mRNA_L-elsbetiae_contig6293.14921.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6293.14921.1 vs. uniprot
Match: D7FXV3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXV3_ECTSI) HSP 1 Score: 488 bits (1257), Expect = 1.640e-166 Identity = 244/343 (71.14%), Postives = 269/343 (78.43%), Query Frame = 3 Query: 222 MCDSCDAYRHESGGNKTIEYADHIRAKVSSLTIAAAAFKVKGFMRFVFHRKNMREEVRRQYSRFFNGRSRRHFYNFHRTGEVTWKKPLLLGKEELRPFLTIDQAAFKIQQLHRNWRAREVARDAMRMAWNRVYSPQERRFFFFYKGKSPLILPRTASWVQPCRSIGGVWVWRPVLSEHVAAMRIQNMWRNFMGRRELRKLVRQMYAMENDPITGTKRYRNLQTGEVSADKPLSLGSERWDQEDMMLWTVEEVVLFIRRCGLKRFTPRLRHFNVDGALLMTFDPEDFLLLGQADSVNAKKILLNIERRPAFNGYNKRAKDLLRRAALRQRHFEETQAEIIQRWW 1250 MCDSCDAYRH+SGGNKTIEY DH RAK VTW KP LLGKEELRPFLT+++AAFK+QQLHRNW+ARE+ARDAMR+AWNRVYSPQERRFFFFYKG+SPL+LP TASW QPCRSIGG+WVWRPVLSEHVAAMRIQN+WRNF GRR+LR+ VRQMY+ME+DPITG + YRNL+TGEVS KPLSLGSERWDQ+DMMLWTVEEVV+FIRRCGLKRF P++RHFNVDGALLMTFDPEDFLLLGQADSVNAKKILLNIERRPAF+GYNKRAKDLLRRAALRQRH E TQ ++ W Sbjct: 1 MCDSCDAYRHQSGGNKTIEYTDHERAK------------------------------------------------------VTWSKPRLLGKEELRPFLTVNEAAFKMQQLHRNWKAREIARDAMRVAWNRVYSPQERRFFFFYKGESPLVLPTTASWTQPCRSIGGIWVWRPVLSEHVAAMRIQNLWRNFAGRRDLRERVRQMYSMEHDPITGAECYRNLKTGEVSDRKPLSLGSERWDQDDMMLWTVEEVVMFIRRCGLKRFAPKIRHFNVDGALLMTFDPEDFLLLGQADSVNAKKILLNIERRPAFSGYNKRAKDLLRRAALRQRHLEGTQYTQVRLTW 289
BLAST of mRNA_L-elsbetiae_contig6293.14921.1 vs. uniprot
Match: A0A835YL39_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL39_9STRA) HSP 1 Score: 408 bits (1049), Expect = 9.460e-131 Identity = 203/390 (52.05%), Postives = 269/390 (68.97%), Query Frame = 3 Query: 84 GLSRHRKAEIVLALHINGIQYEHGKLCEFCESGPATKHCPDDVCGFMCDSCDAYRHESGGNKTIEYADHIRAKVSSLTIAAAAFKVKGFMRFVFHRKNMREEVRRQYSRFFNGRSRRHFYNFHRTGEVTWKKPLLLGKEELRPFLTIDQAAFKIQQLHRNWRAREVARDAMRMAWNRVYSPQERRFFFFYKGKSPLILPRTASWVQPCRSIGGVWVWRPVLSEHVAAMRIQNMWRNFMGRRELRKLVRQMYAMENDPITGTKRYRNLQTGEVSADKPLSLGSERWDQEDMMLWTVEEVVLFIRRCGLKRFTPRLRHFNVDGALLMTFDPEDFLLLGQADSVNAKKILLNIERRPAFNGYNKRAKDLLRRAALRQRHFEETQAEIIQRWWR 1253 G +R KA+I LAL ING+ + G LC C D C YRH + NK Y H R+K+S LT+ +AAFKV+GFMRF+ R+ +R R Q+ R+++ + RRH+Y F RTG V+W KP +LG EELRPFLT D+AAFK+QQLHRNWRARE AR+ +R W+R+YSP E+RF++ YKG SPL+LP+ A W QPCR +G W+WRP+L+E +AA+R+Q WR GRRE+R +VR++Y++++DPITG YRN TGEV A KP+ LGSE WD DMM W V++ ++FIRRCGLK + R + VDGALL+T DP D LLG + ++ K++LL IERRP F GYN R +D+LRR ALRQ ++ A ++QRWWR Sbjct: 15 GATRRHKAKIELALSINGVPF--GFLCREC-----------DECXXXXXXXXEYRHCNAVNKA--YHAHKRSKLSKLTMDSAAFKVQGFMRFLSARRLLRRRCREQWQRYYSSQRRRHYYCFTRTGRVSWHKPRVLGSEELRPFLTRDEAAFKMQQLHRNWRARERARNLLRRYWDRIYSPAEKRFYYHYKGDSPLVLPQRARWSQPCRMMGREWIWRPLLTESMAALRVQTFWRAASGRREIRDIVRRVYSLQSDPITGRPAYRNNITGEVQATKPVLLGSELWDPVDMMQWGVDQTIIFIRRCGLKPYARAFRRYGVDGALLLTLDPSDLALLGMDNPIHVKRVLLGIERRPGFQGYNTRPEDMLRRTALRQACRQDAAAAVLQRWWR 389
