mRNA_L-elsbetiae_contig6230.14827.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6230.14827.1
Unique NamemRNA_L-elsbetiae_contig6230.14827.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig6230.14827.1 vs. uniprot
Match: A0A6H5K1F0_9PHAE (IPPc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1F0_9PHAE)

HSP 1 Score: 419 bits (1077), Expect = 3.350e-137
Identity = 212/271 (78.23%), Postives = 230/271 (84.87%), Query Frame = 3 
Query:  324 MRSFRVRRQESQWGLDDDEG-----WGFAGDAASAGVSARGRREESLRGITMPAAATRELPGGRLVNEDAVYNMRKRWISDRLIEREGNFCRYSSATVFCGTYNVAGKKSEGEDLGPWLKQCTGDPDIYAIGFQEIVDLNAVNVAVSDSKSQQRAGQWRQELERFLFTKSSRYSLVEHRSLVGIAMFVYVKEKHIKDRAVKDVQATTARVGMMGVMGNKGAVVVRLSLYDSTLCFVCAHMAAKRANIQGRNADFASILAKTAFTGDPETAW 1121
            M+SFR  RQESQW LD+D G      G +    S       RR ++LR ITMP +  REL GGR+VNE+A+YNMRKRWISDRL+EREGNFCRY S TVFCGTYNVAGKKSEGEDLGPWLKQCTG+PDIYA+GFQEIVDLNAVNVAVSDSKSQQRA  WRQELE+FL TK SRY+LVEHRSLVGI +FVYV+E HI+D AVKDVQATTARVGMMGVMGNKGAVVVRLSLYDSTLCFVCAHMAAKRAN+ GRNADF SIL KTAF GDPETAW
Sbjct:    1 MKSFRAWRQESQWQLDEDGGECDVPTGGSSRHVSREAGGGMRRGDTLRSITMPTSDDRELSGGRVVNEEAIYNMRKRWISDRLMEREGNFCRYPSVTVFCGTYNVAGKKSEGEDLGPWLKQCTGEPDIYALGFQEIVDLNAVNVAVSDSKSQQRAAIWRQELEKFLSTKRSRYTLVEHRSLVGIVLFVYVRENHIQDGAVKDVQATTARVGMMGVMGNKGAVVVRLSLYDSTLCFVCAHMAAKRANVLGRNADFWSILNKTAFVGDPETAW 271
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BLAST of mRNA_L-elsbetiae_contig6230.14827.1 vs. uniprot
Match: A0A836C9N6_9STRA (Inositol 5-phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9N6_9STRA)

HSP 1 Score: 216 bits (550), Expect = 2.160e-60
Identity = 116/237 (48.95%), Postives = 157/237 (66.24%), Query Frame = 3 
Query:  426 RGRREESLRGITMPAAATR-ELPGGRLVNEDAVYNMRKRWISDRLIEREGNFCRYSSATVFCGTYNVAGKKSEGEDLGPWL----KQCTGDPDIYAIGFQEIVDLNAVNVAVSDSKSQQRAGQWRQELERFLFTKSSRYSLVEHRSLVGIAMFVYVKEKHIKDRAVKDVQATTARVGMMGVMGNKGAVVVRLSLYDSTLCFVCAHMAAKRANIQGRNADFASILAKTAFTGDPETAW 1121
            RG R  S+     P+A  + EL  GR +N+ A++ +R+ +IS++L ER+  F R     +FCGT+NV GKK  G D+G WL    K    DPDIYAIGFQEIVDLNAVNVAV+++ SQQR+  WR  ++++L T  S+Y LVEH  LVG+ + V+ KE++ + R +++++A+         MGNKG V +R  LYDSTLCFVCAH+AA R N+ GRNADF SIL K AF   P+  W
Sbjct:   37 RGPRRRSMTDTVQPSAECQVELQAGRSINQAAIWLIRRAYISNKLRERKEQFARSKPMNIFCGTFNVNGKKEAGADIGQWLRWKRKAGGSDPDIYAIGFQEIVDLNAVNVAVTNTNSQQRSLLWRAAIQQYLDTLESKYYLVEHLPLVGVMLCVFAKEEY-RSR-LRNIEASK--------MGNKGGVAIRFMLYDSTLCFVCAHLAAHRGNVLGRNADFNSILTKVAFRAPPDVEW 263
[Close]
BLAST of mRNA_L-elsbetiae_contig6230.14827.1 vs. uniprot
Match: A0A4D9D9A4_9STRA (Rho-GAP domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9A4_9STRA)

HSP 1 Score: 179 bits (454), Expect = 1.460e-46
Identity = 103/200 (51.50%), Postives = 130/200 (65.00%), Query Frame = 3 
Query:  516 AVYNMRKRWISDRLIEREGNFCRYSSATVFCGTYNVAGK---KSEGEDLGPWLKQCTGD-PDIYAIGFQEIVDLNAVNVAVSDSKSQQRAGQWRQELERFLFTK--SSRYSLVEHRSLVGIAMFVYVKEKHIKDRAVKDVQATTARVGMMGVMGNKGAVVVRLSLYDSTLCFVCAHMAAKRANIQGRNADFASILAKTAF 1097
