mRNA_L-elsbetiae_contig6315.14956.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6315.14956.1 vs. uniprot
Match: D7FT95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT95_ECTSI) HSP 1 Score: 134 bits (337), Expect = 1.320e-31 Identity = 74/135 (54.81%), Postives = 91/135 (67.41%), Query Frame = 3 Query: 3 GPSRCLDAFIIALNQASDGRKRECRSWYTSAKELQLASLEFCTACRSVPTLHVKIEKGTPIRLWIH-APAQETCSAKRTSSTRVPVVRARAVTWKLSDSELRSM-GDAFSKVKRFTFDTNFNGDVC-GVKWPREL 398 GPSRCLDA IIALNQAS G WYTS +LQLASLE C +CRS+ L + ++ GTP RLW A +ET S KR + TRVPVVRAR VTWKL LR+M GDA+S+V F+ F+ D+ G++WP +L Sbjct: 8 GPSRCLDALIIALNQASGGE------WYTSTMQLQLASLELCASCRSMHLLKLNVQHGTPTRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLPGLALRNMTGDAWSEVTTFSLGPGFDDDLPRGIQWPEKL 136
BLAST of mRNA_L-elsbetiae_contig6315.14956.1 vs. uniprot
Match: A0A6H5JA08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA08_9PHAE) HSP 1 Score: 133 bits (334), Expect = 7.520e-30 Identity = 74/135 (54.81%), Postives = 90/135 (66.67%), Query Frame = 3 Query: 3 GPSRCLDAFIIALNQASDGRKRECRSWYTSAKELQLASLEFCTACRSVPTLHVKIEKGTPIRLWIH-APAQETCSAKRTSSTRVPVVRARAVTWKLSDSELRSM-GDAFSKVKRFTFDTNFNGDVC-GVKWPREL 398 GPSRCLDA IIALNQAS G WYTS +LQL SLE C ACRS+ L + ++ GTP RLW A +ET S KR + TRVPVVRAR VTWKL LR+M GDA+S+V F+ F+ D+ G++WP +L Sbjct: 39 GPSRCLDALIIALNQASGGE------WYTSTMQLQLTSLELCAACRSMHLLKLNVQHGTPPRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLPGVALRNMTGDAWSEVTTFSLGPGFDDDLPRGIQWPEKL 167
BLAST of mRNA_L-elsbetiae_contig6315.14956.1 vs. uniprot
Match: A0A6H5JFC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC0_9PHAE) HSP 1 Score: 111 bits (278), Expect = 1.960e-23 Identity = 60/134 (44.78%), Postives = 76/134 (56.72%), Query Frame = 3 Query: 3 GPSRCLDAFIIALNQASDGRKRECRSWYTSAKELQLASLEFCTACRSVPTLHVKIEKGTPIRLWIHAPAQETC------SAKRTSSTRVPVVRARAVTWKLSDSELRSMGDAFSKVKRFTFDTNFNGDVCGVKW 386 GPSRCLDAF +ALNQA DG WY S ++LQL+SL FC ACRSVPT+H+K+++ TP RL+ S+KR + RVP +RAR VTW+LS R G S V+ F N + W Sbjct: 26 GPSRCLDAFKVALNQACDGG-----GWYVSTEQLQLSSLPFCVACRSVPTMHLKVDRSTPARLFSGDDDAAAVRDKGHGSSKRVMAARVPALRARKVTWQLSGETPRCTGVGLSSVELFVLGDAVNDSMDEAVW 154
BLAST of mRNA_L-elsbetiae_contig6315.14956.1 vs. uniprot
Match: D7FXS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXS2_ECTSI) HSP 1 Score: 106 bits (264), Expect = 1.640e-22 Identity = 63/135 (46.67%), Postives = 76/135 (56.30%), Query Frame = 3 Query: 3 GPSRCLDAFIIALNQASDGRKRECRSWYTSAKELQLASLEFCTACRSVPTLHVKIEKG-TPIRLWI-HAPAQETCSAKRTSSTRVPVVRARAVTWKLSDSELRSMGDAFSKVKRFTFDTNFNGDVCGVKWPRELK 401 GP RCL+AF +ALN + DG WYTS KELQLASL+FC CR VP+LH+ + P RLW HA + AKR S+T VPV R R VTW L + F+KV+RF + D V WP LK Sbjct: 3 GPGRCLEAFAVALNTSCDGNV-----WYTSTKELQLASLQFCVKCRKVPSLHLAVNNAHVPARLWNDHAATEARTGAKRPSTTPVPVFRPREVTWGRPAWLLSDICLVFAKVERFLVRQDTVVD--DVVWPCRLK 130
