mRNA_L-elsbetiae_contig6285.14908.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6285.14908.1
Unique NamemRNA_L-elsbetiae_contig6285.14908.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig6285.14908.1 vs. uniprot
Match: A0A6H5JEE3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEE3_9PHAE)

HSP 1 Score: 339 bits (869), Expect = 3.790e-114
Identity = 162/196 (82.65%), Postives = 175/196 (89.29%), Query Frame = 1 
Query:    1 VTMSETGISWKSDRETRFKQPPGFTFAECPLTSTCAGCLGDG-HDNCGDFTDPQTLTEYKFWYPENAKTQYLYETYPEVVSPIEGVLNEHFIVWMRTAGLPRFRKLYGKIEEQIEPPQVLTFNITANFFVGDFDGEKSIIVSTLSLMGARNPYLGIAYIALGSLSLAIGLAFLIKHYSDPRKLGDTRFLVWKDTTL 585
            VTMSE  ISWKSDRETRFKQPPGFTFAEC   ++C+ CLG   + +CGD TD  T TEYKFWYP++  TQ+LYETYP VVSPIEGVLNEHFIVWMRTAGLPRFRKLYG+I+EQIE PQVLTFNITANFFVGDF GEKS++VS LSLMGARNPYLGIAYIALGSLSLAIGLAFLIKH S+PRKLGDTRFLVWKDTTL
Sbjct:  193 VTMSEKDISWKSDRETRFKQPPGFTFAECSANTSCSDCLGGSKYSSCGDHTDESTGTEYKFWYPDDETTQFLYETYPGVVSPIEGVLNEHFIVWMRTAGLPRFRKLYGRIDEQIEAPQVLTFNITANFFVGDFSGEKSLVVSNLSLMGARNPYLGIAYIALGSLSLAIGLAFLIKHLSNPRKLGDTRFLVWKDTTL 388
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BLAST of mRNA_L-elsbetiae_contig6285.14908.1 vs. uniprot
Match: A0A6S9FRN7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FRN7_HETAK)

HSP 1 Score: 192 bits (489), Expect = 5.580e-57
Identity = 97/200 (48.50%), Postives = 127/200 (63.50%), Query Frame = 1 
Query:    1 VTMSETGISWKSDRETRFKQPPGFTFA---------ECPLTSTCAGCLGDGHDNCGDFTDPQTLTEYKFWYPENAKTQYLYETYPEVVSPIEGVLNEHFIVWMRTAGLPRFRKLYGKIEEQIEPPQVLTFNITANFFVGDFDGEKSIIVSTLSLMGARNPYLGIAYIALGSLSLAIGLAFLIKHYSDPRKLGDTRFLVWK 573
            V + ETGI+W SDR T+F QP GF +          E P T   A    D +D+C  +TD +  T Y ++YPEN + QYLYET+PEV++PIEGV NEHFIVWMRTA LP+FRKLYG I+  +     +TF +TAN+ V  FDG KSII++  S  G +N  LG+ YI  G +SL++ +AF IK    PR L +   L+WK
Sbjct:  172 VALDETGITWDSDRATKFAQPDGFAYVTLGDDAGCTELPCTCETAFDSSD-YDDCEFYTDAENTT-YAYYYPENDEIQYLYETFPEVINPIEGVTNEHFIVWMRTAALPKFRKLYGIIDTDLTEGDEITFKVTANYLVSSFDGTKSIILANASWFGGKNAVLGMVYIVAGVVSLSLAIAFGIKQKLQPRALANPAELLWK 369
[Close]
BLAST of mRNA_L-elsbetiae_contig6285.14908.1 vs. uniprot
Match: A0A7R9U6E4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6E4_9STRA)

HSP 1 Score: 191 bits (486), Expect = 2.600e-56
Identity = 99/201 (49.25%), Postives = 122/201 (60.70%), Query Frame = 1 
Query:    1 VTMSETGISWKSDRETRFKQPPGFTFAECPLTSTCAGCLGDGHDNCGDFTDPQTLT---------EYKFWYPENAKTQYLYETYPEVVSPIEGVLNEHFIVWMRTAGLPRFRKLYGKIEEQIEPPQVLTFNITANFFVGDFDGEKSIIVSTLSLMGARNPYLGIAYIALGSLSLAIGLAFLIKHYSDPRKLGDTRFLVWKD 576
            V M E  ISW+SDR+ +F QP  F       TS              D  D Q  +         ++ F+Y    +  YLYE YPEV++P+EGV NEHFIVWMRTAGLP+FRKLYG+IEE I     L F I   F V +FDG+K I+VST +  G RNP+LGIAYI +GS+ L + L F +KH   PRKLGDTR+LVWKD