            AV  +R+ WI  +L +RE  F  Y + TVFCGTYNV  K     E + L  WL    G+  DI+A+GFQE+VDLNAVNVA+ D KSQQRA  W+ +L+  L  K    RY LV  R LVGI + V+VK  H K   V++V   +  VG+MG+ GNKG V +RL  YDS LCFVCAH+AA R N++GRN+DF +IL KT F
Sbjct:   21 AVSIIRQHWIDRQLKKRELEFTEYRTVTVFCGTYNVNAKIIADEEVQRLEEWLFPDAGELADIFAVGFQEVVDLNAVNVAM-DGKSQQRAQAWQDKLDAVLNNKRREERYVLVAERHLVGILLLVFVKGVHSKK--VREVYGASVGVGLMGMAGNKGGVSMRLKFYDSYLCFVCAHLAAHRENVEGRNSDFTNILQKTIF 217
[Close]
BLAST of mRNA_L-elsbetiae_contig6230.14827.1 vs. uniprot
Match: A0A1Z5J5Y0_FISSO (Inositol polyphosphate 5-phosphatase INPP5B/F n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J5Y0_FISSO)

HSP 1 Score: 176 bits (447), Expect = 1.080e-45
Identity = 102/224 (45.54%), Postives = 139/224 (62.05%), Query Frame = 3 
Query:  456 ITMPAAATRELPGGRLVNEDAVYNMRKRWISDRLIEREGNFCRYSSATVFCGTYNVAGKKSEGEDLGPWLKQCT-----GDPDIYAIGFQEIVDLNAVNVAVSDSKSQQRAGQWRQELERFLFTKSS-----RYSLVEHRSLVGIAMFVYVKEKHIKDRAVKDVQATTARVGMMGVMGNKGAVVVRLSLYDSTLCFVCAHMAAKRANIQGRNADFASILAKTAF 1097
            + +P     E   GR+ N++A+  +R  WI  ++  R+  F +Y  A VF GT+NV  K  E E L  WL  C      G PD+ A+GFQEIVDLNAVNVAV D+K+QQR+  W + L   L   ++     RY LV  +S+VG+ + V+V+  H     V+ VQ +   VG+MG+MGNKG V VRL  YDS+LCFVC+H+AA R N+ GRNADFA++ +KT F
Sbjct:   14 VLVPLQPDEETEDGRVRNKEAIAKIRDIWIYSKVRARQEEFTQYRKALVFTGTWNVNAKGKEVEPLDEWL--CADWTSQGLPDLVAVGFQEIVDLNAVNVAV-DNKTQQRSQFWTERLNFTLNQHANQDPQRRYVLVAQKSMVGLLICVFVRFPHYPK--VQYVQTSQVGVGVMGMMGNKGGVSVRLQFYDSSLCFVCSHLAAHRENVTGRNADFANVFSKTTF 232
[Close]
BLAST of mRNA_L-elsbetiae_contig6230.14827.1 vs. uniprot
Match: A0A5D6XQQ9_9STRA (Rho-GAP domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQQ9_9STRA)

HSP 1 Score: 173 bits (438), Expect = 2.450e-44
Identity = 101/230 (43.91%), Postives = 135/230 (58.70%), Query Frame = 3 
Query:  459 TMPAAATRELPGGRLVNEDAVYNMRKRWISDRLIEREGNFCRYSSATVFCGTYNVAGKKSEGED---LGPWLKQCTGD----PDIYAIGFQEIVDLNAVNVAVSDSKSQQRAGQWRQELERFLFTKS--SRYSLVEHRSLVGIAMFVYVKEKHIKDRAVKDVQATTARVGMMGVMGNKGAVVVRLSLYDSTLCFVCAHMAAKRANIQGRNADFASILAKTAFTGDPETAW 1121
            T+  A T   P GR  N   +  +R  WI  +L  R+  +  +    V  GT+NV  KK   +D   L  WL   +G     PD+ A+G QEIVDLNAVNV V+ + S QR+  W + +   L + S   +Y +V  + LVGI + V+VK +H     ++DV+  TA VG+MGVMGNKG V VRL+LYDSTLCFVCAH+AA R N+ GRNAD+ SIL+K  F      +W
Sbjct:   16 TVDEALTAIAPSGRYYNPVVMSFIRDDWIQQQLHLRQAAYTAFQRTRVVAGTWNVNAKKPLADDAAKLLQWLLPPSGGAGLLPDVVALGLQEIVDLNAVNVVVNSTLSSQRSAAWEEAVLAALNSVSPAQQYKVVMEKHLVGILLLVFVKVEHAA--FIRDVRGATAGVGIMGVMGNKGGVAVRLNLYDSTLCFVCAHLAAHRENVAGRNADYLSILSKIEFRDSDSDSW 243
[Close]
BLAST of mRNA_L-elsbetiae_contig6230.14827.1 vs. uniprot
Match: A0A067C7H4_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067C7H4_SAPPC)

HSP 1 Score: 168 bits (426), Expect = 6.450e-43
Identity = 95/207 (45.89%), Postives = 125/207 (60.39%), Query Frame = 3 
Query:  495 GRLVNEDAVYNMRKRWISDRLIEREGNFCRYSSATVFCGTYNVAGKK----SEGEDLGPWLKQCTGDPDIYAIGFQEIVDLNAVNVAVSDSKSQQRAGQWRQELERFL--FTKSSRYSLVEHRSLVGIAMFVYVKEKHIKDRAVKDVQATTARVGMMGVMGNKGAVVVRLSLYDSTLCFVCAHMAAKRANIQGRNADFASILAKTAF 1097
