prot_L-elsbetiae_contig6362.15024.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6362.15024.1
Unique Nameprot_L-elsbetiae_contig6362.15024.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length433
Homology
BLAST of mRNA_L-elsbetiae_contig6362.15024.1 vs. uniprot
Match: D8LM71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM71_ECTSI)

HSP 1 Score: 291 bits (745), Expect = 1.990e-90
Identity = 231/472 (48.94%), Postives = 284/472 (60.17%), Query Frame = 0
Query:    4 QNEQLSKKLAARPVMAPGLERTLLEAHLRLLLGKLGVTSGAGLGKGGLAATAPGSGGVS----------GGEQPHTFRDSHLGRGKPGSTRVCCAPAEGCP-KDASPRRK--HGLSSAVRQSSGSSSGSNNSAPNTPCIPLDTHQDRAVFEFISAGGDSSS---------------------SEVVSVRDGGSRPETGRRPGSSRSARSAPECLESGKCLSIATIDTALGELRAAFEEEAQGLLEEVADLTDLLEDEAVRKADGERRTRRNL-PSACDNDVRGNNTNISSSCGGGGSGGPIPSSELRRFGKKLEEAVRSREHAAEVTQRLAKTDKKLLPRNSKRVSVISSSLRSTG-GAVIGGKEGVRSK--GWAAPPVRGGGAYADEIDGKGYR--SGRNR-PSL--KSASGCLRGRAGSDDMAAAAAAAMRQATRQSGGRGRERGVLASKLRGAVRSSRDQ-AVDDEKFW 431
            QN+Q  +K+AARP MAPGLERTLLEAHLRLLLGKLGV SG   GKGGLA+ +P S              G  +PHTFR+  L R    STR CCA   G P +D+SPRRK  +G  ++  +          S P TP +PL+T QDRAV+EF+S  G+                        SE  +V +  SRP TGRRPGSSRSARSAPECLESG+C+++ATIDTALGELRAAFEEEAQ LLEEVADLT LLEDEA  KAD ER++RR+L P A D    G  +N +++     +  PIPSSELRR+GKKLEEAVRSREHAA+V QRLA      LPR            R+ G     GGK+G +    G    PV      ++++ G   R  S R+R P +  K++ G   G  GS       A    +A  + GG G ERG LA+KLRGAVR+SR++  VDD+K+W
Sbjct:   41 QNKQTWQKIAARPTMAPGLERTLLEAHLRLLLGKLGVPSGNQGGKGGLASMSPSSXXXXXXXXXXXXXVGRPRPHTFREDDLCRRS--STRPCCATTAGSPGEDSSPRRKCLNGRKASYARXXXXXXXXC-SEPTTPYVPLETQQDRAVYEFLSTSGECDGLSGGAAGRGGNGTHGEAERGGSEGAAVGNSRSRPGTGRRPGSSRSARSAPECLESGRCVTVATIDTALGELRAAFEEEAQNLLEEVADLTGLLEDEAAVKADDERQSRRHLGPKAGD---YGGKSNAAAAA----ANDPIPSSELRRYGKKLEEAVRSREHAADVAQRLA------LPRQ-----------RAPGLEPGCGGKDGKKKGRGGMTVAPVSRSSRSSEDLPGSTARLESSRHRGPGVGRKASIGRGSGSIGSGPSVEDKARGEDKAVGRRGGGG-ERGALATKLRGAVRASREEEVVDDDKYW 484          
BLAST of mRNA_L-elsbetiae_contig6362.15024.1 vs. uniprot
Match: A0A6H5KD29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD29_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 5.550e-22
Identity = 101/229 (44.10%), Postives = 126/229 (55.02%), Query Frame = 0
Query:  210 QGLLEEVADLTDLLEDEAVRKADGERRTRRNL-PSACDNDVRGNNTNISSSCGGGGSGGPIPSSELRRFGKKLEEAVRSREHAAEVTQRLAKTDKKLLPRNSKRVSVISSSLRSTGGAVIGGKEGVRSKGWAAPPVRGGGAYADEIDGKGYR--SGRNRP---SLKSASGCLRGRAGSDDMAAAAAAAMRQATRQSGGRGRERGVLASKLRGAVRSSRDQAV-DDEKFW 431
            + LLEEVADLT LLEDEA  KAD ERR+RR+L P   D+   G  +N +++         IPSSELRR+GKKLEEAVRSREHAA V QRLA      LPR        +  L +  G   G K+G    G    PV      + ++ G   R  S R+R      K++ G   G  GS       A    +A  + GG G ERG LA+KLRG VR+SR++ V DD+KFW
Sbjct:   57 KNLLEEVADLTGLLEDEAAVKADDERRSRRHLGPKVGDS---GGTSNAAAN-------DSIPSSELRRYGKKLEEAVRSREHAAGVAQRLA------LPRQR------APGLETGCGGKDGRKKG--RGGTTVAPVSRSSRCSQDLPGSAVRLQSSRHRGPGGGRKASIGRGSGSIGSGPSVEDKAPGEDKAVGRRGGGG-ERGALATKLRGTVRASREEEVADDDKFW 260          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6362.15024.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LM71_ECTSI1.990e-9048.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KD29_9PHAE5.550e-2244.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 202..222
IPR031367Coiled-coil domain-containing protein 24PFAMPF15669CCDC24coord: 2..231
e-value: 1.5E-11
score: 44.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6362contigL-elsbetiae_contig6362:2665..5113 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6362.15024.1mRNA_L-elsbetiae_contig6362.15024.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6362 2665..5113 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6362.15024.1 ID=prot_L-elsbetiae_contig6362.15024.1|Name=mRNA_L-elsbetiae_contig6362.15024.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=433bp
MQEQNEQLSKKLAARPVMAPGLERTLLEAHLRLLLGKLGVTSGAGLGKGG
LAATAPGSGGVSGGEQPHTFRDSHLGRGKPGSTRVCCAPAEGCPKDASPR
RKHGLSSAVRQSSGSSSGSNNSAPNTPCIPLDTHQDRAVFEFISAGGDSS
SSEVVSVRDGGSRPETGRRPGSSRSARSAPECLESGKCLSIATIDTALGE
LRAAFEEEAQGLLEEVADLTDLLEDEAVRKADGERRTRRNLPSACDNDVR
GNNTNISSSCGGGGSGGPIPSSELRRFGKKLEEAVRSREHAAEVTQRLAK
TDKKLLPRNSKRVSVISSSLRSTGGAVIGGKEGVRSKGWAAPPVRGGGAY
ADEIDGKGYRSGRNRPSLKSASGCLRGRAGSDDMAAAAAAAMRQATRQSG
GRGRERGVLASKLRGAVRSSRDQAVDDEKFWN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031367CCDC24