mRNA_L-elsbetiae_contig6505.15195.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6505.15195.1 vs. uniprot
Match: D7G4J2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4J2_ECTSI) HSP 1 Score: 78.6 bits (192), Expect = 8.480e-12 Identity = 37/72 (51.39%), Postives = 47/72 (65.28%), Query Frame = 1 Query: 4 VAGKNSRERNNRGRWTRQEHEQFLGGLEAVGEIWCLVATYVPTRTELQTRTHAQKYLRKIRQGLPFPEEPYQ 219 KN R +GRWT QEH FL GLE G+ W +A V TRT +QTRTH QKY +++++G FPEEPY+ Sbjct: 38 AVAKNRRTAMVKGRWTSQEHADFLVGLEKYGKDWKAIADVVKTRTTVQTRTHHQKYEKQVKRGRKFPEEPYE 109
BLAST of mRNA_L-elsbetiae_contig6505.15195.1 vs. uniprot
Match: A0A6H5JAU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU8_9PHAE) HSP 1 Score: 78.6 bits (192), Expect = 2.350e-11 Identity = 34/61 (55.74%), Postives = 44/61 (72.13%), Query Frame = 1 Query: 37 RGRWTRQEHEQFLGGLEAVGEIWCLVATYVPTRTELQTRTHAQKYLRKIRQGLPFPEEPYQ 219 +GRWT QEH FL GLE G+ W +A V TRT +QTRTH QKY +++++G FPEEPY+ Sbjct: 3 KGRWTSQEHADFLAGLEKYGKDWKAIADVVKTRTTVQTRTHHQKYDKQVKRGRKFPEEPYE 63
BLAST of mRNA_L-elsbetiae_contig6505.15195.1 vs. uniprot
Match: A0A6H5JBL6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL6_9PHAE) HSP 1 Score: 68.6 bits (166), Expect = 2.800e-10 Identity = 37/71 (52.11%), Postives = 46/71 (64.79%), Query Frame = 1 Query: 34 NRGRWTRQEHEQFL---GGLEAVGEIWCLVA-TYVPTRTELQTRTHAQKYLRKIRQGLPFPEEPYQSAVES 234 N+GRWT+ EHE+FL G L E W ++ V TR+ Q RTHAQKY RKI QGLPFP+E +S V + Sbjct: 50 NKGRWTKDEHERFLCVAGQLGKNKESWKWISQVVVTTRSPAQVRTHAQKYFRKIGQGLPFPDEVRKSYVRT 120
BLAST of mRNA_L-elsbetiae_contig6505.15195.1 vs. uniprot
Match: D7FXQ4_ECTSI (HTH myb-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXQ4_ECTSI) HSP 1 Score: 72.4 bits (176), Expect = 6.200e-10 Identity = 36/69 (52.17%), Postives = 45/69 (65.22%), Query Frame = 1 Query: 28 RNNRGRWTRQEHEQFLGGLEAVGEIWC-LVATYVPTRTELQTRTHAQKYLRKIRQGLPFPEEPYQSAVE 231 R N+GRWT +EH +FL G+E VA+ +PTRT LQ RTHAQKY K+ +G PFP EPY S + Sbjct: 4 RRNKGRWTHEEHAEFLRGVELFKRSDLEAVASMLPTRTILQVRTHAQKYFDKVDKGEPFPNEPYPSQYD 72
BLAST of mRNA_L-elsbetiae_contig6505.15195.1 vs. uniprot
Match: A0A7S1C6P3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C6P3_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 6.930e-10 Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 1 Query: 34 NRGRWTRQEHEQFLGGLEAVGEIWCLVATYVPTRTELQTRTHAQKYLRKI--RQGL 195 N GRWTR EHE+F+ GLE G W VA+ +P+RT +Q RTHAQKY +K+ QGL Sbjct: 19 NTGRWTRDEHERFVKGLELYGREWKKVASMIPSRTVVQIRTHAQKYFQKLAKEQGL 74
BLAST of mRNA_L-elsbetiae_contig6505.15195.1 vs. uniprot
Match: D8LU58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU58_ECTSI) HSP 1 Score: 67.8 bits (164), Expect = 1.510e-9 Identity = 44/96 (45.83%), Postives = 55/96 (57.29%), Query Frame = 1 Query: 34 NRGRWTRQEHEQFLGGLEAVG---EIWCLVA-TYVPTRTELQTRTHAQKYLRKIRQGLPFPEEPYQ---------SAVESDDGAGAR-----LDGG 267 N+GRWT+ EHE+FL +G E W ++ V TR+ Q RTHAQKY RKI QGLPFP+E Q +AV ++ AGA LDGG Sbjct: 27 NKGRWTKDEHERFLSVAGQLGKNKESWRWISQVVVTTRSPAQVRTHAQKYFRKIGQGLPFPDEGGQDTSLDPHVAAAVAAETAAGAAALGHDLDGG 122
