Query Frame = 1 
Query:    1 GAAADAIKAEVEKLQSFKASLAA-ATAAAGSTSTFDRKAMDDLVIRRMFVVPSFEIHGGVSGLFDLGPPGCGLKGNVVSLWKQHFVLAEGMLEMECTNLTPENVLQTSGHVEKFTDLMVKDTVTGESLRADKLLEDIIDDLLAKNPAMPT 447
            GA ADAI+  V  LQ+ K S    A   A S   F+RK+ DDL+IR+MFVVPSFEIHGGV GLFDLGPP CGLK  +V +W++HFVLAE MLEMECTNLTPE VL+TSGHV++FTDLMVKD  T E  RADKLLED IDDLL +NP + T
Sbjct:    3 GADADAIQQAVAALQALKISAGGLAEKIAASEPEFNRKSFDDLIIRKMFVVPSFEIHGGVKGLFDLGPPACGLKAAMVDVWRKHFVLAENMLEMECTNLTPEVVLKTSGHVDRFTDLMVKDPATQECFRADKLLEDAIDDLLEENPTLDT 152
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BLAST of mRNA_L-elsbetiae_contig6596.15303.1 vs. uniprot
Match: K0T5F7_THAOC (WHEP-TRS domain-containing protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T5F7_THAOC)

HSP 1 Score: 182 bits (461), Expect = 2.500e-54
Identity = 94/152 (61.84%), Postives = 115/152 (75.66%), Query Frame = 1 
Query:    1 GAAADAIKA---EVEKLQSFKASLAAATAAAGSTSTFDRKAMDDLVIRRMFVVPSFEIHGGVSGLFDLGPPGCGLKGNVVSLWKQHFVLAEGMLEMECTNLTPENVLQTSGHVEKFTDLMVKDTVTGESLRADKLLEDIIDDLLAKNPAMPT 447
            G+A +A+KA   E E L+  K  L         T  F+RK+ D+L++R+MF+VPSFEIHGGV GLFDLGPP CGLK  +V +W++HFVLAE MLEMECT LTPE VL+TSGHV++FTDLMVKD V+GE  RADKLLED ID+L+  NP MPT
Sbjct:   41 GSAVEALKALKLEAEVLRLKKEEL-------DPTVQFNRKSFDELILRKMFIVPSFEIHGGVKGLFDLGPPACGLKAAMVDVWRKHFVLAESMLEMECTCLTPEVVLKTSGHVDRFTDLMVKDPVSGECFRADKLLEDAIDELIEGNPDMPT 185
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BLAST of mRNA_L-elsbetiae_contig6596.15303.1 vs. uniprot
Match: A0A7S2RN73_9STRA (Glycine--tRNA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RN73_9STRA)

HSP 1 Score: 191 bits (484), Expect = 3.260e-54
Identity = 95/144 (65.97%), Postives = 112/144 (77.78%), Query Frame = 1 
Query:   28 EVEKLQSFKASLAAATAAAGSTST----FDRKAMDDLVIRRMFVVPSFEIHGGVSGLFDLGPPGCGLKGNVVSLWKQHFVLAEGMLEMECTNLTPENVLQTSGHVEKFTDLMVKDTVTGESLRADKLLEDIIDDLLAKNPAMPT 447
            E+E+ Q   A L    AAA +T T    FDRKA +D ++R+MFVVPSFEIHGGV GLFDLGPP C LK NV+ LW++HFVL E MLEMECTNLTP+ VL+TSGHV+KFTD+MVKD  TGE  RADKLLED+ID+L+  NP MPT
Sbjct:   43 ELEQAQGALAQLRDRLAAAQATQTDKVDFDRKAFEDTILRKMFVVPSFEIHGGVKGLFDLGPPACALKANVLDLWRKHFVLEENMLEMECTNLTPQAVLKTSGHVDKFTDMMVKDVETGECFRADKLLEDVIDNLIDGNPDMPT 186
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BLAST of mRNA_L-elsbetiae_contig6596.15303.1 vs. uniprot
Match: F0YGP2_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGP2_AURAN)

HSP 1 Score: 179 bits (454), Expect = 3.440e-54
Identity = 94/152 (61.84%), Postives = 115/152 (75.66%), Query Frame = 1 
Query:    1 GAAADAIKAEVEKLQSFKASLAAATAAAGST---STFDRKAMDDLVIRRMFVVPSFEIHGGVSGLFDLGPPGCGLKGNVVSLWKQHFVLAEGMLEMECTNLTPENVLQTSGHVEKFTDLMVKDTVTGESLRADKLLEDIIDDLLAKNPAMPT 447
            GAA + I++ V++L + +  LAAAT A  S    ++ +RK  D+ V+RRMFVVP+FEIHGGV+GLFDLGPPGC LK NVV +W++HFVL E MLEMECT LTPE VL+TSGHV++FTDLMVKD  TG+  RADKLLED ID LL      PT
Sbjct:    5 GAAPEKIQSAVDELHTLRNDLAAATVALESDEFENSLNRKLFDETVLRRMFVVPAFEIHGGVTGLFDLGPPGCALKANVVDMWRRHFVLEEKMLEMECTCLTPEPVLKTSGHVDRFTDLMVKDIETGDCYRADKLLEDHIDALLNGGTVAPT 156
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BLAST of mRNA_L-elsbetiae_contig6596.15303.1 vs. uniprot
Match: A0A7S2V639_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V639_9STRA)

HSP 1 Score: 176 bits (445), Expect = 6.390e-54
Identity = 87/137 (63.50%), Postives = 109/137 (79.56%), Query Frame = 1 
Query:   37 KLQSFKASLAAATAAAGST--STFDRKAMDDLVIRRMFVVPSFEIHGGVSGLFDLGPPGCGLKGNVVSLWKQHFVLAEGMLEMECTNLTPENVLQTSGHVEKFTDLMVKDTVTGESLRADKLLEDIIDDLLAKNPAM 441
            KLQ+ KA + AA  +AG    ++ +++A+DDL++RRMFVVP+FEIHGGV+GLFDLGPP C LK NVV  W++HFVL E MLEMECT +TPE VL+TSGHV+KFTDLMVKD  TGE  RADKLLED ID L+ ++  +
Sbjct:    1 KLQALKAKVEAALKSAGPAPDTSAEKRAVDDLLLRRMFVVPAFEIHGGVAGLFDLGPPACALKANVVDQWRRHFVLEENMLEMECTCMTPEPVLKTSGHVDKFTDLMVKDLETGECFRADKLLEDFIDKLIDEDQTL 137
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BLAST of mRNA_L-elsbetiae_contig6596.15303.1 vs. uniprot
Match: A0A1Z5KMP6_FISSO (Glycine--tRNA ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KMP6_FISSO)

HSP 1 Score: 188 bits (478), Expect = 2.120e-53
Identity = 98/149 (65.77%), Postives = 116/149 (77.85%), Query Frame = 1 
Query:   10 ADAIKAEVEKLQSFKASLAAATAA----AGSTSTFDRKAMDDLVIRRMFVVPSFEIHGGVSGLFDLGPPGCGLKGNVVSLWKQHFVLAEGMLEMECTNLTPENVLQTSGHVEKFTDLMVKDTVTGESLRADKLLEDIIDDLLAKNPAMP 444
            ADAI   VE+LQ+ K  L AAT      AG T  F+RK+ DDL++R+MFV+PSFEIHGGV GLFDLGPP C LK  ++ +W++HFVLAE MLEMECT LTP+ VL+TSGHV++FTDLMVKD  TGE  RADKLLED IDDL+ KNP MP
Sbjct:   37 ADAIGEAVEQLQALK--LEAATLQDKLQAGETQ-FNRKSFDDLILRKMFVIPSFEIHGGVKGLFDLGPPACALKAAMIDMWRKHFVLAENMLEMECTCLTPQVVLKTSGHVDRFTDLMVKDPATGECFRADKLLEDAIDDLIEKNPTMP 182
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BLAST of mRNA_L-elsbetiae_contig6596.15303.1 vs. uniprot
Match: A0A7S3LGH7_9STRA (Glycine--tRNA ligase (Fragment) n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LGH7_9STRA)

HSP 1 Score: 183 bits (465), Expect = 3.890e-53
Identity = 86/116 (74.14%), Postives = 98/116 (84.48%), Query Frame = 1 
Query:  100 FDRKAMDDLVIRRMFVVPSFEIHGGVSGLFDLGPPGCGLKGNVVSLWKQHFVLAEGMLEMECTNLTPENVLQTSGHVEKFTDLMVKDTVTGESLRADKLLEDIIDDLLAKNPAMPT 447
            F+RKA DDLV+R+MFVVPSFEIHGGV GLFDLGPP C LK  ++ LW++HFVL E MLEMECTNLTPE VL+TSGHV++FTDLMVKD  TGE  RADKLLED ID LL +NP MP+
Sbjct:  124 FNRKAFDDLVLRKMFVVPSFEIHGGVKGLFDLGPPACALKAAMIDLWRKHFVLNESMLEMECTNLTPEVVLKTSGHVDRFTDLMVKDVATGECFRADKLLEDAIDRLLDENPTMPS 239
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6596.15303.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGK9_9PHAE3.640e-7987.92Glycine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1... [more]
D7FJG6_ECTSI1.610e-7687.25Glycyl-tRNA Synthetase n=1 Tax=Ectocarpus siliculo... [more]
A0A836C9B2_9STRA3.690e-6070.95Glycine--tRNA ligase n=1 Tax=Tribonema minus TaxID... [more]
A0A7S0UF00_9STRA5.620e-5666.67Glycine--tRNA ligase (Fragment) n=1 Tax=Pseudo-nit... [more]
K0T5F7_THAOC2.500e-5461.84WHEP-TRS domain-containing protein n=2 Tax=Thalass... [more]
A0A7S2RN73_9STRA3.260e-5465.97Glycine--tRNA ligase n=1 Tax=Rhizochromulina marin... [more]