Sbjct:  190 VEMREDDISWQSDRDAKFDQPDDFISERLRNTSASDKAQACIEQLESDVPDSQVSSIGFTVFEGEDWCFFYRNEDQITYLYEIYPEVINPVEGVNNEHFIVWMRTAGLPQFRKLYGRIEEDIPKGTQLRFQIVPRFIVEEFDGKKFIVVSTTTWFGGRNPFLGIAYIVVGSICLFLSLVFFVKHTVAPRKLGDTRYLVWKD 390
[Close]
BLAST of mRNA_L-elsbetiae_contig6285.14908.1 vs. uniprot
Match: A0A6U4G101_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4G101_9STRA)

HSP 1 Score: 191 bits (485), Expect = 9.560e-56
Identity = 100/203 (49.26%), Postives = 126/203 (62.07%), Query Frame = 1 
Query:    1 VTMSETGISWKSDRETRFKQPPGFTFAECPLTSTC--AGCLGDGHDNCGDFTDPQ------TLTEYKFW---YPENAKTQYLYETYPEVVSPIEGVLNEHFIVWMRTAGLPRFRKLYGKIEEQIEPPQVLTFNITANFFVGDFDGEKSIIVSTLSLMGARNPYLGIAYIALGSLSLAIGLAFLIKHYSDPRKLGDTRFLVWKD 576
            + M+E  I+W+SD++ +F QP  F       T T   A C      N GD    Q      T  E + W   Y       YLYE +PEV++P+EGV NEHFIVWMRTAGLP+FRKLYG+IE+ I     LTF IT  F V +FDG+K ++VST +  G RNP+LGIAYI +G++ LA+ L F  KH   PRKLGDTR+LVWKD
Sbjct:  229 IDMAEDDIAWESDKDAKFDQPDDFVKERYTGTGTATDAACQTQLSSN-GDVPSDQLSNVGSTTFEGEQWCYFYNNEDDITYLYEVFPEVINPVEGVNNEHFIVWMRTAGLPQFRKLYGRIEQDISEGTQLTFQITPRFIVDEFDGKKFLVVSTTTWFGGRNPFLGIAYIVVGAICLALALLFFAKHAISPRKLGDTRYLVWKD 430
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BLAST of mRNA_L-elsbetiae_contig6285.14908.1 vs. uniprot
Match: A0A7S3H696_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H696_9STRA)

HSP 1 Score: 183 bits (464), Expect = 2.510e-53
Identity = 90/191 (47.12%), Postives = 121/191 (63.35%), Query Frame = 1 
Query:    1 VTMSETGISWKSDRETRFKQPPGFTFAECPLTSTCAGCLGDG-HDNCGDFTDPQTLTEYKFWYPENAKTQYLYETYPEVVSPIEGVLNEHFIVWMRTAGLPRFRKLYGKIEEQIEPPQVLTFNITANFFVGDFDGEKSIIVSTLSLMGARNPYLGIAYIALGSLSLAIGLAFLIKHYSDPRKLGDTRFLVW 570
            V+M  + I+W SD+E +FKQP GF      +TST   C  +G  D+C  + DP T T+Y F YP +   QYLYE+YP  +SP+ GV ++HF VWMR A LP+FRKLYGKI+   +    LTF +TANF V  FDG KS+++S L   G +NP+LG+AY+ +GS+SL   L F++K    PR   D   L W
Sbjct:  175 VSMDSSEIAWASDKE-KFKQPQGFQSKV--VTSTANTCAQEGLPDDCKYYQDPATGTQYYFHYPNDNTVQYLYESYPNHISPVVGVTDQHFKVWMRPAALPQFRKLYGKIDHNYKKGDTLTFTVTANFEVESFDGSKSLLISNLGEFGGKNPFLGVAYVVVGSISLMFALLFVVKQTVAPRAKADASLLNW 362
[Close]
BLAST of mRNA_L-elsbetiae_contig6285.14908.1 vs. uniprot
Match: A0A7S3PBZ4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PBZ4_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.150e-52
Identity = 96/201 (47.76%), Postives = 119/201 (59.20%), Query Frame = 1 
Query:    7 MSETGISWKSDRETRFKQPPGFTFAECPLTST-CAGCLGDGHDNCGDFTDPQTLTE-----------YKFWYPENAKTQYLYETYPEVVSPIEGVLNEHFIVWMRTAGLPRFRKLYGKIEEQIEPPQVLTFNITANFFVGDFDGEKSIIVSTLSLMGARNPYLGIAYIALGSLSLAIGLAFLIKHYSDPRKLGDTRFLVWK 573
