prot_L-elsbetiae_contig6453.15125.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6453.15125.1
Unique Nameprot_L-elsbetiae_contig6453.15125.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length97
Homology
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BLAST of mRNA_L-elsbetiae_contig6453.15125.1 vs. uniprot
Match: D7FHQ5_ECTSI (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHQ5_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 8.890e-23
Identity = 61/99 (61.62%), Postives = 70/99 (70.71%), Query Frame = 0 
Query:    4 LDPVDNDAAARRRSSVMKLPDNLRALVQQSDASGVQQKTPQPYSPQAGS--KAPTTPATGTSS---LNNTGGSTASASGPNK--WMAHVLAFIRWKRLP 95
            +DP D DA ARRRSSVMKLPDNLRALVQQSDASGVQ+KT  PY+PQ  S  KA TT    T     LNNTG STAS        W+++V+ FIRWK++P
Sbjct:  156 VDPADADAVARRRSSVMKLPDNLRALVQQSDASGVQKKTESPYNPQGASDDKAQTTTTDNTXXXXXLNNTGSSTASTGSTRGRGWLSNVMTFIRWKKVP 254
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6453.15125.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHQ5_ECTSI8.890e-2361.62FCP1 homology domain-containing protein n=1 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6453contigL-elsbetiae_contig6453:1524..3658 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6453.15125.1mRNA_L-elsbetiae_contig6453.15125.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6453 1524..3660 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6453.15125.1 ID=prot_L-elsbetiae_contig6453.15125.1|Name=mRNA_L-elsbetiae_contig6453.15125.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=97bp
VPKLDPVDNDAAARRRSSVMKLPDNLRALVQQSDASGVQQKTPQPYSPQA
GSKAPTTPATGTSSLNNTGGSTASASGPNKWMAHVLAFIRWKRLPRR
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