F0YGP2_AURAN3.440e-5461.84Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S2V639_9STRA6.390e-5463.50Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A1Z5KMP6_FISSO2.120e-5365.77Glycine--tRNA ligase n=2 Tax=Fistulifera solaris T... [more]
A0A7S3LGH7_9STRA3.890e-5374.14Glycine--tRNA ligase (Fragment) n=2 Tax=Amphora co... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6596contigL-elsbetiae_contig6596:7828..9430 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score257.7
Seed ortholog evalue3.4e-66
Seed eggNOG ortholog2880.D7FJG6
Preferred namePRMT7
KEGG rclassRC00003,RC00055,RC00523,RC02120
KEGG koko:K01880,ko:K11438
KEGG ReactionR03654,R11216
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000166,GO:0000287,GO:0000375,GO:0000377,GO:0000387,GO:0000398,GO:0000902,GO:0000904,GO:0000959,GO:0001650,GO:0002164,GO:0002181,GO:0002376,GO:0002520,GO:0003674,GO:0003824,GO:0004081,GO:0004551,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005759,GO:0005768,GO:0005794,GO:0005802,GO:0005829,GO:0006082,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006325,GO:0006349,GO:0006351,GO:0006353,GO:0006355,GO:0006396,GO:0006397,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006464,GO:0006479,GO:0006518,GO:0006520,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007275,GO:0007276,GO:0007399,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008380,GO:0008469,GO:0008757,GO:0008796,GO:0009058,GO:0009059,GO:0009117,GO:0009165,GO:0009345,GO:0009653,GO:0009791,GO:0009889,GO:0009987,GO:0010035,GO:0010038,GO:0010467,GO:0010468,GO:0010556,GO:0012505,GO:0015959,GO:0015960,GO:0015965,GO:0015966,GO:0016043,GO:0016070,GO:0016071,GO:0016273,GO:0016274,GO:0016277,GO:0016358,GO:0016462,GO:0016569,GO:0016570,GO:0016571,GO:0016594,GO:0016597,GO:0016740,GO:0016741,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016875,GO:0017076,GO:0018130,GO:0018193,GO:0018195,GO:0018216,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019637,GO:0019752,GO:0019918,GO:0019919,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0030030,GO:0030097,GO:0030141,GO:0030154,GO:0030182,GO:0030424,GO:0030554,GO:0031175,GO:0031323,GO:0031326,GO:0031406,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0032259,GO:0032501,GO:0032502,GO:0032504,GO:0032543,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032989,GO:0032990,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0034969,GO:0035166,GO:0035167,GO:0035241,GO:0035242,GO:0035243,GO:0035246,GO:0035247,GO:0035639,GO:0036094,GO:0036211,GO:0040029,GO:0042054,GO:0042165,GO:0042221,GO:0042393,GO:0042802,GO:0042803,GO:0042995,GO:0043005,GO:0043021,GO:0043038,GO:0043039,GO:0043043,GO:0043046,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043230,GO:0043231,GO:0043232,GO:0043233,GO:0043393,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0043985,GO:0044020,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044421,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044431,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0044703,GO:0044728,GO:0044877,GO:0046483,GO:0046686,GO:0046872,GO:0046983,GO:0048468,GO:0048513,GO:0048534,GO:0048542,GO:0048569,