            MSE GI+W+SD E  F QP GF  A CP   T C      G D  GDF   +   +           Y+++YPE+ KTQYLYETY  ++SP+EGV NEHF+VWMR A  P FRKLYG I E I   Q L FN+TAN+ V  F G KS+I+ST ++ G RNPYLG ++  +G   LA G  F +K    PRKL D   L +K
Sbjct:  195 MSEEGIAWQSDLEYAFAQPEGFRAALCPNNGTLCDETCCTGVDEDGDFAGLEWSCKKPHFEESEGVCYRYYYPEDEKTQYLYETYENIISPLEGVTNEHFVVWMRIATNPTFRKLYGWINEPIPKGQTLVFNVTANYVVSRFRGSKSLILSTNNIFGGRNPYLGASFYGVGFFCLAAGTFFALKQTLRPRKLADPNHLHFK 395
[Close]
BLAST of mRNA_L-elsbetiae_contig6285.14908.1 vs. uniprot
Match: A0A835Z5R6_9STRA (CDC50/LEM3 family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5R6_9STRA)

HSP 1 Score: 181 bits (459), Expect = 1.670e-52
Identity = 91/181 (50.28%), Postives = 121/181 (66.85%), Query Frame = 1 
Query:    7 MSETGISWKSDRETRFKQPPGFTFAECPLTSTCAGCLGDGHDNCGDFTDPQTLTEYKFWYPENAKTQYLYETYPEVVSPIEGVLNEHFIVWMRTAGLPRFRKLYGKIEEQIEPPQVLTFNITANFFVGDFDGEKSIIVSTLSLMGARNPYLGIAYIALGSLSLAIGLAFLIKHYSDPRKLG 549
            M ETGI+W +D + RF QP GF    C  T++CA CLG G+ +CG  TD      + ++YP +A TQYL+ETYP+VVSP+EGV NEHF+VWMRTA LP FRKLYG I+  I     + F+I ANF V +F+G+KSI++++   +G  N  LGIAY+ +G + L +GL  L K    PR LG
Sbjct:  185 MRETGIAWPNDID-RFSQPDGFVKKSCGGTASCASCLGAGYTDCGVATDADGK-RWAYYYPNDATTQYLHETYPKVVSPLEGVTNEHFMVWMRTAALPTFRKLYGIIDSDIPGGWDVQFDINANFLVANFNGKKSIVLASSVGVGGFNGALGIAYLVIGGVLLLVGLLLLAKVLLKPRPLG 363
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BLAST of mRNA_L-elsbetiae_contig6285.14908.1 vs. uniprot
Match: B7FWW6_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FWW6_PHATC)

HSP 1 Score: 181 bits (458), Expect = 3.740e-52
Identity = 91/198 (45.96%), Postives = 122/198 (61.62%), Query Frame = 1 
Query:    1 VTMSETGISWKSDRETRFKQPPGFTFAECPLTSTCAGCLGDGHDN-----CG-DFTDPQTLTEYKFWYPENAKTQYLYETYPEVVSPIEGVLNEHFIVWMRTAGLPRFRKLYGKIEEQIEPPQVLTFNITANFFVGDFDGEKSIIVSTLSLMGARNPYLGIAYIALGSLSLAIGLAFLIKHYSDPRKLGDTRFLVWKD 576
            + M ETGI+WKSD E  ++QP GF +AEC   +  + C     +N     CG  + D +T   + + YP   +TQYLYETYP+V+SPIEGV NEHF+VWMR A  P FRKLYG I++ I   + L F + AN+ V  F G KS+++ST ++ G RNPY G  +  +G   LA G  F  KH   PR+LGD  +L +KD
Sbjct:  191 LEMLETGIAWKSDIEYMYRQPEGFEYAECEPNACDSTCCERTTENGERFSCGAPYFDRKTDKCFAYHYPLQDETQYLYETYPDVISPIEGVTNEHFVVWMRIATQPTFRKLYGWIDQDIPAGETLRFRVNANYVVTRFQGSKSLLISTNNIFGGRNPYFGSFFFWVGIFCLAAGTFFAFKHAFRPRRLGDGNYLHYKD 388
[Close]
BLAST of mRNA_L-elsbetiae_contig6285.14908.1 vs. uniprot
Match: A0A836CGC5_9STRA (CDC50/LEM3 family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGC5_9STRA)

HSP 1 Score: 179 bits (454), Expect = 8.670e-52
Identity = 87/192 (45.31%), Postives = 118/192 (61.46%), Query Frame = 1 
Query:    7 MSETGISWKSDRETRFKQPPGFTFAECPLTSTCAGCL------GDGHDNCGDFTDPQTLTEYKFWYPENAKTQYLYETYPEVVSPIEGVLNEHFIVWMRTAGLPRFRKLYGKIEEQIEPPQVLTFNITANFFVGDFDGEKSIIVSTLSLMGARNPYLGIAYIALGSLSLAIGLAFLIKHYSDPRKLGDTRFL 564