BLAST of mRNA_L-elsbetiae_contig6505.15195.1 vs. uniprot
Match: G4ZZP8_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZZP8_PHYSP) HSP 1 Score: 61.2 bits (147), Expect = 2.600e-8 Identity = 27/47 (57.45%), Postives = 36/47 (76.60%), Query Frame = 1 Query: 40 GRWTRQEHEQFLGGLEAVGEIWCLVATYVPTRTELQTRTHAQKYLRK 180 GRWT++EHE FL GL+ G+ W +++ V TRT +Q RTHAQKYL+K Sbjct: 19 GRWTKREHELFLEGLQRFGKSWKKISSLVHTRTLVQIRTHAQKYLQK 65
BLAST of mRNA_L-elsbetiae_contig6505.15195.1 vs. uniprot
Match: A0A1V9ZGA4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGA4_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 4.420e-8 Identity = 30/54 (55.56%), Postives = 37/54 (68.52%), Query Frame = 1 Query: 40 GRWTRQEHEQFLGGLEAVGEIWCLVATYVPTRTELQTRTHAQKYLRKIRQGLPF 201 GRWT++EHE FL GL G+ W +A V TRT +Q RTHAQKYL+K + PF Sbjct: 81 GRWTKKEHELFLEGLRRYGKSWKHIANLVVTRTLVQIRTHAQKYLQKQNKSKPF 134
BLAST of mRNA_L-elsbetiae_contig6505.15195.1 vs. uniprot
Match: A0A7S3PLT1_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PLT1_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 1.840e-7 Identity = 27/50 (54.00%), Postives = 35/50 (70.00%), Query Frame = 1 Query: 34 NRGRWTRQEHEQFLGGLEAVGEIWCLVATYVPTRTELQTRTHAQKYLRKI 183 N GRWTR+EH FL GLE G+ W +A + TR+ +Q RTHAQKY +K+ Sbjct: 25 NTGRWTREEHNMFLHGLETYGKEWKKIADLIKTRSVVQIRTHAQKYFQKV 74
BLAST of mRNA_L-elsbetiae_contig6505.15195.1 vs. uniprot
Match: D8M186_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M186_BLAHO) HSP 1 Score: 60.5 bits (145), Expect = 1.900e-7 Identity = 27/49 (55.10%), Postives = 34/49 (69.39%), Query Frame = 1 Query: 34 NRGRWTRQEHEQFLGGLEAVGEIWCLVATYVPTRTELQTRTHAQKYLRK 180 N+G+WT EH++FL GL G+ W + VP+RT LQ RTHAQKYL K Sbjct: 16 NKGKWTESEHKEFLKGLSLYGKNWKRIHQLVPSRTLLQIRTHAQKYLSK 64 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6505.15195.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6505.15195.1 >prot_L-elsbetiae_contig6505.15195.1 ID=prot_L-elsbetiae_contig6505.15195.1|Name=mRNA_L-elsbetiae_contig6505.15195.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=266bp MVAGKNSRERNNRGRWTRQEHEQFLGGLEAVGEIWCLVATYVPTRTELQTback to top mRNA from alignment at L-elsbetiae_contig6505:4684..7836- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6505.15195.1 ID=mRNA_L-elsbetiae_contig6505.15195.1|Name=mRNA_L-elsbetiae_contig6505.15195.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3153bp|location=Sequence derived from alignment at L-elsbetiae_contig6505:4684..7836- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6505:4684..7836- >mRNA_L-elsbetiae_contig6505.15195.1 ID=mRNA_L-elsbetiae_contig6505.15195.1|Name=mRNA_L-elsbetiae_contig6505.15195.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1596bp|location=Sequence derived from alignment at L-elsbetiae_contig6505:4684..7836- (Laminarionema elsbetiae ELsaHSoW15)back to top |