mRNA_L-elsbetiae_contig6221.14816.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig6221.14816.1 vs. uniprot
Match: D7FXL6_ECTSI (DNA-damage-inducible protein f, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXL6_ECTSI) HSP 1 Score: 441 bits (1133), Expect = 1.400e-147 Identity = 221/266 (83.08%), Postives = 246/266 (92.48%), Query Frame = 1 Query: 1 HPPVSSVLPHACAYVYIRALGFVAVTVSMVLQSYYLARKDIATPIKSVAGASVANLVLDCIAVFGFGMGIKGAALSTTVAQWVGLLYLVKEASFWPDLKRSGKVSFLPYRKEMKTFLQLGGPTCLALSGQVATCIAVTVAVGGCDTVALAAHQVVYGVFLLFCPIGEAVSQTVQTYLPGYTVKRAPNKDGTPRKTLTFGKSAVRMIKVISAVSFGLGMIDAVLAWLLTAGLPSLFTPDRAVWAVMRSVAPLCGLGLGLHGITMALQ 798 +P VSSVLPH+C+YVYIRA+GFVAVTVSMVLQS YLARKDIATPIKSVAGASVANLVLDC+AVFG GMGIKGAAL+TTVAQWVGL+YLVKE FWPDL++SG+VSF PYRKE+KTFLQLG PTCLALSGQVATC+AVTVA GCDTVALAAHQ++YGVFLLFCPIGEAVSQTVQTYLPGYTVKR P +DG PR+TLTFGKSAVRMIKVISAVS G+G ++ VL ++LTAGLP +FTPDRAVWA +R+VAPLCGL LGL+GITMA Q Sbjct: 466 NPAVSSVLPHSCSYVYIRAMGFVAVTVSMVLQSAYLARKDIATPIKSVAGASVANLVLDCVAVFGLGMGIKGAALATTVAQWVGLVYLVKE--FWPDLQKSGQVSFFPYRKELKTFLQLGAPTCLALSGQVATCVAVTVAASGCDTVALAAHQILYGVFLLFCPIGEAVSQTVQTYLPGYTVKRPPRRDGRPRRTLTFGKSAVRMIKVISAVSLGIGAVNTVLGYVLTAGLPWIFTPDRAVWAAVRNVAPLCGLSLGLYGITMAFQ 729
BLAST of mRNA_L-elsbetiae_contig6221.14816.1 vs. uniprot
Match: A0A6H5L6W0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6W0_9PHAE) HSP 1 Score: 439 bits (1128), Expect = 1.950e-146 Identity = 219/266 (82.33%), Postives = 245/266 (92.11%), Query Frame = 1 Query: 1 HPPVSSVLPHACAYVYIRALGFVAVTVSMVLQSYYLARKDIATPIKSVAGASVANLVLDCIAVFGFGMGIKGAALSTTVAQWVGLLYLVKEASFWPDLKRSGKVSFLPYRKEMKTFLQLGGPTCLALSGQVATCIAVTVAVGGCDTVALAAHQVVYGVFLLFCPIGEAVSQTVQTYLPGYTVKRAPNKDGTPRKTLTFGKSAVRMIKVISAVSFGLGMIDAVLAWLLTAGLPSLFTPDRAVWAVMRSVAPLCGLGLGLHGITMALQ 798 +P VSSVLPH+C+YVYIRA+GFVAVTVSMVLQS YLARKDIATPIKSVAGASVANLVLDC+AVFG GMGIKGAAL+TTVAQWVGL+YLVKE FWPDL++SG+VSF PYRKE+KTFLQLG PTCLALSGQVATC+AVTVA GCDTVALAAHQ++YGVFLLFCPIGEAVSQTVQTYLPGYTVKR P +DG PR+TLTFGKSAVRMIKVISAVS G+G ++ VL ++LTAGLP +FTPDRAVWA +R ++PLCGL LGL+GITMA Q Sbjct: 552 NPAVSSVLPHSCSYVYIRAMGFVAVTVSMVLQSAYLARKDIATPIKSVAGASVANLVLDCVAVFGLGMGIKGAALATTVAQWVGLVYLVKE--FWPDLQKSGQVSFFPYRKELKTFLQLGAPTCLALSGQVATCVAVTVAASGCDTVALAAHQILYGVFLLFCPIGEAVSQTVQTYLPGYTVKRPPRRDGRPRRTLTFGKSAVRMIKVISAVSLGIGAVNTVLGYVLTAGLPWIFTPDRAVWAAVRDISPLCGLSLGLYGITMAFQ 815
