prot_L-elsbetiae_contig646.15135.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig646.15135.1
Unique Nameprot_L-elsbetiae_contig646.15135.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length429
Homology
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BLAST of mRNA_L-elsbetiae_contig646.15135.1 vs. uniprot
Match: D7FJV3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV3_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 6.030e-39
Identity = 138/398 (34.67%), Postives = 165/398 (41.46%), Query Frame = 0 
Query:   39 MCTAGAVTSSGSDGKTLLHCAAMSGQTNVIAELLAAGANPYARCSSGETPLDLAGR-NGHNDALSCLLCHSPPAATPPAVGGTQAVPTASCTSATSPQGPMVIPAAVTATPKSPGKGGLSLFRNKSWLRKSPKGADGTAVKATKKGRGKRPGITARGDGDGGGTPQSVAGTSDGGIDVGGGWIMYTDSDGFQYCWNEALQESRWVDESANLPGPGPSPVAFGTAPQQP-WSGISTAEIY--TNPLAGPVHSPGWPSPRGARDGFMQLPSPGESMERHGWTATGPVAIAMPPTPPEMLSRSAGRDGPGGWQPQAHASGEAVGVAWLGVAETT---TAPANEAGGAAVAAAGDSGPLGXXXXXXXXVANTAFYGQDHPPSPATKGKLWAERVKAGDRPPL 429
            M  AGAVT++GSDGKTLLHCAAMSGQT+VIAELLAAGANP+ARCSSGETPLDLAGR   HN  L                                              P +PG+                                                    +G+S+         I++ DS                 D         PS V  G     P W+  + A IY   N  AGPVHSPGWPSPRGA  GFMQ+PSP      H                      +           ++H   +A GVAWLGVA+TT   T    +AGG AVA    +            VAN+AFYGQ++ PSPATKG+LWAER++AG   PL
Sbjct:    1 MSVAGAVTNAGSDGKTLLHCAAMSGQTSVIAELLAAGANPHARCSSGETPLDLAGRWLDHNANL----------------------------------------------PAAPGQS---------------------------------------------------SGSSE---------IVFEDSPAPIVGGXXXXXXXXXGD---------PSLVYQGAPTDHPAWNEQAIAAIYHKNNTPAGPVHSPGWPSPRGAGGGFMQVPSPATPTNVHAXXXXXXXXXXXXXXXXXXXXXAPPL--------RSHVKEDAAGVAWLGVAQTTAGGTTVEGQAGGEAVAGGAATA-----------VANSAFYGQENSPSPATKGRLWAERIEAGRNQPL 264
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BLAST of mRNA_L-elsbetiae_contig646.15135.1 vs. uniprot
Match: UPI0019819A17 (ankyrin repeat domain-containing protein n=2 Tax=Niveibacterium TaxID=1769726 RepID=UPI0019819A17)

HSP 1 Score: 60.1 bits (144), Expect = 8.400e-7
Identity = 39/96 (40.62%), Postives = 54/96 (56.25%), Query Frame = 0 
Query:   19 LENARLAAKHGDVAYIQSYIMCTAGAVTSSGSDGKTLLHCAAMSGQTNVIAELLAAGANPYARCSSGETPLDLAGRNGHNDALSCLLCHSPPAATP 114
            L+ AR  A+ G V+ ++ Y+    GAV +    G TLL  AA +GQT V+A LLA GANP  R  +GE+ + LA  NGH D +   +  + P   P
Sbjct:   22 LDAARTGAEMGRVSVVRDYLD-EGGAVDALDFRGSTLLIQAARTGQTEVVALLLARGANPAVRSGAGESAISLAAMNGHLDTVEAFITANAPLEVP 116
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig646.15135.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJV3_ECTSI6.030e-3934.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI0019819A178.400e-740.63ankyrin repeat domain-containing protein n=2 Tax=N... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 84..116
e-value: 84.0
score: 12.0
coord: 51..80
e-value: 1.0E-4
score: 31.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 51..83
score: 10.927
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 23..130
e-value: 8.3E-17
score: 63.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 24..108
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 25..107
e-value: 1.2E-8
score: 35.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 24..105
score: 17.396
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 23..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig646contigL-elsbetiae_contig646:10387..14464 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig646.15135.1mRNA_L-elsbetiae_contig646.15135.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig646 10365..14464 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig646.15135.1 ID=prot_L-elsbetiae_contig646.15135.1|Name=mRNA_L-elsbetiae_contig646.15135.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=429bp
MADKGTPEHGQGAGASILLENARLAAKHGDVAYIQSYIMCTAGAVTSSGS
DGKTLLHCAAMSGQTNVIAELLAAGANPYARCSSGETPLDLAGRNGHNDA
LSCLLCHSPPAATPPAVGGTQAVPTASCTSATSPQGPMVIPAAVTATPKS
PGKGGLSLFRNKSWLRKSPKGADGTAVKATKKGRGKRPGITARGDGDGGG
TPQSVAGTSDGGIDVGGGWIMYTDSDGFQYCWNEALQESRWVDESANLPG
PGPSPVAFGTAPQQPWSGISTAEIYTNPLAGPVHSPGWPSPRGARDGFMQ
LPSPGESMERHGWTATGPVAIAMPPTPPEMLSRSAGRDGPGGWQPQAHAS
GEAVGVAWLGVAETTTAPANEAGGAAVAAAGDSGPLGAGGAAAAAVANTA
FYGQDHPPSPATKGKLWAERVKAGDRPPL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom