prot_L-elsbetiae_contig630.14936.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig630.14936.1
Unique Name	prot_L-elsbetiae_contig630.14936.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	274

Homology

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BLAST of mRNA_L-elsbetiae_contig630.14936.1 vs. uniprot
Match: D7FQV2_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV2_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 1.770e-25
Identity = 71/170 (41.76%), Postives = 100/170 (58.82%), Query Frame = 0

Query:   16 IVLKGSTVEDAPEKASDGAPFAFCVRASYSAEDDKSPGQAWTLQASNRQEKCRWVNAIRGAAHRDTNGISPLGYPVDGEEGEEDSDNEAFVNPSRATAASAPTAVKGEGVA----ADTPTSSSEQSRIMDSLRLSFMSRRNSSEGSNVGGGSDSNNSAGVASDNGTGGEV 181
            + LKG +VEDAPEK  +GAPFAF VRA     +D +PG +WTLQAS RQEK RW+NAIRGAA R+ + +SP G P++       +D+ +FV+        A + + G G      A   +S +EQ R++D LR+S  ++R   E  +  G  DS NSA  ++  G  G+ 
Sbjct:    1 MALKGCSVEDAPEKVPEGAPFAFRVRAQQCPRNDDNPGASWTLQASTRQEKSRWMNAIRGAADREMDDVSPPGSPLN-------ADDTSFVD--------ADSGISGGGYGKEGDASNSSSGAEQHRVLDMLRMSAAAQRGFQESDSDSG--DSRNSASKSAGKGVDGKA 153

[Close]

BLAST of mRNA_L-elsbetiae_contig630.14936.1 vs. uniprot
Match: A0A6H5KTG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTG5_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 3.760e-17
Identity = 69/170 (40.59%), Postives = 89/170 (52.35%), Query Frame = 0

Query:    2 AFSGWGGGHSCVGRIVLKGSTVEDAPEKASDGAPFAFCVRASYSAEDDKSPGQAWTLQASNRQEKCRWVNAIRGAAHRDTNGISPLGYPVDGEEGEEDSDNEAFVNPSRATAASAPTAVKGEGVAADTPTSSS--EQSRIMDSLRLSFMSRRNSSEGSNVGGGSDSNNSA 169
            AFSGWGG H+CVG++ LKG +VEDAPEK  +GAPFAF VRA           Q W            W+NAIRGAA RD + +S  G P++       +D+ +FV+     +        G G   D   SSS  EQ RI+D  R+S  ++R   E  +  G  DS NSA
Sbjct:  764 AFSGWGGNHTCVGKMALKGCSVEDAPEKVPEGAPFAFRVRA-----------QQW------------WMNAIRGAADRDMDDVSLPGSPLN-------ADDTSFVDADSGRSGG------GYGKEGDASNSSSGAEQHRILDMFRMSPAAQRGFQESDSDSG--DSRNSA 895

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig630.14936.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig630.14936.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FQV2_ECTSI	1.770e-25	41.76	PH domain-containing protein n=1 Tax=Ectocarpus si...	[more]
A0A6H5KTG5_9PHAE	3.760e-17	40.59	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 7..116 e-value: 2.4E-6 score: 29.4
IPR001849	Pleckstrin homology domain	PROSITE	PS50003	PH_DOMAIN	coord: 1..78 score: 7.763
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 9..86

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig630	contig	L-elsbetiae_contig630:8430..10752 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig630.14936.1	mRNA_L-elsbetiae_contig630.14936.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig630 8428..11404 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig630.14936.1 ID=prot_L-elsbetiae_contig630.14936.1|Name=mRNA_L-elsbetiae_contig630.14936.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=274bp
MAFSGWGGGHSCVGRIVLKGSTVEDAPEKASDGAPFAFCVRASYSAEDDK
SPGQAWTLQASNRQEKCRWVNAIRGAAHRDTNGISPLGYPVDGEEGEEDS
DNEAFVNPSRATAASAPTAVKGEGVAADTPTSSSEQSRIMDSLRLSFMSR
RNSSEGSNVGGGSDSNNSAGVASDNGTGGEVGTGTRETAAAAGEEDTATE
SEAKRAAGEGGGGDDVALLVDSKAATRSSPLGVIGDGRRGLRSRSSSSSM
SVPTEETRTHWEDEQPAQSCAFQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011993	PH-like_dom_sf
IPR001849	PH_domain