mRNA_L-elsbetiae_contig6237.14832.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6237.14832.1 vs. uniprot
Match: D7FT02_ECTSI (Serine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT02_ECTSI) HSP 1 Score: 110 bits (276), Expect = 2.020e-24 Identity = 63/93 (67.74%), Postives = 69/93 (74.19%), Query Frame = 1 Query: 328 QSRGMEV--GGRRRG-----FTYMLNSKLSSATCTMSYILENYQTSAGVTVPEALVPYMGGLTFLDYAKELPKGKREAKDAIKEGCATSPKKP 585 QSRGMEV G ++ G F +MLNS L + T TMS ILENYQT GVTVPE LVP+MGG+TFLDY KELPKGKREAK A K G ATS KKP Sbjct: 365 QSRGMEVRSGHKKMGQVEKKFVHMLNSTLCATTRTMSCILENYQTPTGVTVPEVLVPFMGGITFLDYVKELPKGKREAKGATKGGYATSAKKP 457
BLAST of mRNA_L-elsbetiae_contig6237.14832.1 vs. uniprot
Match: A0A7R9U3G3_9STRA (Serine--tRNA ligase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3G3_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 2.290e-10 Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 1 Query: 328 QSRGMEV-------GGRRRGFTYMLNSKLSSATCTMSYILENYQTSAGVTVPEALVPYMGGLTFLDYAK 513 QSR MEV G R + + +MLNS L++AT T+ ILENYQ +GV VP+AL+P+MGG+TFL + + Sbjct: 377 QSRAMEVRCGTKKDGQREKKYVHMLNSTLAAATRTLCIILENYQDGSGVRVPDALIPFMGGMTFLPFVR 445
BLAST of mRNA_L-elsbetiae_contig6237.14832.1 vs. uniprot
Match: A0A7S1XJ27_9STRA (Serine--tRNA ligase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJ27_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 5.280e-10 Identity = 35/69 (50.72%), Postives = 47/69 (68.12%), Query Frame = 1 Query: 328 QSRGMEV-------GGRRRGFTYMLNSKLSSATCTMSYILENYQTSAGVTVPEALVPYMGGLTFLDYAK 513 QSR MEV G R + + +MLNS L++AT T+ ILENYQ + GV VPE LVP+MGG+TF+ + + Sbjct: 345 QSRAMEVRCGAKKDGQREKKYVHMLNSTLAAATRTICIILENYQEAGGVRVPEVLVPFMGGMTFMPFVR 413
BLAST of mRNA_L-elsbetiae_contig6237.14832.1 vs. uniprot
Match: A0A196SFB0_BLAHN (Seryl-tRNA synthetase (Fragment) n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SFB0_BLAHN) HSP 1 Score: 64.7 bits (156), Expect = 1.050e-9 Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 1 Query: 328 QSRGMEV-------GGRRRGFTYMLNSKLSSATCTMSYILENYQTSAGVTVPEALVPYMGGLTFLDYAKELPKGKREAKD 546 QSR ME+ + + + +MLNS L + T T+ ILENYQT G+ +PE L+PYM G+TFL + + +P+ +A++ Sbjct: 56 QSRAMEIRCGATKKNEKEKKYVHMLNSTLCALTRTLCCILENYQTPEGIQIPEKLLPYMDGITFLPFKRPIPQAMLKARE 135
BLAST of mRNA_L-elsbetiae_contig6237.14832.1 vs. uniprot
Match: A0A7S2V1X7_9STRA (Serine--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1X7_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 3.150e-9 Identity = 38/83 (45.78%), Postives = 53/83 (63.86%), Query Frame = 1 Query: 328 QSRGMEV-------GGRRRGFTYMLNSKLSSATCTMSYILENYQTSAGVTVPEALVPYMGGLTFLDYAKELP---KGKREAKD 546 Q+R MEV G + + + +MLNS L + T T+S I+ENYQT+ GV VPE LVP+ GG+TF + +EL KG++ KD Sbjct: 361 QARAMEVRCGTKKMGDKEKRYCHMLNSTLVATTRTISCIVENYQTTDGVRVPEVLVPFTGGVTFFPFVQELKGASKGEKGQKD 443
BLAST of mRNA_L-elsbetiae_contig6237.14832.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI) HSP 1 Score: 65.1 bits (157), Expect = 3.800e-9 Identity = 48/103 (46.60%), Postives = 57/103 (55.34%), Query Frame = 1 Query: 61 LLRQKKIGGVDAAEKQLRRLEAIRCLLLRVKAVHAVPWLW*VDAPSATKAASDTRKTAETTPASTTQLTLILPILRCRRRVA--LVASPLRQSRGMEVGGRRR 363 LLR+K + G A E+QL RL+AIR LLLRV AVHAV WLW DAPS A + P L+L LPIL+ R + VA+ LR S G RR Sbjct: 117 LLREKVVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSCGPEPRRP----PLSLTLPILKRRAKTCHVFVATLLRSSPISSGRGSRR 215