            M ETGI+W +D + +F+QP GF    C  T  CA CL       D +D CG  TD    T Y +WYP+  K QYLYET+P+V+SP+EGV NEHF+VWMR AGL +FRK YGKI + +     +TFN+  NF V  F G KS+++S +S +GA N Y   +++ +G L L + L  ++     PR LGD + L
Sbjct:  175 MEETGIAWNTDLD-KFEQPHGFVTTACAATDECASCLQAAYNSDDDYDGCGIATDASG-TSYAYWYPDEDKIQYLYETFPDVISPLEGVKNEHFMVWMRVAGLRQFRKPYGKISQSLAKGTTVTFNVVNNFLVSSFGGSKSLVMSHVSDLGAPNVYWPQSFLVIGFLVLGLALVVILVQTCAPRPLGDVKML 364
[Close]
BLAST of mRNA_L-elsbetiae_contig6285.14908.1 vs. uniprot
Match: A0A7S1XPZ0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XPZ0_9STRA)

HSP 1 Score: 173 bits (438), Expect = 2.710e-51
Identity = 79/136 (58.09%), Postives = 101/136 (74.26%), Query Frame = 1 
Query:  169 EYKFWYPENAKTQYLYETYPEVVSPIEGVLNEHFIVWMRTAGLPRFRKLYGKIEEQIEPPQVLTFNITANFFVGDFDGEKSIIVSTLSLMGARNPYLGIAYIALGSLSLAIGLAFLIKHYSDPRKLGDTRFLVWKD 576
            ++ ++Y       YLYE +PEV++P+EGV NEHFIVWMRTAGLP+FRKLYG+IE+ I     LTF IT  F V +FDG+K ++VST +  G RNP+LGIAYI +G++ LA+ L F  KH   PRKLGDTR+LVWKD
Sbjct:   72 QWCYFYNNEDDITYLYEVFPEVINPVEGVNNEHFIVWMRTAGLPQFRKLYGRIEQDISEGTQLTFQITPRFIVDEFDGKKFLVVSTTTWFGGRNPFLGIAYIVVGAICLALALLFFAKHAISPRKLGDTRYLVWKD 207
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6285.14908.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEE3_9PHAE3.790e-11482.65Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6S9FRN7_HETAK5.580e-5748.50Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7R9U6E4_9STRA2.600e-5649.25Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6U4G101_9STRA9.560e-5649.26Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S3H696_9STRA2.510e-5347.12Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A7S3PBZ4_9STRA1.150e-5247.76Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A835Z5R6_9STRA1.670e-5250.28CDC50/LEM3 family n=1 Tax=Tribonema minus TaxID=30... [more]
B7FWW6_PHATC3.740e-5245.96Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A836CGC5_9STRA8.670e-5245.31CDC50/LEM3 family n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S1XPZ0_9STRA2.710e-5158.09Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6285contigL-elsbetiae_contig6285:8568..10333 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score337.4
Seed ortholog evalue4.4e-90
Seed eggNOG ortholog2880.D7FT99
Preferred nameTMEM30B
KEGG koko:K08817