            GR      +  +R  WI  R+ +R   +      +++ GT+NV  KK    +E   L PWL+     PD+ A+GFQEIVDLNAVNV V++  +  R+ QW + L   L     +  Y +V H+ LVGI + V+VK +H     V DV   TA VG+MGVMGNKG V VRL LYDSTLCFVC+H+AA   N+ GRNADFA+IL+K  F
Sbjct:   21 GRCYIPTVLSMLRDDWIHQRMRQRASEYMEEKEISLWAGTFNVNAKKPVSVAEAMKLLPWLQPTRSLPDVVAVGFQEIVDLNAVNVVVNNMTAT-RSQQWEESLSAALNGHMSNDAYDVVLHKHLVGILLIVFVKREHAP--FVSDVMGATAGVGIMGVMGNKGGVAVRLRLYDSTLCFVCSHLAAHTHNVSGRNADFANILSKIEF 224
[Close]
BLAST of mRNA_L-elsbetiae_contig6230.14827.1 vs. uniprot
Match: A0A7S2SHQ8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SHQ8_9STRA)

HSP 1 Score: 168 bits (426), Expect = 7.950e-43
Identity = 91/192 (47.40%), Postives = 130/192 (67.71%), Query Frame = 3 
Query:  528 MRKRWISDRLIEREGNFCRYSSATVFCGTYNVAGKKSEGE-DLGPWLKQCTGDPDIYAIGFQEIVDLNAVNVAVSDSKSQQRAGQWRQELERFLFTKSS-RYSLVEHRSLVGIAMFVYVKEKHIKDRAVKDVQATTARVGMMGVMGNKGAVVVRLSLYDSTLCFVCAHMAAKRANIQGRNADFASILAKTAF 1097
            +R+ W++ ++ +R   F       +FCGT+NV GKK + E DL  WL Q   +PDIY +GFQEIVDLNAVNV V+D KS++R+ +W + +E  L +    +YSLV  + LVGI + ++V+ +H++  A   V + T  VG+MG+MGNKG   +R+ L D+TLCFV AH+AA R N+ GRNADFA+I+ KT F
Sbjct:   23 IREEWVTRQMNDRSREFTELRDIKIFCGTWNVNGKKPDPEEDLALWL-QPEQNPDIYCLGFQEIVDLNAVNV-VADGKSKERSSKWSEVIETTLNSSPDVQYSLVHEKHLVGIMLCIFVRVEHMQHLA--SVASQTVGVGVMGMMGNKGGASIRMRLRDTTLCFVAAHLAAHRDNVAGRNADFANIIQKTVF 210
[Close]
BLAST of mRNA_L-elsbetiae_contig6230.14827.1 vs. uniprot
Match: A0A8K1CR49_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CR49_PYTOL)

HSP 1 Score: 169 bits (427), Expect = 1.030e-42
Identity = 105/237 (44.30%), Postives = 142/237 (59.92%), Query Frame = 3 
Query:  459 TMPAAATRELPGGRLVNEDAVYN------MRKRWISDRLIEREGNFCRYSSATVFCGTYNVAGKK----SEGEDLGPWLKQCTGD------PDIYAIGFQEIVDLNAVNVAVSDSKSQQRAGQWRQELERFLFTKSSR--YSLVEHRSLVGIAMFVYVKEKHIKDRAVKDVQATTARVGMMGVMGNKGAVVVRLSLYDSTLCFVCAHMAAKRANIQGRNADFASILAKTAFTGDPET 1115
            T+P   +++    R  + D  YN      +R  WI  +L  R+  +  Y    +  GT+NV  KK    SEG  L  WL+Q T +      PDI A+GFQEIVDLNAVNV VS+ +S QR+ QW + L   L    S+  Y L+  ++LVGI + V+V+  H+    V++V   TA VG+MG+MGNKG   VRLS YDSTLCFVCAH+AA R N+ GRNAD+A+IL+K  F  + E+
Sbjct:   36 TLPHGTSKQSIDSRAAS-DRYYNPVVMSFIRDDWIQQQLHLRQSEYTVYQKTHIVTGTWNVNAKKPIPPSEGAKLMQWLQQQTQNSSPRRLPDIVALGFQEIVDLNAVNVVVSN-QSGQRSSQWEEALLATLNQSLSQNEYKLLLSKNLVGILLVVFVRADHVD--YVREVHGATAGVGIMGMMGNKGGAAVRLSFYDSTLCFVCAHLAAHRENVTGRNADYANILSKIDFKDNDES 268
[Close]
BLAST of mRNA_L-elsbetiae_contig6230.14827.1 vs. uniprot
Match: A0A448Z3U5_9STRA (Rho-GAP domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z3U5_9STRA)

HSP 1 Score: 168 bits (425), Expect = 1.890e-42
Identity = 100/237 (42.19%), Postives = 140/237 (59.07%), Query Frame = 3 
Query:  432 RREESLRGITMPAAATRELPGGRLVNEDAVYNMRKRWISDRLIEREGNFCRYSSATVFCGTYNVAGKKSEGEDLGPWLKQCTGD-------PDIYAIGFQEIVDLNAVNVAVSDSKSQQRAGQWRQELERFLFTKSSR--------YSLVEHRSLVGIAMFVYVKEKHIKDRAVKDVQATTARVGMMGVMGNKGAVVVRLSLYDSTLCFVCAHMAAKRANIQGRNADFASILAKTAF 1097
            RR E+   + +      E   GR+ N +A+  +R  W+  ++ ER   F  Y  +T+F GT+NV  K  E E L  W+    GD       PDI  +GFQEIVDLNAVNVAV + K++QR   W  +L + L    ++        YSLV  RSLVG+ + ++VK +H + R  K V + +  VG+MG+MGNKG V VRL  YDS +CF+C+H+AA R N+ GRNADF ++L KT+F