BLAST of mRNA_L-elsbetiae_contig6293.14921.1 vs. uniprot
Match: A0A7S4E5F1_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E5F1_9STRA) HSP 1 Score: 244 bits (624), Expect = 4.020e-69 Identity = 176/528 (33.33%), Postives = 272/528 (51.52%), Query Frame = 3 Query: 123 LHINGIQYEHGKLCEFCESGPATKHCPDDVC------GFMCDSCDAYRHESGGNKTIEYADHIRAKVSSLTIAAAAFKVKGFMRFVFHRKNMREEVRRQYSRFFNGRSRRHFYNFHRTGEVTWKKPLLLGKEELRPFLTIDQAAFKIQQLHRNWRAREVARDAMRMAWNRVYSPQERRFFFFYKGKSPLILPRTASWVQPCRSIGGVWVWRPVL---SEHVAAMRIQNMWRNFMGRRELRKLVRQMYAMENDPITGTKRYRNLQTGEVSADKPLSLGSERWDQEDMMLWTVEEVVLFIRRCGLKRFTPRLRHFNVDGALLMTFDPEDFLLLGQADSVNAKKILLNIERRPAFNGYNKRAKDLLRRAALRQRHFEETQAEIIQRWWREMMREARRRLWKRTFATAKAEEEREKKRKESAIWWTDKIRDYAGLDASIKLFGRRSNILGVRGWGRWDARGRRWTAAPEEVGAPHRSRLMYRDAPDSA----ALPIH-----SVEEM-------LFKEDQARRRADRARAAA 1631 + +N K C+FCE A HCP F+CDSCD H + ++ +HIR ++ +T A K+ G +++ RK + + R ++ RFF+ ++ +FY E +W+KPL L + EL P+ + D F+IQ L R+ AR + +R +++++S + RF++ + GKS L+ PR A W +P R + WR + SE VAA+ IQN W + R+ + VR Y ++ DP+TG Y N+ T + KP LGSE D EDM LW + + +F RR G P LR F+VDGALL++F+ +D++ LG S K++LL IE+R F + L+RR LR H E A IQR +R + +R KA+++ EK RKE +WW+ KI++ D K++G R+ + V GWG W G +W ++ PH+ R Y+ P + A +H +V+E L +ED +R+A+ A AAA Sbjct: 33 IFVNQTVIPFKKTCDFCEEKRAVFHCPKCTTTATGTGDFLCDSCDLEVH-----RHVKRRNHIRTQIPDVTAREAVHKIMGCFKYLLARKVLVAKCRLEFQRFFDPPTKTYFYFRPSIQETSWRKPLCLKEAELCPYPSFDDYVFRIQGLARHKAARNYLIELIRQTYDKIFSREYTRFYYHFNGKSTLV-PRVA-WTKP-RFL----YWRDLKAFKSEDVAALMIQNQWHAYKARQFMMNAVRAQYTVKTDPLTGRLMYTNVHTHKRGFKKPPLLGSEELDPEDMSLWGIYRLGVFFRRLGYGFIAPELRRFDVDGALLLSFEWQDYVDLGFTQSHVIKRVLLQIEKRAFFKSHRDLPVTLVRRDRLRYHHRVEKAAISIQRRYRVIYAALQRARAAERERVEKAKKKAEKDRKEGGLWWSGKIKNLPVPDHG-KVYGNRT-VETVHGWGSWI--GEKWVPLDDKT-RPHKQR--YKHNPLNVRFKFARTLHFKNDDAVQEQRAALVARLLEEDMRQRQAEAAVAAA 541
BLAST of mRNA_L-elsbetiae_contig6293.14921.1 vs. uniprot
Match: A0A7S1UJU0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJU0_9STRA) HSP 1 Score: 229 bits (584), Expect = 5.660e-63 Identity = 151/459 (32.90%), Postives = 239/459 (52.07%), Query Frame = 3 Query: 123 LHINGIQYEHGKLCEFCESGPATKHCPDDVCGFMCDSCDAYRHESGGNKTIEYADHIRAKVSSLTIAAAAFKVKGFMRFVFHRKNMREEVRRQYSRFFNGRSRRHFYNFHRTGEVT--WKKPLLLGKEELRPFLTIDQAAFKIQQLHRNWRAREVARDAMRMAWNRVYSPQERRFFFFYKGKSPLILPRTASWVQPCRSIGGVWVWRPVLSEHVAAMRIQNMWRNFMGRRELRKLVRQMYAMENDPITGTKRYRNLQTGEVSADKPLSLGSERWDQEDMMLWTVEEVVLFIRRCGLKRFTPRLRHFNVDGALLMTFDPEDFLLLGQADSVNAKKILLNIERRPAFNGYNKRAKDLLRRAALRQRHFEETQAEIIQRWWREMMREARRRLWKRTFATAKAEEEREKKRKESAIWWTDKIRDYAGLDASIKLFGRRSNILGVRGWGRWDARGRRWTAAPEE 1493 L ING+ YE GK+C FCE+ A HC + F+C+ CD +H + A+H+R KVS + + F R