mRNA_L-elsbetiae_contig6223.14817.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6223.14817.1 vs. uniprot
Match: D8LTQ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTQ8_ECTSI) HSP 1 Score: 214 bits (544), Expect = 2.850e-58 Identity = 161/410 (39.27%), Postives = 215/410 (52.44%), Query Frame = 1 Query: 343 VLGANLSLRVKTHFKIGWDICAALDLAAYYEWTDIMEVLIQHGSDVNARGWRNLTALGKAAEGNKVDAIDVLIEAGAVIHGPAGFDSVLHVGVEVKAIQAIHALVRHGADPE*SDELHETPLLRAVGMRHLGTVTALLAAGVSPNASGTTDTLLYASVDEDLYSNCDQDIVQTLLAHGARVNALSSDGNTALHAAAEFANSHVVDIQVEAGATVCTPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAAIGREHLEDA---LELVNCLLLAGADETAMNDEGKTPASN-IPLEPSGHRAGDAIREKVHELLLRAPADRADRSWRRRGMVFLCHAFPEKAVRATGSRTTKLPRVAAVGGVAAATVGQDSIDGDDNFRGMVANLFSLREGKKELFRQII 1560 V GA+ S R + D AALD+A++Y +ME L++HG+D + R WRNLTAL KAAEGN+ +AIDVLI+AGAVI GPAGFDS + RHGAD + +E TPL RAV R+L V ALLAAG +PN SG ++T+L+AS+ ++ S D ++ LL GA+VNA + D +T LHAAA+ + V V GA V XXXXXX A+G E ++ LEL+ L+ AGAD+ A N + TP S + L DA E++H+ L+R+ W RRG++ CHA E+ V K+ RV G AA D+FRG+VANLFSLR G +E+FR I+ Sbjct: 255 VAGADTSCRAMAYLCEERDSFAALDIASFYGNVSMMETLLKHGADPSTRSWRNLTALHKAAEGNEAEAIDVLIKAGAVISGPAGFDSPVXXXXXXXXXXXXXXXXRHGADLDWHEEAGTTPLFRAVQWRYLEAVKALLAAGANPNISGNSETVLFASISSEI-SEIDWGVLLALLESGAKVNAANDDSDTPLHAAAKC-DPWAVHALVRLGAKVVPD--SNGRTPLHAACSFHNLETVAALLTHGPAINALDQXXXXXXXMAVGAEAGDNGGSKLELLEMLVAAGADQLAKNKDDDTPVSKALSLSRYDVENNDATFEQIHQYLVRS-------LWWRRGLLLACHARLEQEV-----GRNKVARVEEAGDAAA-----------DDFRGLVANLFSLRGGNEEIFRNIL 637
BLAST of mRNA_L-elsbetiae_contig6223.14817.1 vs. uniprot
Match: A0A6H5JN84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN84_9PHAE) HSP 1 Score: 100 bits (249), Expect = 1.470e-18 Identity = 126/416 (30.29%), Postives = 174/416 (41.83%), Query Frame = 1 Query: 397 DICAALDLAAYYEWTD-IMEVLIQHGSDVNARGWRNLTALGKAAEGNKVDAIDVLIEAGAVIHGPAGFDSVLHVGVEVKAIQAIHALVRHGADPE*SDELHETPLLRAVGMRHLGTVTALLAAGVSPNASGTTDTLLYASVDEDLYSNCDQDIVQTLLAHG----ARVNALSSDGNTALHAAAEFANSHVVDIQVEAGATVCTPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAAIGREHLEDALE-----------LVNCLLLAGADETAMNDEGKTPASNIPLEPSGHRAGDAIREKVHELLLRAPADRADRSWRRRGMVFLCHAFPEK----------------AVRA------TGSRTTKLPRVAAVGGVAAATVGQDSIDGDDNFRGMVANLFSLRE 1530 D AAL LA E D M++LIQHG+DVNAR TAL +AA NKVD ID+LI AGA+I P S + V +A++ + + G++ + LL G PN + ++ + + C + + LLA G A N + G TALH AAE N ++ + AGA XXXXXXXXXXXX A I HL A + ++ LL GADE A+N G+TP + HR A R V ++ P D+A WRRRG + LC A P + ++RA +GS +T +P V GGV ++ ++ I G +VA + L E Sbjct: 485 DGSAALSLATLSEHVDGTMKILIQHGADVNARNTNGFTALHRAAMYNKVDGIDLLISAGAIIEAPDNHKS---TPLAVTFREAVYRWKKE----------------HSCGLQDFAAMITLLKHGADPNIGNIQEGCPHSLLWYFVRCGCPISVFRELLAAGPNLDADTNVQTKRGKTALHMAAEDDNGVCIEALISAGAXX---------------------------------XXXXXXXXXXXXXATINPLHLAAARDQRDFGDSAVPTTIDLLLRWGADENAVNSAGRTPVTVWRRNGYVHRLPAASRTSVPKMFHWIPRDKA---WRRRGWLVLCRALPNRVRLKADDAGTCSGAGQSLRARRVGAGSGSCSTSVPPVGKAGGVPVGSLPREKIAG--GLSALVAKVVGLHE 843
BLAST of mRNA_L-elsbetiae_contig6223.14817.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 82.0 bits (201), Expect = 6.130e-13 Identity = 99/348 (28.45%), Postives = 141/348 (40.52%), Query Frame = 1 Query: 508 ALGKAAEGNKVDA-----IDVLIEAGAVIHGPAGFDSVLHVGVEVKAIQAIHALVRHGADPE*SDELHETPLLRAVGMRHLGTVTALLAAGVSPNASGTTDTLLYASVDEDLYSNCDQDIVQTLLAHGARVNALSSDGNTALHAAAEFANSHVVDIQVEAGATV-------CTPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAAIGREHLEDALELVNCLLLAGADETAMNDEGKTPASNIP--LEPSGHRAGDAIREKVHELLLRAPADRADRSWRRRGMVFLCHAF--PEKAVRATGSRTTKL-PRVAAVG-GVAAATVGQDSIDGDDNFR 1497 AL +A + VD I V+ + +++ LHV + L+ GA D TPL AV HL TV ALLAA + Y+ +D D +++ +L HG VN +DG T+LH AA +D+ VEAGA V CTP + A + + +V+ LL GADETA+N +G+T A + +E + E+V +LL APADRA WRRRG++ LC AF + +RA S + PR +V GV + G + + DD R Sbjct: 53 ALKEAVDSGHVDESAVKPILVMAKVASLLSESVDSSDQLHVSASQGQEVRVATLLAEGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVHYRIWNRSYSVLDFAAQKG-DACVLRAILQHGVDVNR-RTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPL--------IIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRA---WRRRGLLVLCRAFWIKSRRLRAASSSARGIGPRAMSVSIGVRVSVAGGELREDDDKGR 387
BLAST of mRNA_L-elsbetiae_contig6223.14817.1 vs. uniprot
Match: A0A6H5JN15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN15_9PHAE) HSP 1 Score: 80.1 bits (196), Expect = 4.520e-12 Identity = 110/404 (27.23%), Postives = 153/404 (37.87%), Query Frame = 1 Query: 265 ARTSRGVTPLMLATVENQAPAVEALCVLGANLSLRVKTHFKIGWDICAALDLAAYYEWT--DIMEVLIQHGSDVNARGWRNLTALGKAAEGNKVDAIDVLIEAGAVIHGPAGFDSVLHVGVEVKAIQ-------------AIHALVRHGADPE*SD-------------ELHETPLLRAVGMRHLGTVTALLAAGVSPNASGTTD---TLLYASVDEDLYSNCDQDIVQTLLAHGARVNALSSDGNTALHAAAEFANSHVVDIQVEAGATVCTPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAAIGREHLEDAL--ELVNCLLLAGADETAMNDEGKTPASNIPLEPSGHRAGDAIREKVHELLLRAPADRADRSWRRRGMVFLCHAFP 1377 A T++G TPL L A L GA++ + D AA LA ++ IM VLIQHG DVN + +AL +AA + +D IDVLI AGA+I S+ +A+ A+ AL++HGA P + E E P+ + LLA G PN D T L S D ++ LL HGA N + G TALH AAE N ++ AG + +A R D+ ++ LL GADE A++ G TP + S + A ++ V ++ RAP D+ WR+RG + LC AFP Sbjct: 404 ALTAKGRTPLGLTAEFGCEDATVVLLDAGADVKAPANSA-----DGSAAPSLATLNDFNADGIMNVLIQHGVDVNGKNNEEFSALHRAAYHDDIDCIDVLISAGAIIEATDNHKSMPLAVAFREAVDRGKGDNSGAGEFAAMIALLKHGAYPNIGNKGKGYSNYLLYYLERCECPIF---------VLRELLAVG--PNLDVRADDGYTPLTVSQDHP-------ELFTELLLHGADTNVQTKRGATALHKAAENNNGVCIEALTSAGTST------------------SIKDNDGRTPFQLATICHSRSVMRMLLRSAHDRCDSRDSAMATTIDLLLRWGADENAVDSLGNTPLTVWRENESTYTLSWANKQSVKKIFKRAPRDKR---WRQRGWLVLCRAFP 763
BLAST of mRNA_L-elsbetiae_contig6223.14817.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 79.0 bits (193), Expect = 5.300e-12 Identity = 89/309 (28.80%), Postives = 126/309 (40.78%), Query Frame = 1 Query: 538 VDAIDVLIEAGAVIHGPAGFDSVLHVGVEVKAIQAIHALVRHGADPE*SDELHETPLLRAVGMRHLGTVTALLAAGVSPNASGTTDTLLYASVDEDLYSNCDQDIVQTLLAHGARVNALSSDGNTALHAAAEFANSHVVDIQVEAGATV-------CTPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAAIGREHLEDALELVNCLLLAGADETAMNDEGKTPASNIP--LEPSGHRAGDAIREKVHELLLRAPADRADRSWRRRGMVFLCHAFPEKAVR---ATGSRTTKLPRV 1428 V+ I V+ + ++ + LHV + L+ GA D TPL AV HL TV ALLAA + Y+ +D D +++ +L HG VN +DG T+LH AA +D+ VEAGA V CTP + A + + +V+ LL GADETA+N +G+T A + +E + E+V +LL AP DRA WRRRG + LC AF KA R A+ + ++ PRV Sbjct: 19 VEPILVVAKVASLQYASVDSSDQLHVAASQGQEGRVATLLAGGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVRYRIWNRSYSVLDLAAQKG-DACVLRAILQHGVDVNR-RTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACINHCHEAALALYKHGSNIEARDIRGETPL--------IIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRA---WRRRGFLVLCRAFWIKARRLRAASSNASSNGPRV 314
BLAST of mRNA_L-elsbetiae_contig6223.14817.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI) HSP 1 Score: 68.2 bits (165), Expect = 1.210e-8 Identity = 91/186 (48.92%), Postives = 116/186 (62.37%), Query Frame = 1 Query: 832 SNCDQDIVQTLLAHGARVNALSSDGNTALHAAAEFANSHVVDIQVEAGATVCTPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAAIGREHLEDALELVNCLLLAGADETAMNDEGKTPASNIPLE--PSGHRAGDAIREKVHELLLRAPADRADRSWRRRGMVFLCHAFPEK 1383 S+ D +I++ L+ HG VN ++ G TALH AA+ ++ +D+ V AGA + M XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++++V LL GADET + +GKT A I PS D E+ LL RAPADRA WRRRG++ LCHA+P++ Sbjct: 179 SSQDVEILRMLIDHGMEVNLAAAFG-TALHWAAKANRANAIDVLVGAGADIQARNMSGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAADRIGTRRFPSTEPGDD---ERARSLLTRAPADRA---WRRRGLLVLCHAYPDR 357
BLAST of mRNA_L-elsbetiae_contig6223.14817.1 vs. uniprot
Match: A0A6H5JT48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT48_9PHAE) HSP 1 Score: 65.5 bits (158), Expect = 1.300e-7 Identity = 64/198 (32.32%), Postives = 91/198 (45.96%), Query Frame = 1 Query: 397 DICAALDLAAYYE-WTDIMEVLIQHGSDVNARGWRNLTALGKAAEGNKVDAIDVLIEAGAVIHGPAG-FDSVLHVGVEVKAIQAIHALVRHGADPE*SDELHETPLLRAVGMRHLGTVTALLAAGVSPNASGTTDTLLYASVDEDLYSNCDQDIVQTLLAHGARVNALSSDGNTALHAAAEFANSHVVDIQVEAGATV 984 + +AL LAA + ++M+ LI+HG DVNA TAL AA G+KV AID LIEAGA I+ G +D + ++ +H G + + L A H+ TV +LLAAG + + L S + D+ A+V+A S G TAL + V+D V AGA+V Sbjct: 141 EALSALGLAASSGGYVEVMQALIRHGVDVNAHDSNGCTALHSAAMGDKVGAIDTLIEAGANINVQRGKYD-------DARSTPPLHMASEKGYE-------RYSALRLATCSGHIATVKSLLAAGANVDLRPAA---LCKSAFDSACLGGHADVXXXXXXXXAKVDATDSCGRTALFDVSRENTVTVIDKVVAAGASV 321
BLAST of mRNA_L-elsbetiae_contig6223.14817.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI) HSP 1 Score: 63.2 bits (152), Expect = 5.040e-7 Identity = 37/87 (42.53%), Postives = 53/87 (60.92%), Query Frame = 1 Query: 1123 AAIGREHLEDALELVNCLLLAGADETAMNDEGKTPASNIPLEPSGHRAGDAIREKVHELLLRAPADRADRSWRRRGMVFLCHAFPEK 1383 AA+G+ H + ++V+ LL GADET ++ +G+T A +I HR E+ LL RAPADRA WRRRG++ LC A P++ Sbjct: 281 AAVGQRH--GSAQVVDLLLRWGADETIVSKQGETAADSIGTRRC-HRTDPEDDERARSLLARAPADRA---WRRRGLLVLCRAHPDR 361