Sbjct:  103 RRNEAANKVLVTRTPDEETEDGRIRNREAMAKIRDAWVYKQVRERAREFTEYRQSTIFVGTWNVNAKGKE-ESLREWI---CGDWMRHNLMPDIVVVGFQEIVDLNAVNVAVGN-KTEQRTQYWSDQLLQTLNPSHNQHGQPLAPQYSLVMQRSLVGLLICLFVKVQH-RPRC-KAVASDSVGVGVMGMMGNKGGVSVRLQFYDSNICFICSHLAAHRENVAGRNADFLNVLQKTSF 332
[Close]
BLAST of mRNA_L-elsbetiae_contig6230.14827.1 vs. uniprot
Match: K0SN67_THAOC (IPPc domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SN67_THAOC)

HSP 1 Score: 167 bits (423), Expect = 3.200e-42
Identity = 101/218 (46.33%), Postives = 133/218 (61.01%), Query Frame = 3 
Query:  483 ELPGGRLVNEDAVYNMRKRWISDRLIEREGNFCRYSSATVFCGTYNVAGKKSEGEDLGPWLK---QCTGDPDIYAIGFQEIVDLNAVNVAVSDSKSQQRAGQWRQELERFLFTKSSR----------YSLVEHRSLVGIAMFVYVKEKHIKDRAVKDVQATTARVGMMGVMGNKGAVVVRLSLYDSTLCFVCAHMAAKRANIQGRNADFASILAKTAF 1097
            E   GR+ N +A   +R  WI  ++  R   F +Y    VF GT+NV  K  + EDL  WL    Q  G PD+   GFQE+VDLNAVNVAV ++KSQQR+  W   ++R   T +SR          Y  +E + LVG+ + V+VK  H + R VK V + +  VG+MGVMGNKG V VRL  YDSTLCF+C H+AA R N+ GRNADFA++ +KT+F
Sbjct:  109 ETEDGRIRNREASTKIRDAWIYRQIRARSDEFTQYKQGRVFIGTWNVNAKGKD-EDLSSWLCADWQTHGPPDVVVAGFQEMVDLNAVNVAV-ENKSQQRSQFW---VDRIAATLNSRQNTLGDPMRTYVQLEAKYLVGLLVVVFVKAPH-RSR-VKYVHSNSVGVGVMGVMGNKGGVSVRLQFYDSTLCFICTHLAAHRENVAGRNADFANVYSKTSF 319
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6230.14827.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1F0_9PHAE3.350e-13778.23IPPc domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A836C9N6_9STRA2.160e-6048.95Inositol 5-phosphatase n=1 Tax=Tribonema minus Tax... [more]
A0A4D9D9A4_9STRA1.460e-4651.50Rho-GAP domain-containing protein n=4 Tax=Monodops... [more]
A0A1Z5J5Y0_FISSO1.080e-4545.54Inositol polyphosphate 5-phosphatase INPP5B/F n=2 ... [more]
A0A5D6XQQ9_9STRA2.450e-4443.91Rho-GAP domain-containing protein n=1 Tax=Pythium ... [more]
A0A067C7H4_SAPPC6.450e-4345.89Uncharacterized protein n=3 Tax=Saprolegnia TaxID=... [more]
A0A7S2SHQ8_9STRA7.950e-4347.40Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8K1CR49_PYTOL1.030e-4244.30Uncharacterized protein n=2 Tax=Pythium oligandrum... [more]
A0A448Z3U5_9STRA1.890e-4242.19Rho-GAP domain-containing protein n=1 Tax=Pseudo-n... [more]
K0SN67_THAOC3.200e-4246.33IPPc domain-containing protein n=1 Tax=Thalassiosi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6230contigL-elsbetiae_contig6230:258..6683 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score424.9
Seed ortholog evalue2.8e-116
Seed eggNOG ortholog2880.D7G6P2
KEGG rclassRC00078
KEGG koko:K01099,ko:K20279
KEGG ReactionR04404,R09827
KEGG Pathwayko00562,ko01100,ko04070,map00562,map01100,map04070
Hectar predicted targeting categoryother localisation
EggNOG free text desc.phosphatidylinositol dephosphorylation
EggNOG OGsCOG5411@1,KOG0565@2759
Ec32 ortholog descriptionEndonuclease/exonuclease/phosphatase
Ec32 orthologEc-26_000170.3
EC3.1.3.36
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04131
Exons5
Model size1121