V R+ +R R+++ R ++ H+Y G +T W KP+ L ++EL P+LT+ +AA +IQ R++ ++ + ++++Y +++FYKG+SP I + SW +P S+ + + VL+ +AA+RIQN +R+ LR++VR Y P+TG ++ L V +PL LGSERWD+ED+ L +V+EV +F+RR G KR+ + F VDG L F+ EDF +LG A + KKI L ++ + Y +++R A+RQ+H + A ++Q +R + +A E R + + WWT K+ Y G K FGR L +GWGRW G RW P++ Sbjct: 52 LWINGVNYEFGKMCMFCEAEKARFHCVE-CADFLCEGCDGEKHRHK-----KRANHVRQKVSKYNLDTGTTTITHFFRTVRCRRLLRRRCRQRFRRIYSPEYGIHYYYDTGVGYMTSQWTKPVCLNRQELLPWLTMTEAAMRIQACARSYICFKLLLWRVHQNFDKIYDHDTSCYYYFYKGRSPYI--KKVSWRKPL-SLHSHDI-KAVLTVDMAAVRIQNAYRSRKSMCFLREVVRANYERLIHPLTGEYYFQRLDKPGVMMPRPLLLGSERWDREDLSLMSVDEVCIFMRRLGFKRYVSVFKQFKVDGELFTCFEWEDFEMLGVAGAHEIKKIFLKLQESEWYMNYKPPPMTIVKRNAMRQQHKIFSAAVVVQAAFRGYYCRNNYAFLRIKTRVQRAAELRRLEVEAGGGWWTAKVGPYEG--ERFKAFGRHGYFLSAQGWGRWQ--GDRWIEIPKD 496
BLAST of mRNA_L-elsbetiae_contig6293.14921.1 vs. uniprot
Match: A0A7S1Y0Q5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y0Q5_9STRA) HSP 1 Score: 104 bits (260), Expect = 1.640e-21 Identity = 59/186 (31.72%), Postives = 100/186 (53.76%), Query Frame = 3 Query: 123 LHINGIQYEHGKLCEFCESGPATKHCPDDVCGFMCDSCDAYRHESGGNKTIEYADHIRAKVSSLTIAAAAFKVKGFMRFVFHRKNMREEVRRQYSRFFNGRSRRHFYNFHRTGEVT--WKKPLLLGKEELRPFLTIDQAAFKIQQLHRNWRAREVARDAMRMAWNRVYSPQERRFFFFYKGKSPLI 674 L ING+ YE GK+C FCE+ A HC + F+C+ CD +H + A+H+R KVS + + F R V R+ +R R+++ R ++ H+Y G +T W KP+ L ++EL P+LT+ +AA +IQ R++ ++ + ++++Y +++FYKG+SP I Sbjct: 52 LWINGVNYEFGKMCMFCEAEKARFHCVE-CADFLCEGCDGEKHRHK-----KRANHVRQKVSKYNLDTGTTTITHFFRTVRCRRLLRRRCRQRFRRIYSPEYGIHYYYDTGVGYMTSQWTKPVCLNRQELLPWLTMTEAAMRIQACARSYICFKLLLWRVHQNFDKIYDHDTSCYYYFYKGRSPYI 231 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6293.14921.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6293.14921.1 >prot_L-elsbetiae_contig6293.14921.1 ID=prot_L-elsbetiae_contig6293.14921.1|Name=mRNA_L-elsbetiae_contig6293.14921.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=529bp MPPPLLSQPTGLSRHRKAEIVLALHINGIQYEHGKLCEFCESGPATKHCPback to top mRNA from alignment at L-elsbetiae_contig6293:1759..11034+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6293.14921.1 ID=mRNA_L-elsbetiae_contig6293.14921.1|Name=mRNA_L-elsbetiae_contig6293.14921.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9276bp|location=Sequence derived from alignment at L-elsbetiae_contig6293:1759..11034+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6293:1759..11034+ >mRNA_L-elsbetiae_contig6293.14921.1 ID=mRNA_L-elsbetiae_contig6293.14921.1|Name=mRNA_L-elsbetiae_contig6293.14921.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3174bp|location=Sequence derived from alignment at L-elsbetiae_contig6293:1759..11034+ (Laminarionema elsbetiae ELsaHSoW15)back to top |