mRNA_L-elsbetiae_contig632.14962.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig632.14962.1 vs. uniprot
Match: D7FWR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR7_ECTSI) HSP 1 Score: 590 bits (1522), Expect = 1.590e-188 Identity = 492/1139 (43.20%), Postives = 613/1139 (53.82%), Query Frame = 1 Query: 1 PHA---NNSWSNIVQDFTEQKRIRPVSAPSPR-RELSARESITIDDNXXXXXXXXXXRCNRNIRAASAQARLADVATRKDEPMQVFKRSAKIQAVVGILQGSQVVRLRGKPKKGERRKAAEAAMRAELA----VSDHQSNKHHPTRSSSRPSLSAIPS-AAGSNRHRIXXXXXXXXXXXXNPGP-----HRRKPSS-PKA--------RSVRPRTAPANAYSPLSEGKRPQSADSGIKYRTPNLFSNST--TNDDRKLGMTRPRSRIYSFGATATAGAALDGGYGGHQDAMLRATALDAERRDH----AHHSSSTPYGNATATMSKRASEGEEGDKKEREA---SLTG-YPDATGQSAKANAQTAGAEENDARTGNSTHLGAIDISKVRNVGKHPAPLKKAEPVSAEESSRRLFTQVSSHGMVHCYNRATENQRSGLDRDLESIGSGARAADGGKAGIAAALGSDMLSSRGSSGSENNEAVSP---------------------------------------------RPETSASGESSTKSESGGTGEDGSAEGGQGFDSDENQTGKEATGIERQNSRTDNIVLGGPVRHATPRADCLRGRYARATTKSKSAFAAKRXXXXXXXXXXXXXPAGPHAP--TSSVLAVSAGGSRHRTGYSEGGSCAQSVSSSDEGGRGGARGGRKAAR-VVPWGEKLAAVRRRRAALERSMRDEAKILVESRAKKEARVSCKTSVLVSVSVRGARGFLGLKGGP-RNIKKTEK---------------AKPPSVRVVRAATTIQRAFRHTRQNELWLGEQFDRDYVAQ---KDLEGRGDEHCGPNPSEG-----RLRPMPSGGVDLFSSIASSTTRADEGGTTYRTKKLHLRHGAVRTKRMVRGFICCTQARILLLQLLWDRTEGNILGERRNKRAAVESRAAATIQQLTHIRRIAVGLIKMQSSAQSFKMEQQSRQAKRNPPTAER----RQGGRTNGSGGGGCTFETAKQARSEKQECEAILRASSEHGRRGRRLVDVSVRDRVLRDMLYSYRRQHIIRDQTEYFMETSRPPFVDTRDIKRMLACPAEEMHKFSDPKNYRTRPRYTRLALPLREIEGAIQDTIASHVKSEYRDKLKETLGTPDSRLCG 3090 PHA SWSNI Q FTE+KRIRP SAP+ + +E + S+ + RA +A+ARL D TR+D PM F+R+ +IQ VV +LQ + + RLRG+PKKGER+KAAEAA RA A V D +S+ H P +S R S A S AG++R R P P HR P+ P A RP+TA A S S+ KR + D G +P L + + T+ D KLGMTR +RIYSFGA+ G GGH++ MLRATA+DA RR + S P A +R + GE+ + +++ S G Y G+ A+ + ++ T +S HLG +DISK + L SR+L T V SH V Y RAT + S + G G GG A ++A GS +L+ + N+ SP R SG S T++E+ G + G G T + + ++ P A P+ DCLRGRYARA KSKSA+A K+ P P +S + G R+G + D GGRG AR W ++ AAV+RRRA L+ R EA V++RAK EARV SV SVSVRGA+ F L GG N TEK P S R V+AA T+QRAFR T Q E WLG+Q DRDY++Q +D +G+ DE P PS + P +GG D S + T R+DE +R KKLH RH +R KRMVRGFICCTQAR LLLQLLWDRTEGNILGERR+KRAAVESRAA+T+QQL+HIR++AVGLIK+Q+SA++FK+EQQ+RQAKRNP + + GGR G GGGG F+TAKQARSEK ECEAILR EHGRRGRRLVD++VRDR LRD+LYS+RRQHIIRDQ EY METSRPP VD+RD+KRML CPAEEMH FSDP NYRTRPRYTRLALP REI G IQDTIAS+V+SEYRDKLKE