BLAST of mRNA_L-elsbetiae_contig6315.14956.1 vs. uniprot
Match: D7FH81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH81_ECTSI) HSP 1 Score: 99.8 bits (247), Expect = 3.340e-20 Identity = 58/130 (44.62%), Postives = 75/130 (57.69%), Query Frame = 3 Query: 15 CLDAFIIALNQASDGRKRECRSWYTSAKELQLASLEFCTACRSVPTLHVKIEKGTPIRLWIHAPAQETCSAKRTSSTRVPVVRARAVTWKL-SDSELRSMGDAFSKVKRFTFDTNFNGDVCGVKWPRELK 401 CL + I+ALN+ DG SWYTS KELQ ASLEFC ACR+ P +H+K++ P L A A KR TRVP +RAR+VTW + + +EL + A + V F F+G + V WPR LK Sbjct: 14 CLSSLIVALNETCDGT-----SWYTSTKELQRASLEFCIACRNYPIMHLKVDPQIPRNLLAAADAPPP-HPKRLCWTRVPRLRARSVTWNMRAAAELGNPIFAITDVDCLEFGGTFDGSLEAVTWPRRLK 137
BLAST of mRNA_L-elsbetiae_contig6315.14956.1 vs. uniprot
Match: A0A6H5JUA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA5_9PHAE) HSP 1 Score: 100 bits (249), Expect = 2.610e-19 Identity = 62/136 (45.59%), Postives = 77/136 (56.62%), Query Frame = 3 Query: 3 GPSR--CLDAFIIALNQASDGRKRECRSWYTSAKELQLASLEFCTACRSVPTLHVKIEKGTPIRLWIHAPAQETCSAKRTSSTRVPVVRARAVTWKLSDSE-LRSMGDAFSKVKRFTFDTNFNGDVCGVKWPRELK 401 GP+R CL+A I+ALN+ SDG+ SWYTS KE QLASLEFC ACR+ TL +K++ TP RL A A KR TRVP +RAR VTW + + LR+ + F F + V WPR LK Sbjct: 6 GPARDSCLNAIIVALNETSDGK-----SWYTSTKERQLASLEFCIACRNHQTLDLKVDSRTPRRLLAAADAPPP-HPKRLCGTRVPRLRARRVTWDIPTAAGLRNSIYSMMDADSLEFVRAFEDSLEAVAWPRRLK 135
BLAST of mRNA_L-elsbetiae_contig6315.14956.1 vs. uniprot
Match: A0A6H5JF56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF56_9PHAE) HSP 1 Score: 101 bits (252), Expect = 7.180e-19 Identity = 58/121 (47.93%), Postives = 75/121 (61.98%), Query Frame = 3 Query: 3 GPSRCLDAFIIALNQASDGRKRECRSWYTSAKELQLASLEFCTACRSVPTLHVKIEKGTPIRLWIHAPAQETCSAKRTSSTRVPVVRARAVTWKLSDSELRSMGDAF-SKVKRFTFDTNFN 362 G +RCLDAF++ALNQ+ DG+K WYTS LQLASL FC ACR+V + ++KGTP+RLW P T+ TRVP +R R V WKL++ R G A S ++R TF +FN Sbjct: 32 GLNRCLDAFVVALNQSCDGKK-----WYTSIAGLQLASLAFCVACRNVLAPCLTVDKGTPLRLWC-GPCTTPLEVL-TTVTRVPAIRVREVVWKLTE---RKDGIALPSSLRRITFGRDFN 142
BLAST of mRNA_L-elsbetiae_contig6315.14956.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE) HSP 1 Score: 99.0 bits (245), Expect = 2.100e-18 Identity = 57/136 (41.91%), Postives = 81/136 (59.56%), Query Frame = 3 Query: 3 GPSR--CLDAFIIALNQASDGRKRECRSWYTSAKELQLASLEFCTACRSVPTLHVKIEKGTPIRLWIHAPAQETCSAKRTSSTRVPVVRARAVTWKL-SDSELRSMGDAFSKVKRFTFDTNFNGDVCGVKWPRELK 401 GP+R CL+A I+ALN+ DG+ SWYTS KELQLASL+FC ACR+ T+H+ +++ P RL A A KR TRVP +R+R VTW + + ++LR+ A + ++ F F + V WP L+ Sbjct: 45 GPTRKFCLEALIVALNETCDGK-----SWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPPP-HPKRLCWTRVPRLRSRRVTWNMPTAAKLRTPIFAMTDMEYLEFGDAFGDSLEAVPWPEHLR 174