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0004012,GO:0005215,GO:0005319,GO:0005548,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005766,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005783,GO:0005794,GO:0005802,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006855,GO:0006869,GO:0006886,GO:0006887,GO:0006897,GO:0006955,GO:0007154,GO:0007165,GO:0007166,GO:0007275,GO:0007399,GO:0008104,GO:0008150,GO:0008509,GO:0008514,GO:0009987,GO:0010008,GO:0010570,GO:0010720,GO:0010876,GO:0010975,GO:0010976,GO:0012505,GO:0012506,GO:0015031,GO:0015075,GO:0015247,GO:0015605,GO:0015711,GO:0015748,GO:0015833,GO:0015893,GO:0015914,GO:0015917,GO:0016020,GO:0016021,GO:0016043,GO:0016192,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022008,GO:0022857,GO:0023052,GO:0030141,GO:0030154,GO:0030659,GO:0030667,GO:0031090,GO:0031224,GO:0031344,GO:0031346,GO:0031410,GO:0031902,GO:0031982,GO:0031984,GO:0032386,GO:0032388,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032940,GO:0032991,GO:0033036,GO:0033043,GO:0033157,GO:0033365,GO:0034204,GO:0034220,GO:0034613,GO:0035577,GO:0035579,GO:0036010,GO:0036230,GO:0040008,GO:0042119,GO:0042221,GO:0042493,GO:0042581,GO:0042582,GO:0042623,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043299,GO:0043312,GO:0043492,GO:0044088,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045184,GO:0045321,GO:0045332,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0046903,GO:0046907,GO:0048518,GO:0048522,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051130,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051239,GO:0051240,GO:0051641,GO:0051649,GO:0051666,GO:0051716,GO:0051960,GO:0051962,GO:0055085,GO:0060284,GO:0060341,GO:0061024,GO:0065007,GO:0065008,GO:0070201,GO:0070727,GO:0070861,GO:0070863,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0090087,GO:0090316,GO:0097035,GO:0097708,GO:0098588,GO:0098656,GO:0098657,GO:0098791,GO:0098805,GO:0098852,GO:0099503,GO:0120035,GO:1902494,GO:1903827,GO:1903829,GO:1904949,GO:1904951,GO:1990351,GO:1990530,GO:1990531,GO:2000026
EggNOG free text desc.aminophospholipid transmembrane transporter activity
EggNOG OGsCOG5035@1,KOG2952@2759
Ec32 ortholog descriptionCDC50/LEM3 family
Ec32 orthologEc-06_003580.1
EC2.7.11.22
COG Functional cat.DKT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01001
Exons3
Model size588
Cds size582
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6285.14908.1prot_L-elsbetiae_contig6285.14908.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6285 8568..10327 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816691.6441782-CDS-L-elsbetiae_contig6285:8567..87791622816691.6441782-CDS-L-elsbetiae_contig6285:8567..8779Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6285 8568..8779 -
1691683743.66954-CDS-L-elsbetiae_contig6285:8567..87791691683743.66954-CDS-L-elsbetiae_contig6285:8567..8779Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6285 8568..8779 -