LG D+R G Sbjct: 24 PHAVQKTRSWSNIAQAFTEKKRIRPASAPAIKHKEHQTQPSVDSGSSRG--------------RAETARARLTDGTTRRDGPMS-FQRAEEIQEVVDVLQHTMMARLRGRPKKGERKKAAEAAKRAGSAPGTSVVDRRSHGHAPRVASPRGSAPATSSRGAGADRRRAASGASGEQRRR-RPRPSTAWNHRELPARCPPAIPTGMEHGLKARPKTAAVIASS-FSKSKRSLAEDLGPLRWSPGLIGDESHKTDTDGKLGMTR--ARIYSFGASTQGG-------GGHEEDMLRATAIDAARRSRLPRRCSSAGSAPRDLRPAVPGRRET-GEDSVRDDKDGGGGSAAGXYGGVKGRYGNASCRAGADSVHEDSTDSSEHLGVVDISKGDD-------LSWLLMFFLSPFSRQLTT-VLSHAEVSGYIRATGGKHSSFTSGSKLKGGG-----GGVASMSAIRGSPLLADGIA-----NKGTSPAALLDNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEQRESADRSG-SDTRTETRGRSDRGREVG---------------TRTVAGTAENEGVM---PTGSAPPQLDCLRGRYARADCKSKSAYAIKKAAAATAVGAAGASTTAPQTPHVLTSATRCNKRGLFDRSG------------ARDRGGRGXXXXXXXXARDPASWRDRFAAVQRRRAVLDDLRRTEATRQVKARAKAEARVPNNASVAASVSVRGAKRFTTLDGGAGNNGNATEKNXXXXXXXXXSNKSAPNPASYRTVQAAVTVQRAFRSTLQYEAWLGDQSDRDYLSQVTLRDGDGKRDE---PEPSHHQSSALKRSPSSAGGADSIISRLN-TVRSDEWAA-HRAKKLHDRHVTIRLKRMVRGFICCTQARFLLLQLLWDRTEGNILGERRSKRAAVESRAASTVQQLSHIRKLAVGLIKIQNSAEAFKLEQQARQAKRNPKKTAKPSGDKHGGRHQG-GGGGRVFDTAKQARSEKAECEAILR---EHGRRGRRLVDIAVRDRFLRDLLYSHRRQHIIRDQREYLMETSRPPLVDSRDVKRMLECPAEEMHMFSDPMNYRTRPRYTRLALPFREIGGIIQDTIASNVRSEYRDKLKEALGPTDARESG 1077 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig632.14962.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig632.14962.1 >prot_L-elsbetiae_contig632.14962.1 ID=prot_L-elsbetiae_contig632.14962.1|Name=mRNA_L-elsbetiae_contig632.14962.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1097bp PHANNSWSNIVQDFTEQKRIRPVSAPSPRRELSARESITIDDNNNNNNNNback to top mRNA from alignment at L-elsbetiae_contig632:603..9851+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig632.14962.1 ID=mRNA_L-elsbetiae_contig632.14962.1|Name=mRNA_L-elsbetiae_contig632.14962.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9249bp|location=Sequence derived from alignment at L-elsbetiae_contig632:603..9851+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig632:603..9851+ >mRNA_L-elsbetiae_contig632.14962.1 ID=mRNA_L-elsbetiae_contig632.14962.1|Name=mRNA_L-elsbetiae_contig632.14962.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=6582bp|location=Sequence derived from alignment at L-elsbetiae_contig632:603..9851+ (Laminarionema elsbetiae ELsaHSoW15)back to top |