BLAST of mRNA_L-elsbetiae_contig6315.14956.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 2.330e-18 Identity = 59/139 (42.45%), Postives = 76/139 (54.68%), Query Frame = 3 Query: 3 GPSRCLDAFIIALNQASDGRKRECRSWYTSAKELQLASLEFCTACRSVPTLHVKIEKGTPIRLWIHAPAQ---ETCSAKRTSSTRVPVVRARAVTWKLSDSEL--RSMGDAFSKVKRFTFDTNFNGDVCG-----VKWP 389 G +R DAF IAL+QA +G ++ WYTS ELQL SL+ C ACRS PTLHV++ GTP LW Q T S+K +RVPVVRA +TW S L R+ + +S+ +R G +C V WP Sbjct: 5 GYTRSFDAFAIALSQACEGGEKR---WYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERL----EMVGPLCAASLGSVVWP 136
BLAST of mRNA_L-elsbetiae_contig6315.14956.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE) HSP 1 Score: 99.4 bits (246), Expect = 4.020e-18 Identity = 60/136 (44.12%), Postives = 75/136 (55.15%), Query Frame = 3 Query: 3 GPSR--CLDAFIIALNQASDGRKRECRSWYTSAKELQLASLEFCTACRSVPTLHVKIEKGTPIRLWIHAPAQETCSAKRTSSTRVPVVRARAVTWKL-SDSELRSMGDAFSKVKRFTFDTNFNGDVCGVKWPRELK 401 GP+R CL +ALN+ DG+ SWYTS KELQLASLE C ACR TLH+ ++ TP RL A A KR TRVP +RAR TW + + S +R+ A V F F+G + + WPR LK Sbjct: 130 GPTRSSCLKTLTVALNETCDGK-----SWYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLLAAADAPSP-HPKRLCGTRVPRLRARRATWNVPTASGMRTSIFATMDVDYLEFGQAFHGSLDAIVWPRRLK 259 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6315.14956.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6315.14956.1 >prot_L-elsbetiae_contig6315.14956.1 ID=prot_L-elsbetiae_contig6315.14956.1|Name=mRNA_L-elsbetiae_contig6315.14956.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=436bp MGDAFSKVKRFTFDTNFNGDVCGVKWPRELKELTFGDAFNQTVVTFAWPKback to top mRNA from alignment at L-elsbetiae_contig6315:2545..4467+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6315.14956.1 ID=mRNA_L-elsbetiae_contig6315.14956.1|Name=mRNA_L-elsbetiae_contig6315.14956.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1923bp|location=Sequence derived from alignment at L-elsbetiae_contig6315:2545..4467+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6315:2545..4467+ >mRNA_L-elsbetiae_contig6315.14956.1 ID=mRNA_L-elsbetiae_contig6315.14956.1|Name=mRNA_L-elsbetiae_contig6315.14956.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2616bp|location=Sequence derived from alignment at L-elsbetiae_contig6315:2545..4467+ (Laminarionema elsbetiae ELsaHSoW15)back to top |