BLAST of mRNA_L-elsbetiae_contig6237.14832.1 vs. uniprot
Match: UPI0007116BD6 (serine-tRNA ligase n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI0007116BD6) HSP 1 Score: 66.2 bits (160), Expect = 4.180e-9 Identity = 34/80 (42.50%), Postives = 51/80 (63.75%), Query Frame = 1 Query: 328 QSRGMEV--GGRRRG-----FTYMLNSKLSSATCTMSYILENYQTSAGVTVPEALVPYMGGLTFLDYAKELPKGKREAKD 546 QSR ME+ G ++ + +MLNS L + T T+ ILENYQT G+ +PE L+PYM G+TFL + ++LP +A++ Sbjct: 368 QSRAMEIRCGSTKKANEDKRYVHMLNSTLCALTRTLCCILENYQTEDGIQIPEKLLPYMNGITFLPFTRDLPSDMMKARE 447
BLAST of mRNA_L-elsbetiae_contig6237.14832.1 vs. uniprot
Match: A0A5A8E5A5_CAFRO (Serine--tRNA ligase n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E5A5_CAFRO) HSP 1 Score: 66.2 bits (160), Expect = 4.710e-9 Identity = 34/61 (55.74%), Postives = 40/61 (65.57%), Query Frame = 1 Query: 367 FTYMLNSKLSSATCTMSYILENYQTSAGVTVPEALVPYMGGLTFLDYAKELPKGKREAKDA 549 + +MLNS L + T T+ ILENYQT GV VPEALVPYMGG TFL + + PK K A Sbjct: 409 YAHMLNSTLCATTRTICAILENYQTPDGVKVPEALVPYMGGTTFLPFVRPKPKNINAEKSA 469
BLAST of mRNA_L-elsbetiae_contig6237.14832.1 vs. uniprot
Match: A0A662WSB7_9STRA (tRNA-synt_2b domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WSB7_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 4.810e-9 Identity = 33/71 (46.48%), Postives = 45/71 (63.38%), Query Frame = 1 Query: 328 QSRGMEV-------GGRRRGFTYMLNSKLSSATCTMSYILENYQTSAGVTVPEALVPYMGGLTFLDYAKEL 519 QSR ME+ R + + +MLNS L ++T T+ ILEN Q GV VPE LVP+MGG+TFL + +E+ Sbjct: 18 QSRAMEIRCGVKKENQREKKYVHMLNSTLCASTRTVCCILENCQDENGVKVPEVLVPFMGGVTFLPFTREV 88
BLAST of mRNA_L-elsbetiae_contig6237.14832.1 vs. uniprot
Match: A0A1Y1X240_9FUNG (Serine--tRNA ligase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1X240_9FUNG) HSP 1 Score: 65.9 bits (159), Expect = 5.600e-9 Identity = 34/73 (46.58%), Postives = 44/73 (60.27%), Query Frame = 1 Query: 328 QSRGMEV-------GGRRRGFTYMLNSKLSSATCTMSYILENYQTSAGVTVPEALVPYMGGLTFLDYAKELPK 525 QSR +E+ G R + + + LNS L + + ILENYQT G+ +PE LVPYMGG TFL + KE PK Sbjct: 370 QSRSLEIRCGMKKMGDREKKYVHCLNSTLCATERALCCILENYQTPEGLNIPEPLVPYMGGRTFLPFVKEAPK 442 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6237.14832.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6237.14832.1 >prot_L-elsbetiae_contig6237.14832.1 ID=prot_L-elsbetiae_contig6237.14832.1|Name=mRNA_L-elsbetiae_contig6237.14832.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=108bp MEVGGRRRGFTYMLNSKLSSATCTMSYILENYQTSAGVTVPEALVPYMGGback to top mRNA from alignment at L-elsbetiae_contig6237:3254..5055- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6237.14832.1 ID=mRNA_L-elsbetiae_contig6237.14832.1|Name=mRNA_L-elsbetiae_contig6237.14832.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1802bp|location=Sequence derived from alignment at L-elsbetiae_contig6237:3254..5055- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6237:3254..5055- >mRNA_L-elsbetiae_contig6237.14832.1 ID=mRNA_L-elsbetiae_contig6237.14832.1|Name=mRNA_L-elsbetiae_contig6237.14832.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=648bp|location=Sequence derived from alignment at L-elsbetiae_contig6237:3254..5055- (Laminarionema elsbetiae ELsaHSoW15)back to top |