1622816691.6552246-CDS-L-elsbetiae_contig6285:9425..96001622816691.6552246-CDS-L-elsbetiae_contig6285:9425..9600Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6285 9426..9600 -
1691683743.6812437-CDS-L-elsbetiae_contig6285:9425..96001691683743.6812437-CDS-L-elsbetiae_contig6285:9425..9600Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6285 9426..9600 -
1622816691.6685646-CDS-L-elsbetiae_contig6285:10132..103271622816691.6685646-CDS-L-elsbetiae_contig6285:10132..10327Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6285 10133..10327 -
1691683743.690168-CDS-L-elsbetiae_contig6285:10132..103271691683743.690168-CDS-L-elsbetiae_contig6285:10132..10327Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6285 10133..10327 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816691.679352-UTR-L-elsbetiae_contig6285:10327..103331622816691.679352-UTR-L-elsbetiae_contig6285:10327..10333Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6285 10328..10333 -
1691683743.7016146-UTR-L-elsbetiae_contig6285:10327..103331691683743.7016146-UTR-L-elsbetiae_contig6285:10327..10333Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6285 10328..10333 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6285.14908.1

>prot_L-elsbetiae_contig6285.14908.1 ID=prot_L-elsbetiae_contig6285.14908.1|Name=mRNA_L-elsbetiae_contig6285.14908.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=194bp
MSETGISWKSDRETRFKQPPGFTFAECPLTSTCAGCLGDGHDNCGDFTDP
QTLTEYKFWYPENAKTQYLYETYPEVVSPIEGVLNEHFIVWMRTAGLPRF
RKLYGKIEEQIEPPQVLTFNITANFFVGDFDGEKSIIVSTLSLMGARNPY
LGIAYIALGSLSLAIGLAFLIKHYSDPRKLGDTRFLVWKDTTL*
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mRNA from alignment at L-elsbetiae_contig6285:8568..10333-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6285.14908.1 ID=mRNA_L-elsbetiae_contig6285.14908.1|Name=mRNA_L-elsbetiae_contig6285.14908.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1766bp|location=Sequence derived from alignment at L-elsbetiae_contig6285:8568..10333- (Laminarionema elsbetiae ELsaHSoW15)
GTGACCATGTCCGAGACGGGGATCTCGTGGAAGTCGGACCGCGAGACGCG
CTTCAAGCAGCCCCCCGGGTTCACCTTCGCAGAGTGCCCCCTGACCTCCA
CCTGCGCCGGCTGCCTCGGCGACGGGCACGACAACTGCGGGGACTTCACG
GACCCGCAGACCTTGACGGAGTACAAGTTCTGGTACCCGGAGAATGCCAA
GGTGAGCCGACACTGTCAGGTGAGACTGCCAGGTTTGCGGAGGGGGGGGT
AAGGCCGACCGTCTTGGCCCCCGGTGGCTGGTCTTAGGGCTGACTGGTGG
GATGAGAAGAGAGGAGAGGGGGGGGGGGGGGGTAGGTCCGGACCGGTTTT
AGATGAGTTTATAGGGTCAAGTTGCCATAAGGCCCCAAGAGAAGACCCAC
GCACATGACACTGAGAATGGATGCTATGTTAGTCGTGGCGGACGAAGGTG
AACTCAGGCGTTAAACGCTTAAGTAGTGGCGGCGACCGCGAGATCCCGCG
TAGCCGGAGCGCGGTTAATTTGCCCTCTTTGCTGCTAAATAACGCGCCCA
AAACCGGCACCACCTGTCACACCGTCTCGCACACCCCCCTCTCAACACAA
CTGTTTGCGAGCGGCTCGAACAGGAGGTGGAATGGGACCTCCACCCGATA
GTAAAAGCGGAGGAGCTCTCCCGCCAGCCCTCCCTGCTTTTTTCTTACCG
