mRNA_L-elsbetiae_contig630.14935.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig630.14935.1
Unique NamemRNA_L-elsbetiae_contig630.14935.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig630.14935.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig630contigL-elsbetiae_contig630:6662..7395 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size735
Cds size732
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816694.5138106-CDS-L-elsbetiae_contig630:6661..73931622816694.5138106-CDS-L-elsbetiae_contig630:6661..7393Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig630 6662..7393 +
1691683745.7563324-CDS-L-elsbetiae_contig630:6661..73931691683745.7563324-CDS-L-elsbetiae_contig630:6661..7393Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig630 6662..7393 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig630.14935.1prot_L-elsbetiae_contig630.14935.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig630 6662..7393 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig630.14935.1

>prot_L-elsbetiae_contig630.14935.1 ID=prot_L-elsbetiae_contig630.14935.1|Name=mRNA_L-elsbetiae_contig630.14935.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=244bp
DDAQAGGPLTEDPGGDLSDVAAAAVDAAAASETARTAAAEHGGRPCLPRK
SVDFSGGGTLQMDPRQSRGLAGVGTASAAGHDSYLCILPMDADGEAQGIE
LAAGGRSRGSEDGKGTALPVLSENDCSDDRDTTVALLAVALLVGKNHHFD
RASEHGSQCGSLLVPSEEPPLMGKAATTAAAAVVVAAAGVAAAKAAPAKG
TAPVIFTAGASTKERAGDVGVLETLSEAEEIAGPGRSSQCFVQQ
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mRNA from alignment at L-elsbetiae_contig630:6662..7395+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig630.14935.1 ID=mRNA_L-elsbetiae_contig630.14935.1|Name=mRNA_L-elsbetiae_contig630.14935.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=734bp|location=Sequence derived from alignment at L-elsbetiae_contig630:6662..7395+ (Laminarionema elsbetiae ELsaHSoW15)
GATGATGCCCAAGCTGGTGGGCCACTGACAGAAGATCCTGGAGGAGACCT
GTCGGATGTAGCGGCGGCGGCGGTGGATGCGGCGGCTGCTAGCGAGACGG
CTAGAACGGCGGCGGCCGAACACGGCGGCCGTCCTTGTCTTCCTCGGAAG
AGCGTCGATTTTAGCGGAGGTGGGACGCTCCAGATGGACCCGAGACAAAG
CCGGGGCTTGGCGGGGGTTGGGACGGCGTCGGCGGCTGGCCACGATAGTT
ATTTGTGCATTTTGCCGATGGATGCTGACGGCGAGGCCCAAGGAATAGAG
CTGGCGGCGGGGGGCAGGAGCCGAGGCAGTGAAGATGGGAAAGGCACGGC
GCTCCCGGTCTTGTCGGAAAATGATTGCAGCGATGACAGGGATACGACAG
TGGCTCTGCTGGCGGTGGCGTTGCTGGTCGGGAAGAACCATCACTTCGAT
CGGGCCAGCGAACACGGGAGTCAGTGCGGGAGTCTGCTTGTTCCATCGGA
GGAACCCCCACTTATGGGAAAAGCAGCAACCACAGCGGCGGCGGCGGTGG
TGGTGGCGGCGGCGGGCGTAGCCGCAGCAAAGGCAGCTCCCGCGAAGGGA
ACAGCGCCAGTCATTTTCACTGCCGGAGCTTCGACGAAAGAGCGAGCCGG
AGATGTTGGCGTGCTTGAGACATTGTCGGAAGCAGAGGAGATCGCGGGCC
CTGGTAGAAGCAGCCAGTGCTTCGTACAACAACA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig630:6662..7395+

>mRNA_L-elsbetiae_contig630.14935.1 ID=mRNA_L-elsbetiae_contig630.14935.1|Name=mRNA_L-elsbetiae_contig630.14935.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1464bp|location=Sequence derived from alignment at L-elsbetiae_contig630:6662..7395+ (Laminarionema elsbetiae ELsaHSoW15)
GATGATGCCCAAGCTGGTGGGCCACTGACAGAAGATCCTGGAGGAGACCT
GTCGGATGTAGCGGCGGCGGCGGTGGATGCGGCGGCTGCTAGCGAGACGG
CTAGAACGGCGGCGGCCGAACACGGCGGCCGTCCTTGTCTTCCTCGGAAG
AGCGTCGATTTTAGCGGAGGTGGGACGCTCCAGATGGACCCGAGACAAAG
CCGGGGCTTGGCGGGGGTTGGGACGGCGTCGGCGGCTGGCCACGATAGTT
ATTTGTGCATTTTGCCGATGGATGCTGACGGCGAGGCCCAAGGAATAGAG
CTGGCGGCGGGGGGCAGGAGCCGAGGCAGTGAAGATGGGAAAGGCACGGC
GCTCCCGGTCTTGTCGGAAAATGATTGCAGCGATGACAGGGATACGACAG
TGGCTCTGCTGGCGGTGGCGTTGCTGGTCGGGAAGAACCATCACTTCGAT
CGGGCCAGCGAACACGGGAGTCAGTGCGGGAGTCTGCTTGTTCCATCGGA
GGAACCCCCACTTATGGGAAAAGCAGCAACCACAGCGGCGGCGGCGGTGG
TGGTGGCGGCGGCGGGCGTAGCCGCAGCAAAGGCAGCTCCCGCGAAGGGA
ACAGCGCCAGTCATTTTCACTGCCGGAGCTTCGACGAAAGAGCGAGCCGG
AGATGTTGGCGTGCTTGAGACATTGTCGGAAGCAGAGGAGATCGCGGGCC
CTGGTAGAAGCAGCCAGTGCTTCGTACAACAAGATGATGCCCAAGCTGGT
GGGCCACTGACAGAAGATCCTGGAGGAGACCTGTCGGATGTAGCGGCGGC
GGCGGTGGATGCGGCGGCTGCTAGCGAGACGGCTAGAACGGCGGCGGCCG
AACACGGCGGCCGTCCTTGTCTTCCTCGGAAGAGCGTCGATTTTAGCGGA
GGTGGGACGCTCCAGATGGACCCGAGACAAAGCCGGGGCTTGGCGGGGGT
TGGGACGGCGTCGGCGGCTGGCCACGATAGTTATTTGTGCATTTTGCCGA
TGGATGCTGACGGCGAGGCCCAAGGAATAGAGCTGGCGGCGGGGGGCAGG
AGCCGAGGCAGTGAAGATGGGAAAGGCACGGCGCTCCCGGTCTTGTCGGA
AAATGATTGCAGCGATGACAGGGATACGACAGTGGCTCTGCTGGCGGTGG
CGTTGCTGGTCGGGAAGAACCATCACTTCGATCGGGCCAGCGAACACGGG
AGTCAGTGCGGGAGTCTGCTTGTTCCATCGGAGGAACCCCCACTTATGGG
AAAAGCAGCAACCACAGCGGCGGCGGCGGTGGTGGTGGCGGCGGCGGGCG
TAGCCGCAGCAAAGGCAGCTCCCGCGAAGGGAACAGCGCCAGTCATTTTC
ACTGCCGGAGCTTCGACGAAAGAGCGAGCCGGAGATGTTGGCGTGCTTGA
GACATTGTCGGAAGCAGAGGAGATCGCGGGCCCTGGTAGAAGCAGCCAGT
GCTTCGTACAACAA
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