Cds size798
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6230.14827.1prot_L-elsbetiae_contig6230.14827.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6230 258..6360 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816684.3864095-CDS-L-elsbetiae_contig6230:257..4581622816684.3864095-CDS-L-elsbetiae_contig6230:257..458Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6230 258..458 -
1691683738.3087125-CDS-L-elsbetiae_contig6230:257..4581691683738.3087125-CDS-L-elsbetiae_contig6230:257..458Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6230 258..458 -
1622816684.3983886-CDS-L-elsbetiae_contig6230:1295..14481622816684.3983886-CDS-L-elsbetiae_contig6230:1295..1448Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6230 1296..1448 -
1691683738.331444-CDS-L-elsbetiae_contig6230:1295..14481691683738.331444-CDS-L-elsbetiae_contig6230:1295..1448Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6230 1296..1448 -
1622816684.4166763-CDS-L-elsbetiae_contig6230:2042..21061622816684.4166763-CDS-L-elsbetiae_contig6230:2042..2106Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6230 2043..2106 -
1691683738.3444862-CDS-L-elsbetiae_contig6230:2042..21061691683738.3444862-CDS-L-elsbetiae_contig6230:2042..2106Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6230 2043..2106 -
1622816684.4293509-CDS-L-elsbetiae_contig6230:3076..32141622816684.4293509-CDS-L-elsbetiae_contig6230:3076..3214Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6230 3077..3214 -
1691683738.3562298-CDS-L-elsbetiae_contig6230:3076..32141691683738.3562298-CDS-L-elsbetiae_contig6230:3076..3214Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6230 3077..3214 -
1622816684.442513-CDS-L-elsbetiae_contig6230:6118..63601622816684.442513-CDS-L-elsbetiae_contig6230:6118..6360Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6230 6119..6360 -
1691683738.3667123-CDS-L-elsbetiae_contig6230:6118..63601691683738.3667123-CDS-L-elsbetiae_contig6230:6118..6360Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6230 6119..6360 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816684.4578393-UTR-L-elsbetiae_contig6230:6360..66831622816684.4578393-UTR-L-elsbetiae_contig6230:6360..6683Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6230 6361..6683 -
1691683738.3758938-UTR-L-elsbetiae_contig6230:6360..66831691683738.3758938-UTR-L-elsbetiae_contig6230:6360..6683Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig6230 6361..6683 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6230.14827.1

>prot_L-elsbetiae_contig6230.14827.1 ID=prot_L-elsbetiae_contig6230.14827.1|Name=mRNA_L-elsbetiae_contig6230.14827.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=266bp
MRSFRVRRQESQWGLDDDEGWGFAGDAASAGVSARGRREESLRGITMPAA
ATRELPGGRLVNEDAVYNMRKRWISDRLIEREGNFCRYSSATVFCGTYNV
AGKKSEGEDLGPWLKQCTGDPDIYAIGFQEIVDLNAVNVAVSDSKSQQRA
GQWRQELERFLFTKSSRYSLVEHRSLVGIAMFVYVKEKHIKDRAVKDVQA
TTARVGMMGVMGNKGAVVVRLSLYDSTLCFVCAHMAAKRANIQGRNADFA
SILAKTAFTGDPETAW