BLAST of mRNA_L-elsbetiae_contig6223.14817.1 vs. uniprot
Match: A0A5N4ABP5_PHOPY (Uncharacterized protein n=2 Tax=Photinus pyralis TaxID=7054 RepID=A0A5N4ABP5_PHOPY) HSP 1 Score: 63.2 bits (152), Expect = 1.200e-6 Identity = 54/191 (28.27%), Postives = 87/191 (45.55%), Query Frame = 1 Query: 412 LDLAAYYEWTDIMEVLIQHGSDVNARGWRNLTALGKAAEGNKVDAIDVLIEAGAVIHGPA--GFDSVLHVGVEVKAIQAIHALVRHGADPE*SDELHETPLLRAVGMRHLGTVTALLAAGVSPNASGTTDTLLYASVDEDLYSNCDQDIVQTLLAHGARVNALSSDGNTALHAAAEFANSHVVDIQVEAGA 978 LDL + TD++++L+ G D+N R + + A A+D LI GA +H + +S LH V + + L+ G D + ETPL RA +H G + LL+ G S + + ++ + + D IV L+ G +NA++ DG+T L A N V + +E GA Sbjct: 2688 LDLVVHLNDTDVLDMLLAKGMDINYRLSESEPLIIAALREKCRKAVDYLIAKGADLHVVSYETGNSCLHYAVSAEYEDVTNLLLDEGLDINRENNERETPLRRACIDKHAGMIKLLLSRGASLDEGNFRFSYMHYAAELG-----DDAIVTDLIQKGVDLNAINRDGDTPLFLAVLCKNVSTVKLLLEHGA 2873
BLAST of mRNA_L-elsbetiae_contig6223.14817.1 vs. uniprot
Match: D7G744_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G744_ECTSI) HSP 1 Score: 61.6 bits (148), Expect = 2.530e-6 Identity = 69/209 (33.01%), Postives = 91/209 (43.54%), Query Frame = 1 Query: 406 AALDLAAYYEWTDIMEVLIQHGSDVNARGWRNLTAL----------GKAAEGNKVDAIDVLIEAGAVIHGPAG-FDSV----LHVGVEVKAIQAIHALVRHGADPE*SDELHETPLLR-AVGMRHLGTVTALLAAGVSPNASGTTDTLLYASVDEDLYSNCDQDIVQTLLAHGARVNALSSDGNTALHAAAEFANSHVVDIQVEAGATV 984 + L LAA ++M+ LI+HG+DVNA TAL AA G+KV AID LIEAGA I+ G +D LH+ + + +A +LV+H AD LR A H+ V LLAAG + N L S + S A V+A S G TAL + V+D V A A+V Sbjct: 127 STLGLAARGGHVEVMQALIRHGADVNAPDSNGCTALHTXXXXXXXXXSAAIGDKVGAIDTLIEAGANINVQGGKYDDARSTPLHMASKKGSSEAALSLVKHRADVHRLKGYERYSALRLAACSGHIAIVKTLLAAGANVNLRPAA---LCESALDSARSXXXXXXXXXXXXXXAIVDATDSRGRTALFNVSRENTVAVIDKLVAAWASV 332 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6223.14817.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6223.14817.1 >prot_L-elsbetiae_contig6223.14817.1 ID=prot_L-elsbetiae_contig6223.14817.1|Name=mRNA_L-elsbetiae_contig6223.14817.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=283bp MRHLGTVTALLAAGVSPNASGTTDTLLYASVDEDLYSNCDQDIVQTLLAHback to top mRNA from alignment at L-elsbetiae_contig6223:2532..4103+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6223.14817.1 ID=mRNA_L-elsbetiae_contig6223.14817.1|Name=mRNA_L-elsbetiae_contig6223.14817.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1572bp|location=Sequence derived from alignment at L-elsbetiae_contig6223:2532..4103+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6223:2532..4103+ >mRNA_L-elsbetiae_contig6223.14817.1 ID=mRNA_L-elsbetiae_contig6223.14817.1|Name=mRNA_L-elsbetiae_contig6223.14817.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1698bp|location=Sequence derived from alignment at L-elsbetiae_contig6223:2532..4103+ (Laminarionema elsbetiae ELsaHSoW15)back to top |