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048732,GO:0048812,GO:0048813,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051098,GO:0051171,GO:0051252,GO:0051276,GO:0051704,GO:0055086,GO:0060255,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070062,GO:0070127,GO:0070150,GO:0071514,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0090407,GO:0097159,GO:0097367,GO:0097458,GO:0097659,GO:0097708,GO:0098791,GO:0099503,GO:0120025,GO:0120036,GO:0120039,GO:0140053,GO:0140096,GO:0140098,GO:0140101,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1903506,GO:1903561,GO:2000112,GO:2001141
EggNOG free text desc.peptidyl-arginine methylation, to symmetrical-dimethyl arginine
EggNOG OGsCOG0423@1,COG0500@1,KOG1501@2759,KOG2298@2759
Ec32 ortholog descriptionGlycyl-tRNA Synthetase
Ec32 orthologEc-14_006280.1
EC2.1.1.321,6.1.1.14
COG Functional cat.Q
BiGG ReactioniMM904.YPR081C,iND750.YPR081C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029,ko03036
Exons3
Model size456
Cds size456
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6596.15303.1prot_L-elsbetiae_contig6596.15303.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6596 7828..9430 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816728.775659-CDS-L-elsbetiae_contig6596:7827..79611622816728.775659-CDS-L-elsbetiae_contig6596:7827..7961Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6596 7828..7961 -
1691683770.0270252-CDS-L-elsbetiae_contig6596:7827..79611691683770.0270252-CDS-L-elsbetiae_contig6596:7827..7961Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6596 7828..7961 -
1622816728.7858768-CDS-L-elsbetiae_contig6596:8569..87791622816728.7858768-CDS-L-elsbetiae_contig6596:8569..8779Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6596 8570..8779 -
1691683770.042636-CDS-L-elsbetiae_contig6596:8569..87791691683770.042636-CDS-L-elsbetiae_contig6596:8569..8779Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6596 8570..8779 -
1622816728.795873-CDS-L-elsbetiae_contig6596:9318..94301622816728.795873-CDS-L-elsbetiae_contig6596:9318..9430Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6596 9319..9430 -
1691683770.0553632-CDS-L-elsbetiae_contig6596:9318..94301691683770.0553632-CDS-L-elsbetiae_contig6596:9318..9430Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6596 9319..9430 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6596.15303.1

>prot_L-elsbetiae_contig6596.15303.1 ID=prot_L-elsbetiae_contig6596.15303.1|Name=mRNA_L-elsbetiae_contig6596.15303.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=152bp
GAAADAIKAEVEKLQSFKASLAAATAAAGSTSTFDRKAMDDLVIRRMFVV
PSFEIHGGVSGLFDLGPPGCGLKGNVVSLWKQHFVLAEGMLEMECTNLTP
ENVLQTSGHVEKFTDLMVKDTVTGESLRADKLLEDIIDDLLAKNPAMPTV
R*
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mRNA from alignment at L-elsbetiae_contig6596:7828..9430-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6596.15303.1 ID=mRNA_L-elsbetiae_contig6596.15303.1|Name=mRNA_L-elsbetiae_contig6596.15303.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1603bp|location=Sequence derived from alignment at L-elsbetiae_contig6596:7828..9430- (Laminarionema elsbetiae ELsaHSoW15)
GGAGCGGCAGCGGACGCGATTAAGGCGGAGGTTGAGAAGCTGCAGAGCTT
CAAGGCTTCTCTGGCAGCTGCAACAGCGGCGGCAGGGTCCACAAGCACCT
TCGACCGGAAAGGTGTGTCGGTGTGTCCCCCATCACTGCTGTCTGCGTGT
GTCCGTTTTCTGTTCGATGGTCTGATTCCCCGGGGGGGGGGTTCACGTTA
GGTATTTTCCGTCTGCGCCATACCTCTGCTGCTTGCGTTGGTTGTTTGTT
TGTCGTCGTTTGTTGTTGGCTCTGCTGCTGTGATGCTGTGGTGTGAGACC
GAGGAGGGGGGTTGTTTGTGCAAGGTGTGGGATTTGATCAACACCTTCGG
CAAGCCACGCCGGATGTGCACCCCTCAAAGCACTACAGTACGTAACTCGA
GTGTTGCGTGTGCAGCAACATATTCTACCATGGCCATACTGTACAGAAGT
GCCGTGACCTCCTTGCCGTACGTACATAAGTAGTACGCAGCAGCCCGAGA
GTGATGCTGATACTGAATTATGATATGTTATACTGATGTTGACGCTGACG
TTGTTTTCCGCGATGCGACGTTGCATGCGTGCTTCGACCGACGGCTCTGC
CCATGTATCCAATCCCAATCGTATCCATCGATGGATATGCATCCATCTCA
GCCATGGACGACTTGGTGATCCGGCGCATGTTTGTGGTGCCGTCGTTCGA
GATCCACGGGGGGGTGTCGGGCCTCTTCGACCTCGGCCCCCCCGGTTGCG
GCCTCAAGGGAAACGTCGTGTCCCTCTGGAAGCAGCACTTCGTGCTCGCC
GAAGGCATGCTCGAGATGGAGTGCACCAACCTCACCCCCGAGAATGTGTT
GCAGACGTCCGGTACGTACGTAGATACCTACGCATCAGGTGTCGTATCTG
ATGCCGTGTGCTTGGGTTTGTTTGGATTTGTGCGCGCGTGGTACGGTGGG
CGCCTTCTTGCTCTATTTAGAAGTACAGGCATTGTCTTACCCCACTTGGT
GTGATGGTCTGTAGTACTCTGTCATTGTTCAGTTTACTTCACCTCTCTCT
TTCGTCGTCGTTGATCGTTGGTCACCGTTCTCCTGCTATCATACCGCATC
CGTGCTGGGTTGCGCTGCACACCTCGATCTCGATCCTGATCTCACCCCGT
TTGAAAATAAGTCAGGAAGTCAGAGAAAAAAATTCCCTCCCCACGTTAGA
GACGGTGCTCCGTGGTGAAATATCAGTGCAATACAGCAGTGATGTAGGTA
GTATTTGTCCCTTTTCTTCGTGTCTTGGCTTGTGTGCACTAACCTGGTGC
TGCGCTGCTGCCGCCATTGGTGGTACTGCGATGCGACCTGTCCATCCCAT
CGATCGATCGATCAATCGACGATTACAACGATACGATGGGACGACGACTG
TCGTGATCGACTGGGTGGACCGACCGATGGCCGACCGATGGATCGACTCA
CGCCCCTTTATTTGTTCAGGGCACGTGGAGAAGTTTACCGACCTGATGGT
GAAGGACACTGTCACCGGGGAGTCTCTCCGTGCCGACAAGCTGCTCGAGG
ACATCATCGACGACCTCCTCGCCAAGAACCCGGCAATGCCCACGGTACGA
TAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6596:7828..9430-

>mRNA_L-elsbetiae_contig6596.15303.1 ID=mRNA_L-elsbetiae_contig6596.15303.1|Name=mRNA_L-elsbetiae_contig6596.15303.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=912bp|location=Sequence derived from alignment at L-elsbetiae_contig6596:7828..9430- (Laminarionema elsbetiae ELsaHSoW15)
GGAGCGGCAGCGGACGCGATTAAGGCGGAGGTTGAGAAGCTGCAGAGCTT
CAAGGCTTCTCTGGCAGCTGCAACAGCGGCGGCAGGGTCCACAAGCACCT
TCGACCGGAAAGGGAGCGGCAGCGGACGCGATTAAGGCGGAGGTTGAGAA
GCTGCAGAGCTTCAAGGCTTCTCTGGCAGCTGCAACAGCGGCGGCAGGGT
CCACAAGCACCTTCGACCGGAAAGCCATGGACGACTTGGTGATCCGGCGC
ATGTTTGTGGTGCCGTCGTTCGAGATCCACGGGGGGGTGTCGGGCCTCTT
CGACCTCGGCCCCCCCGGTTGCGGCCTCAAGGGAAACGTCGTGTCCCTCT
GGAAGCAGCACTTCGTGCTCGCCGAAGGCATGCTCGAGATGGAGTGCACC
AACCTCACCCCCGAGAATGTGTTGCAGACGTCCGCCATGGACGACTTGGT
GATCCGGCGCATGTTTGTGGTGCCGTCGTTCGAGATCCACGGGGGGGTGT
CGGGCCTCTTCGACCTCGGCCCCCCCGGTTGCGGCCTCAAGGGAAACGTC
GTGTCCCTCTGGAAGCAGCACTTCGTGCTCGCCGAAGGCATGCTCGAGAT
GGAGTGCACCAACCTCACCCCCGAGAATGTGTTGCAGACGTCCGGGCACG
TGGAGAAGTTTACCGACCTGATGGTGAAGGACACTGTCACCGGGGAGTCT
CTCCGTGCCGACAAGCTGCTCGAGGACATCATCGACGACCTCCTCGCCAA
GAACCCGGCAATGCCCACGGTACGATAGGGCACGTGGAGAAGTTTACCGA
CCTGATGGTGAAGGACACTGTCACCGGGGAGTCTCTCCGTGCCGACAAGC
TGCTCGAGGACATCATCGACGACCTCCTCGCCAAGAACCCGGCAATGCCC
ACGGTACGATAG
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