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mRNA from alignment at L-elsbetiae_contig6230:258..6683-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6230.14827.1 ID=mRNA_L-elsbetiae_contig6230.14827.1|Name=mRNA_L-elsbetiae_contig6230.14827.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6426bp|location=Sequence derived from alignment at L-elsbetiae_contig6230:258..6683- (Laminarionema elsbetiae ELsaHSoW15)
ATTTGGTATCTTGACTAGAGGCCCCCTGCGTGCAGTCAGTTCAGGGTCGT
GTAGGAAGAGCAACTAAACAAGGGCGCCCCACGACCTCACCTACATTCTT
GAGGAGCTGTCTGCCTTCGCCCTCGAGGTAAGAGGCACTTAATTTGGCTG
CACTCCTGTTGCGTGGAAGAGACGGAGAATTCTGCAAAAACGATTTTGGA
ACAAACGGCTTCCGAACGTGACTCGCTGCCGCTTGGCGTTGTGGGCTAGA
GGCGAGGCCCGCCATACTGCGAGGTACAAGTAGCCCGAGTAGCTGCAGTG
CACCACGGCGAATATTCTGTCCAATGAGATCGTTCCGTGTGCGACGCCAA
GAGAGCCAATGGGGGCTAGACGACGACGAAGGCTGGGGCTTCGCAGGGGA
TGCCGCGTCTGCCGGCGTTAGCGCTCGCGGGCGCCGTGAGGAGTCGTTAC
GGGGCATCACCATGCCGGCAGCTGCAACACGTGAGCTGCCTGGGGGTCGG
CTTGTCAACGAGGATGCCGTCTACAACATGCGCAAAAGATGGATCAGCGA
TCGCTTGATAGAGAGGTGAGGGTCGAGGCTGAGGGTGAGACGGCGACGGG
AAGGCGGTTGGTTCGATCACTTCGCCTGTGCGTATAAATAGATGAGTAGT
ACATACCAGCCATACCCATGGTTACAGGACCCGTGTGTCTGCCCCGAGGA
GAGTATCATAACCTCCTAAGCCCATTTCTGTGATGGTAAGGTGGAAAGTA
TGGATTGGCCAAGAGTGTGGTGTTGTGATGTAGTCTATCTAGTCTAGTCT
AGTTTAGTCATGACCCAGCAGTGCGGAGTGTTTCATCATGTTGAAGCACC
AACTGCATAATCCACCCCTGCTTGTAGTAGCTCCTTGAACATTGAGCATT
TACAGTTTGTTGGAAATGGGCACACTGCGGTTGACATGCAAATACTCCAG
GTTGTAGAAGTAGAGAGGCACAGACGGGAGGGAGGTCCTGGAAGTAGACG
GTTTTGTGAAGATTATTACATTACCGTCGGGTTGCTCTTTCCCCTGACAA
AAAACTCGCCCTGAAGGCAGGCGACCAACACAAAGTGCGCTCACTTACTT
GATATTATTCCTGCGGAACACACTAACTAGACAAATGCACCACGTGTATG
TGCCCAGTTGGCAGGTAATAGCCTTTCCAATCGAAAATCAGATGGATCGA
AAACCTTGACTCTTACGCAGCACTGGTTATCTCGGCATGTGTTCCACAAA
CTTGATTAATCCATTACGTGCGGGCCCATTTGGCAGTCAAGAGCTAGCGA
AGTAGCATCACACCTCCGACGAAAGCAGTAATATTTTACCTACGCCCATC
GAAAATCAGAGCAATCGACACGGCAGCAGTGTGAAAGGCCAGTTTGGTAC
TCATGAGGGAACCATTACTGTAATAAGTAAGTAGGTAGCAAATCCTCTTA
TTCTTGCGCCTCCTCCGCTGCCTCTATCTTGAGAATACCCTGCCACAAAC
CATAAATCTGGGAAATGCTTTTCTTCGTCGGCAATCATCCTCTGGTAGCT
GTGCAACCTATAAGCATGGCTTTGCAGTGCTTTCGCAAAAGTAAACTATA
AACTATCCCTGAGACGTCATTCCTGACTAGAACACAGAATAGCGGCAGAT
TTTTCACGGAGAATTATCCTCCGTGTAAATTTGTTTCACGGAGAATTATC
CTCCGTGCACGCGTGAATTTGTTCGTAGTCGTGTCCGAAATAGTTTACAA
ATTAGAACGGTCTGCTTGCTGTTTTTTGTATTGTAGGGTATAGGCAAAAA
CAGAACAGGAGCTTAGAAGACGGTCGGGCTTGAGTACGTCCGCCTGTCGT
AGATCCTGTATGCTGCTTCTAACTTTGAAATAAATCGCTCACACGATTAC
CTCGTTGCGTGAACATGATTACACATGGCATGCCCCTTCGCGGGTGATTG
TTATTGTAGGTACAACAGGCTCGTGCATTGAGCCGTTTTTTTTTATGGGA
ATGGCCTTCAGCAGGTGCAAGCTTGACGTCGTTTTCGGGAAGAAAGTAGA
AATTAACCGGCCTGCTCTCATTGGTGCCTGGTCGGCGAGAACCCGACGCG
GAACCCTCCGGCATCGTAGGCAGGTGTGGGAAGCCTTCGGCCCTCTGTTG
TAGAGGGGATAGAGTTATGTTTTACGTACGTCCTGTTGCGCCGCAGCCAT
CGGCGCGTGATGTGTGTGCCGGGCAGTTGCGCGCGAGTGATTTCCACTTA
ATATTACTCCTACTATCTTGCATTGATAGTACTGGCGAACGCAAGAGATA
CGGCACAGCTGTCGGCTGTGCTCCATTGCATCGTTCGCCTTTTTGCAAAG
CTGATCCGCCAGAAGACTGCCTGTAATGCCGATATGTGCCGTGTCGGGGA
TGGGTCATTCCGAGCTAGACCCTGAACCATCCGAAACTTCCGATTTTATT
TCGAATTTCCAGTAGGGAGATTTGAGACAGCATTGTCGTCGGCAGTTAGC
