prot_L-elsbetiae_contig6513.15207.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6513.15207.1
Unique Nameprot_L-elsbetiae_contig6513.15207.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length495
Homology
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BLAST of mRNA_L-elsbetiae_contig6513.15207.1 vs. uniprot
Match: A0A6H5JCA5_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCA5_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 1.100e-24
Identity = 202/605 (33.39%), Postives = 259/605 (42.81%), Query Frame = 0 
Query:   16 SQEDYLHRKRQMLIAQADVAVKRAVAAGARSP-AARAARAR--GLALDAPVARGRSPLVHERLEQQLEKGKNVLEERRRVR-DARKELDDLPLPGYYPFRSRRQ------SAGANVGXXXXXXXX------------------DANGEED-----KPRRRLLPVRRSDDDV--------------------AVPNQPPRIRRV-----PREVLDVPVDV---GD-----GDDGERAKRVW------GWGGVAG--GAAAAALA---GQPSQDPKMGRR--ARK----------------------EGLPKTEPDAAERRDPGGSGSPRIKNANRKPPASAPGSHADSG-----VDGDNGLADDWLELLQWPLRALGARPRRKSRXXXXXXXXXXXXXXXXXFGQKEGDGDEDVVVLENSYF------PRSKRKEPRRSG---------------------GDVSSDGLDLEPEVDD--------APSPAVVDGDGKSRAKRNRPVKRRSVADSHANLQDIPEPPPKRVRFG-GAGGVGVGPLAAPGFDDAYWQARDRAGGRSGVEDEWLALGRAAGRAGARAARRNKREQEEKEAAASVLDAVIA 478
            S E+YL+++RQMLIA+ADVA+KRA+A G + P AAR A+    GL  D P A  RSPLV ER+EQQLEKGK VLEERRRVR  +RK+L++  LPG  PF S++       S GA+ GXXXXXXXX                  DA+  E+       +++   V+R  D+                     AV   PP + R      P + LDV  +    GD     G DG             G GG+ G  G + AALA   GQP +  +MG    ARK                      E + ++E D   + D  G G+     AN    ASAP     +G     VD D GLA D + +L WP RA   RPR K                      K  DGD++ + +E          P  KRK     G                            L+   EV++        +P  A VD  GK+R K NR  K+RSVAD   +   I E  PKRV FG G   VG+G     G+                +  EW AL R AG         ++ EQEEKEAA +V DAV+A
Sbjct:  704 SHEEYLNKRRQMLIARADVAMKRAMAGGVKVPGAARGAKGARGGLPADPPAAHPRSPLVRERIEQQLEKGKAVLEERRRVRRKSRKDLNEWGLPGGVPFGSKQSNVAAGDSGGASAGXXXXXXXXXXXXXXXXXXXXXXXXXXDASVVENVQVAANQQQQGDSVQRRGDNAPFCKRDAGEIAGKPAARTAGAVLPPPPGVCRAVASSTPPQSLDVGQEELAQGDREAKGGGDGXXXXXXXXXMDASGRGGMVGRLGGSEAALAPAAGQPPEGSEMGADNCARKGASGRDVDPKVLKLATSRHGIFEAVAESESDEPRKLDCNGGGA----GANGGSAASAPDMRPAAGTDNDKVDDDEGLALDVVGILPWPERARSPRPRHKPAWL-----------------DKGDDGDDEALDMEEEEGVFVVTPPLGKRKREEAGGKGXXXXXXXXXXXXXXXXXXXXXXXXSSLEEVVEVEEKLKRKDGISPKIAAVDLGGKARMKVNR-EKKRSVADFVVDRGGIREASPKRVHFGAGDFSVGLGLARRVGYRP------------KSIGGEWGALERGAGF--------SRNEQEEKEAAGAVADAVMA 1266
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6513.15207.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JCA5_9PHAE1.100e-2433.39RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 72..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6513contigL-elsbetiae_contig6513:2918..4402 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6513.15207.1mRNA_L-elsbetiae_contig6513.15207.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6513 2902..4402 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6513.15207.1 ID=prot_L-elsbetiae_contig6513.15207.1|Name=mRNA_L-elsbetiae_contig6513.15207.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=495bp
MRRPSGVGGAQPNPASQEDYLHRKRQMLIAQADVAVKRAVAAGARSPAAR
AARARGLALDAPVARGRSPLVHERLEQQLEKGKNVLEERRRVRDARKELD
DLPLPGYYPFRSRRQSAGANVGAGAGVAAGDANGEEDKPRRRLLPVRRSD
DDVAVPNQPPRIRRVPREVLDVPVDVGDGDDGERAKRVWGWGGVAGGAAA
AALAGQPSQDPKMGRRARKEGLPKTEPDAAERRDPGGSGSPRIKNANRKP
PASAPGSHADSGVDGDNGLADDWLELLQWPLRALGARPRRKSRAAAAPAA
PAAAAAAAAAFGQKEGDGDEDVVVLENSYFPRSKRKEPRRSGGDVSSDGL
DLEPEVDDAPSPAVVDGDGKSRAKRNRPVKRRSVADSHANLQDIPEPPPK
RVRFGGAGGVGVGPLAAPGFDDAYWQARDRAGGRSGVEDEWLALGRAAGR
AGARAARRNKREQEEKEAAASVLDAVIANRARVRGARDARVAAVA
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