prot_L-elsbetiae_contig6407.15084.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6407.15084.1
Unique Nameprot_L-elsbetiae_contig6407.15084.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length461
Homology
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BLAST of mRNA_L-elsbetiae_contig6407.15084.1 vs. uniprot
Match: A0A6H5JAH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAH0_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 2.490e-12
Identity = 69/144 (47.92%), Postives = 86/144 (59.72%), Query Frame = 0 
Query:  324 LSREPSLSSSGSSSTEELLAEADSLIAD-------SEKASARRTPGRSRRARAT--------AGRSRARFDSTGEPDLTTTSGKKTPSPSRPSDNHRRKRARVYREVSGAEVDALVRLTNRALQRDPAALIEIAEDPSIQKSGE 452
            +SR  SL S   SSTE++LAEAD LIAD       S +A    T  R+ + RAT        A R +++    G P L  T  + T S SR SD    KR RVY EVSG EVDALV LT+RAL+RDP+AL EIA+D S+Q+ G+
Sbjct:  339 MSRGQSLLSE--SSTEDILAEADHLIADAANNTFNSIRAMTTPTKPRAGKLRATSKATGPIQAARRKSKDSPRGTPSLKLTLSRMT-SASRSSDTRSPKRPRVYPEVSGEEVDALVSLTHRALERDPSALSEIAKDASLQQGGD 479
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BLAST of mRNA_L-elsbetiae_contig6407.15084.1 vs. uniprot
Match: D8LIF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIF2_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 1.720e-10
Identity = 36/55 (65.45%), Postives = 42/55 (76.36%), Query Frame = 0 
Query:  398 SRPSDNHRRKRARVYREVSGAEVDALVRLTNRALQRDPAALIEIAEDPSIQKSGE 452
            SR SD    KR RVY EVSG EVDALV LT RAL+RDP+AL EIA+D S+Q+ G+
Sbjct:    5 SRSSDTRSPKRPRVYPEVSGEEVDALVSLTQRALERDPSALSEIAKDASLQQGGD 59
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6407.15084.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JAH0_9PHAE2.490e-1247.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIF2_ECTSI1.720e-1065.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 138..460
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..119
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 120..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6407contigL-elsbetiae_contig6407:5951..8869 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6407.15084.1mRNA_L-elsbetiae_contig6407.15084.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6407 5593..9447 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6407.15084.1 ID=prot_L-elsbetiae_contig6407.15084.1|Name=mRNA_L-elsbetiae_contig6407.15084.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=461bp
MPCMMGQEGAFVERSYSLQQFIRWGLGSYPSSAAAATTKANTVEQGGWNK
AGRFWANMRRGSLGCITTTWEEEQLRVASGDCGAVQGRLKAGPTSSCDED
PTMGATNSAATLFLFRGRTAATLLVGALVAAAIYSVYSSRCKPSRPRPRP
QRDDDNDGGRVENGEETGVGDKAGADEDKTPERTGARGGGGGGGGGDGDV
GGGGNGGEEYSGHEAGDRAEGGEGECPPTSSGSVDPARNSSPSPENDRER
AGSVEDAEDRQGENGVPASKGGDNSQGARGVSAAGAGGDQRGDASARIGG
KEDQKRDEARAGGSPNRDQNGSALSREPSLSSSGSSSTEELLAEADSLIA
DSEKASARRTPGRSRRARATAGRSRARFDSTGEPDLTTTSGKKTPSPSRP
SDNHRRKRARVYREVSGAEVDALVRLTNRALQRDPAALIEIAEDPSIQKS
GEDELSPLKY*
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