TGGTGCCATCTTGCCTCTCTCTCTATCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTTGCCCTCTCTCTCTTGCCCTCT
CTTTCCTCCATGGGTTTGGTTGTCTCGCTGACACCATGTTGCTGTCTACC
TGTACCGCGGAGAAGAGACAACGTTATTTTTGCAACGGGTTGAGCGAGTG
AAGAGTTGCAGGCCCCGAATTCGATCGCGTTGCTGCGGCGTGGTGTTTAA
CACACACGGCGTAGGGGTGTGCACATGGCACACGTCGAAACCTCGGTCAG
GCCCACCGTCTCTGCTTAAACTCCCGCCGTAGGCTAAGGCGTGTTGATGG
TGGTATCCAGACCTCCAGACCTCCGGTGTTGTTGAAGTCTCAACACTTGA
CAACCCTCCGTTGAACCTGCAGTACCCCGCGAGTAGCGATTTCCCTGAAG
TCAACACACTAGATACATACGTCTGTTTTCAGGTTCAAGTGTTCAAGGTG
CTGATACATGCACGCCGCAGAGCATCCACCGTGTTTGTGCCCTACAATAT
CCTATGTTCCAATTTTTTTGAAGAGAAATATGGCGAAATAAAAAATGGAA
CCTAACCCACATTGAGACGGGACTCCGTGAGATTCAATCGGTATTCCATA
TGGTGACGTAATATTGTTATTCAGCTTTGGTTACATTTTCCGTTTCCGTT
TCGTCCTCGGTGGTTGGCTTTTTTTTTCTGTTTTGCGTTCGTGTGTTGAC
GGCATGCCTCGCCGGCGATGCCAACGATCCGTCGACTGTCGTAACCCATC
ACATCACCTCACTTCTCTTCGACTCGTGAACGATGACTCATGGGCGATGA
CTCGTGGACGATACCATCATGGTACGACCGGCCGTGGTGGATTTCGTCTT
GGTCATCTTCGCCTACCACGCGATGGATGCCATGCGACGCGATGTACGTA
AACCGCGTTCGAATGGAAGGGAGGGCAACTTCTGCCGGTACTCGTCGGCG
ACGGTGTTTTGCGGCACATACAACGTGGCCGGCAAGAAATCGGAAGGGGA
AGACCTAGGCCCGTGGCTGAAGCAGTGCACAGGGGACCCCGACATCTATG
CTATAGGGTGAGTTAGAGGTGTATCTGGTGGCACGAGCGCTTTTACATAT
GCGCACGAGCTTTGCGATGTGATGGTATTTACGATACATGGTGGGCTTTG
TTCCAGTTTCCATTCGCAGCGCAGCCTATTTGCAGCAGGAGCATTTCGTG
TTTCTTGTGGTGGCGACGCAAGGAGTGTTAGTGTGTGTGGTGTATGGTGC
AGAAAAAAGTGTCGTTATGTTGGTATGCTGCGTAGATTACTGGGCGCTCG
GTGATTGGCGGCACTAATCTAAACTTAAGGCTTCAAACCACGCGTCCTCT
CTCGCGCCTGTGCGTGTGTATGGGCACTCGGCGACGGCCTCTTTTGAGAG
CCCCATCTGGCTTGGTTGTCCAGTGTTTGCCTGCTGAAAACACACCACAC
CATGCCGCCGATCGTGCATCCCTACGTTGGTGTAGAAGTATAAATATAGT
TCGAATTACTCCTTCACACCAAGCGCTATGATATTGCCAACGCCGTAGCC
TGCTGCTCAAAAAATGGTTATTTAATGCAACGCGCTCGCCGGGAGAGGTC
TGCTGTCTGATGTATGATGCCCTCAACGTGTCTCTCACTCCCCTGGATAC
CACGATACTACGGACGGCGGTGCTCGTCGCCGAATTTGCGAAAATTCCTG
GAAAATTATTCCAGTACTCCGTATTTGTTTTCTGTTGGGCGGACGATTTG
CTGCGTCGCATATGAACGTACTTGGCAGGGGGGAGTTCTGTTGTGCTAAT
TGAACTCCTTTGTTGTGTTTCGCGGGCTATTTTCCGTTGCTACAATACTG
CTGTGCGGTTGTTGTTGTTGTTGCTGCTGTTTTCGGCTGTTTTTCTTATT
GTTGCTTCCTGGAGTGCTATTTATTGCGTGCTTGTGGTGACCTTTCCCTC
CCCCGTATTGTTGTTGTTGTTGTTGTTTCTGCTGCCGTGTTGTCTTGTTG
GCACTCATTTGTGACACGTACCTCAAGCTTTCAGGAGATCGTGGACTTGA
ACGCGGTGAACGTGGCGGTTTCGGATAGCAAGAGCCAACAGGTTTGTAAT
TGTGTATCGTACCGAATAAGCTAGGAGTGCAGGGGGTTGCTGAGGTGCCT
CATGCCCGTCCACTTCGCCTGTTGGTTTCTTGATGAGCACCTATGTGTGA
GCATACCTGAAATATCAAAGGCCCGCCCGCGTCTTCCTACTGCTGCTGAT
ACTTCAATACTGATATCATAGTCGCTGTGTCTTTCATGCTGCCTATGTCA
GGTTACTTTGGTTTTCTAGCGAGATTTGGCGGCGTCTCGCCCCTGTCGTA
GACTTGGCAAGACTGACTATTCAGTTAGGGGCCTTTGAGGCACGACTGCA
AGCTCCGCTGGTTTGTGTGAAAACATTAAAATATTCCACGTCATGGTGAT
GGGTAGCGTGATGGTGAGGGGACCAGCGCTACCACTCTGCTGTAGTGGTA
CAGTGTTTGAGACTCTCTTTTTTAGTTTTTCGCGGTGCACACTGTGGTGG
TATAGGGGGAACGTGAGATGTGGGTTGTGCTGTGCTCTGGACTCTTTGGC
TTGACCGCTATGCTGCGTCGTCGAGTCCTCGCAGCGGTCGTGCGTCCAAT
CGTCTTGAATCATCGATTTGCTGTTGTTGCCGCAGCGAGCGGGGCAATGG
CGGCAAGAGCTGGAGCGTTTTCTGTTCACGAAGAGTTCTCGCTACAGCCT
CGTGGAGCACCGCAGCCTTGTCGGCATCGCCATGTTCGTCTACGTCAAAG
AGAAGCACATCAAAGACAGAGCCGTGAAGGACGTTCAGGTAACCGGCTAT
TGACGTTGCGTGGCCCATGGGTGGGTATCGCCACAGTAGTTACGCTCATA
GCAGTAGCCTGGCCGCGTGGCACTGGCCTTTCAATCTCCCTGTCGGTGTG
TGGTTGTTGTTGCGGGTGGTGTTATGCGACTGATGTCTGGTTGCTGTGGC
GTCCCCTGCAGTGGCCTTGGTGATGGATCGATGGGTCTCACAATCCGTGA
CGCCTTCGACGTGACGTAATGTTGGTTTATTCATACTCCTATGTCGTACG
GCAGCTGAGTTCGCTTGGGGGCTTGATGGCCTCTCTGCCGACTTTGATCC
CTAAATGGCGTTACAGCCTTACAACCGTTGCCGAGAAGTCAATTGATGTC
AGGTCCATCTCTAAACAAAGCCACAAAGCGTCCTTGAACAGATACATTAA
AATGACAAAAATAAATGTGTTTTGTTTTCAAGCTCGCATCCAACTCAAAG
GGTTGACTTGGTGATGTATGTGACTGTGATGTTGATGTTGATATGCTGTT
GGGGTGTGTTGTGGATGTGGTGCCATATTGTATGTGTACGTATGTTGTCT
TCACATTAAAAACCGTTCCGATCTCTCCATCCAGTACCTCTCAATGTCCG
TACCACTCCAACCCTTGATGCGGTCAATTCCCGTGGTCACAGGCTAACTT
ATACCTAAGAAAAGGTACACGAACAATAAAATGGACCCGAAGGGCCAGCA
AAGCAACAATAGAACAGATATCGGATCTGGAGCCCTCCGCTCCCCTATAC
GCGCTATGTGAGGTAAAAACAAAACTGGAACACAGCCAACACCACTATTG
TCGGTTGTTTTTCCCAACACACCAGGCGACAACGGCGCGGGTGGGGATGA
TGGGAGTCATGGGCAACAAGGGGGCGGTGGTAGTGCGGCTCTCGCTGTAC
GACAGCACTCTCTGCTTCGTTTGCGCGCACATGGCGGCCAAGAGGGCTAA
CATTCAGGGCAGGAACGCCGACTTTGCGAGCATTTTGGCCAAAACGGCCT
TCACGGGGGACCCGGAAACGGCGTGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig6230:258..6683-

>mRNA_L-elsbetiae_contig6230.14827.1 ID=mRNA_L-elsbetiae_contig6230.14827.1|Name=mRNA_L-elsbetiae_contig6230.14827.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1596bp|location=Sequence derived from alignment at L-elsbetiae_contig6230:258..6683- (Laminarionema elsbetiae ELsaHSoW15)
ATGAGATCGTTCCGTGTGCGACGCCAAGAGAGCCAATGGGGGCTAGACGA
CGACGAAGGCTGGGGCTTCGCAGGGGATGCCGCGTCTGCCGGCGTTAGCG
CTCGCGGGCGCCGTGAGGAGTCGTTACGGGGCATCACCATGCCGGCAGCT
GCAACACGTGAGCTGCCTGGGGGTCGGCTTGTCAACGAGGATGCCGTCTA
CAACATGCGCAAAAGATGGATCAGCGATCGCTTGATAGAGAGATGAGATC
GTTCCGTGTGCGACGCCAAGAGAGCCAATGGGGGCTAGACGACGACGAAG
GCTGGGGCTTCGCAGGGGATGCCGCGTCTGCCGGCGTTAGCGCTCGCGGG
CGCCGTGAGGAGTCGTTACGGGGCATCACCATGCCGGCAGCTGCAACACG
TGAGCTGCCTGGGGGTCGGCTTGTCAACGAGGATGCCGTCTACAACATGC
GCAAAAGATGGATCAGCGATCGCTTGATAGAGAGGGAGGGCAACTTCTGC
CGGTACTCGTCGGCGACGGTGTTTTGCGGCACATACAACGTGGCCGGCAA
GAAATCGGAAGGGGAAGACCTAGGCCCGTGGCTGAAGCAGTGCACAGGGG
ACCCCGACATCTATGCTATAGGGGAGGGCAACTTCTGCCGGTACTCGTCG
GCGACGGTGTTTTGCGGCACATACAACGTGGCCGGCAAGAAATCGGAAGG
GGAAGACCTAGGCCCGTGGCTGAAGCAGTGCACAGGGGACCCCGACATCT
ATGCTATAGGCTTTCAGGAGATCGTGGACTTGAACGCGGTGAACGTGGCG
GTTTCGGATAGCAAGAGCCAACAGCTTTCAGGAGATCGTGGACTTGAACG
CGGTGAACGTGGCGGTTTCGGATAGCAAGAGCCAACAGCGAGCGGGGCAA
TGGCGGCAAGAGCTGGAGCGTTTTCTGTTCACGAAGAGTTCTCGCTACAG
CCTCGTGGAGCACCGCAGCCTTGTCGGCATCGCCATGTTCGTCTACGTCA
AAGAGAAGCACATCAAAGACAGAGCCGTGAAGGACGTTCAGCGAGCGGGG
CAATGGCGGCAAGAGCTGGAGCGTTTTCTGTTCACGAAGAGTTCTCGCTA
CAGCCTCGTGGAGCACCGCAGCCTTGTCGGCATCGCCATGTTCGTCTACG
TCAAAGAGAAGCACATCAAAGACAGAGCCGTGAAGGACGTTCAGGCGACA
ACGGCGCGGGTGGGGATGATGGGAGTCATGGGCAACAAGGGGGCGGTGGT
AGTGCGGCTCTCGCTGTACGACAGCACTCTCTGCTTCGTTTGCGCGCACA
TGGCGGCCAAGAGGGCTAACATTCAGGGCAGGAACGCCGACTTTGCGAGC
ATTTTGGCCAAAACGGCCTTCACGGGGGACCCGGAAACGGCGTGGGCGAC
AACGGCGCGGGTGGGGATGATGGGAGTCATGGGCAACAAGGGGGCGGTGG
TAGTGCGGCTCTCGCTGTACGACAGCACTCTCTGCTTCGTTTGCGCGCAC
ATGGCGGCCAAGAGGGCTAACATTCAGGGCAGGAACGCCGACTTTGCGAG
CATTTTGGCCAAAACGGCCTTCACGGGGGACCCGGAAACGGCGTGG
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