CTTGCTCCCTGCTCACGCTTCGCTGCGCCACAGACGCAGTACCTGTACGA
GACGTACCCGGAGGTGGTGAGCCCGATCGAGGGTGTCCTGAACGAGCACT
TCATCGTGTGGATGCGCACGGCGGGGCTGCCGCGGTTCCGCAAGCTCTAC
GGGAAGATAGAGGAACAGATAGAGCCGCCGCAGGTCCTGACGTTCAACAT
CACAGCAAGTGAGCACCCCCTTGGAAATGCGCGTTTTTTGGTGATTTCGG
TTGAATTCGACGGCCGGCGCGGCCGGTCTGATTGCCTGGAGAGCCGTGCA
GTTTTTTTGTTTCCCGCCGGTACGCGCCTTTCCCTCCTCCTTAAGAACAG
ATTTCTTTGCGGCGTGGTAGAGTACGCGGCACGAGGCTGAAAACCGGGTT
CTCTGTGTGAAGTACTGCTTTAGATTGTTTCCTCCTGCCGTACTGATGTG
TGTATTGGGGGGAGCCCCGCCGCGTAGCGTATCCAGGCCAGTGCCCATGC
CACGCCTACGATTAATCGATGGTCCAGTTGTGTAGCTTGTTTTTCCTTCC
TCCTTCCACGCGTTATCCCCCCCTCTCTTTCCTCTGGTTGGCGCGGCGTC
ACCGAACACTACGAATTTTCTTCTTCGGCGCCAAGACAACAGCCACCCGG
AGGAAGAAGTAAGCGCCCACGTGATGATGACCGCTTAGACGCAGGCTTGC
TACGTCGGGTTCAAATGGTCACATGGCATTCTTGTACCGCATACATAGCT
CATCCTCCCCCCCCCCCCTCCCCGCTCGAACCATCCTACCCGCTTACCAC
GCCCCGTCGGGTTTCTATCATGAAATGGAAAACGGCGACGACTCCCCATG
GCAGACTTTTTCGTGGGCGACTTCGATGGGGAGAAATCGATCATCGTCTC
CACCTTGTCGTTGATGGGCGCGCGGAATCCTTACCTGGGCATCGCGTACA
TCGCCCTCGGGTCGTTGTCCCTGGCGATCGGCCTCGCGTTCCTAATAAAG
CACTACTCCGACCCGAGAAAGCTCGGGGATACCAGATTTTTGGTCTGGAA
GGACACCACTCTGTAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6285:8568..10333-

>mRNA_L-elsbetiae_contig6285.14908.1 ID=mRNA_L-elsbetiae_contig6285.14908.1|Name=mRNA_L-elsbetiae_contig6285.14908.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1164bp|location=Sequence derived from alignment at L-elsbetiae_contig6285:8568..10333- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCCGAGACGGGGATCTCGTGGAAGTCGGACCGCGAGACGCGCTTCAA
GCAGCCCCCCGGGTTCACCTTCGCAGAGTGCCCCCTGACCTCCACCTGCG
CCGGCTGCCTCGGCGACGGGCACGACAACTGCGGGGACTTCACGGACCCG
CAGACCTTGACGGAGTACAAGTTCTGGTACCCGGAGAATGCCAAGATGTC
CGAGACGGGGATCTCGTGGAAGTCGGACCGCGAGACGCGCTTCAAGCAGC
CCCCCGGGTTCACCTTCGCAGAGTGCCCCCTGACCTCCACCTGCGCCGGC
TGCCTCGGCGACGGGCACGACAACTGCGGGGACTTCACGGACCCGCAGAC
CTTGACGGAGTACAAGTTCTGGTACCCGGAGAATGCCAAGACGCAGTACC
TGTACGAGACGTACCCGGAGGTGGTGAGCCCGATCGAGGGTGTCCTGAAC
GAGCACTTCATCGTGTGGATGCGCACGGCGGGGCTGCCGCGGTTCCGCAA
GCTCTACGGGAAGATAGAGGAACAGATAGAGCCGCCGCAGGTCCTGACGT
TCAACATCACAGCAAACGCAGTACCTGTACGAGACGTACCCGGAGGTGGT
GAGCCCGATCGAGGGTGTCCTGAACGAGCACTTCATCGTGTGGATGCGCA
CGGCGGGGCTGCCGCGGTTCCGCAAGCTCTACGGGAAGATAGAGGAACAG
ATAGAGCCGCCGCAGGTCCTGACGTTCAACATCACAGCAAACTTTTTCGT
GGGCGACTTCGATGGGGAGAAATCGATCATCGTCTCCACCTTGTCGTTGA
TGGGCGCGCGGAATCCTTACCTGGGCATCGCGTACATCGCCCTCGGGTCG
TTGTCCCTGGCGATCGGCCTCGCGTTCCTAATAAAGCACTACTCCGACCC
GAGAAAGCTCGGGGATACCAGATTTTTGGTCTGGAAGGACACCACTCTGT
AGACTTTTTCGTGGGCGACTTCGATGGGGAGAAATCGATCATCGTCTCCA
CCTTGTCGTTGATGGGCGCGCGGAATCCTTACCTGGGCATCGCGTACATC
GCCCTCGGGTCGTTGTCCCTGGCGATCGGCCTCGCGTTCCTAATAAAGCA
CTACTCCGACCCGAGAAAGCTCGGGGATACCAGATTTTTGGTCTGGAAGG
ACACCACTCTGTAG
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