BLAST of mRNA_L-elsbetiae_contig6221.14816.1 vs. uniprot
Match: A0A8J2WS84_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WS84_9STRA) HSP 1 Score: 147 bits (371), Expect = 7.710e-37 Identity = 102/263 (38.78%), Postives = 148/263 (56.27%), Query Frame = 1 Query: 31 ACAYVYIRALGFVAVTVSMVLQSYYLARKDIATPIKSVAGASVANLVLDCIAVFGFGMGIKGAALSTTVAQWVGLLYLVKEASFWPDLKRSGKVSFLPYRKEMKTFLQLGGPTCLALSGQVATCIAVTVAVGGC-----DTVALAAHQVVYGVFLLFCPIGEAVSQTVQTYLPGYTVK-RAPNKDGTPRK-TLTFGKSAVRMIKVISAVSFGLGMIDAVLAWLLTAGLPSLFTPDRAVWAVMRSVAPLCGLGLGLHGITMALQ 798 A AY IR+L FV + MVLQS LAR+++ P+K+ + ANLV D I V MG+ GAAL+TT AQ V L+ L+++A+ L S K + G P ALS + A ++++ A D ALAAHQ++ G++ +F P+G+A+SQTVQT+LP V + D P+K + G + ++K A + LG +DAV+AW L AGLP+LF+ D AV A +R AP G L +HG++ A + Sbjct: 309 AVAYTRIRSLAFVPALLIMVLQSTSLARRNVRAPLKAAGLSGAANLVGDGILVP--TMGLAGAALATTAAQIVALIALLQDAAKGKFLPSSPKQWARSAGAPFRQIFTKGAPVVAALSAKTAVLLSLSYAAASTATKRGDLAALAAHQILVGLYFVFAPVGDALSQTVQTFLPRSIVADQLDEVDRPPQKRSKALGPKSRAVVKGAVAAALVLGGLDAVMAWGLPAGLPTLFSRDPAVAAALRRTAPYLGAALMVHGLSSATE 569
BLAST of mRNA_L-elsbetiae_contig6221.14816.1 vs. uniprot
Match: A0A8J2WR19_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WR19_9STRA) HSP 1 Score: 119 bits (297), Expect = 6.670e-27 Identity = 94/274 (34.31%), Postives = 139/274 (50.73%), Query Frame = 1 Query: 22 LPHACAYVYIRALGFVAVTVSMVLQSYYLARKDIATPIKSVAGASVANLVLDCIAVFGFGMGIKGAALSTTVAQWVGLLYLVK-EASFWPDLKRSGKVSFLPYRKEMKTFLQLGGPTCLALSGQVATCIAVTVAVGGCDTVALAAHQVVYGVFLLFCPIGEAVSQTVQTYLPGYTVKRAPNK--------DGTPRKT---LTFGKSAVRMIKVISAVSFGLGMIDAVLAWLLTAG---LPSLFTPDRAVWAVMRSVAPLCGLGLGLHGITMALQ 798 LP A +Y +RALGF A +++VLQS LAR+D+ TP+K+V ++ N V D + V G G+ GAA +T AQ V L++ EA L R + +FL LALS +++ ++V C T ALAA Q + G F +F P+G+A+ QT+Q LP A + D KT +AV +++ + + LG+IDA LA TAG P FT D V A +R AP+ G L +H ++++L+ Sbjct: 165 LPLAVSYTRVRALGFPAALLTVVLQSAALARRDVRTPLKAVWLGALVNGVGDYVLVARCGAGVAGAAAATVAAQCVAAGVLLRAEARAATTLPRR----LADRARSAWSFLIRCAAPALALSARLSVQLSVAATASACGTAALAAQQALSGTFQIFRPLGDALGQTMQALLPAVASNNAVSSLDSCLGLGDAAVVKTDGPQVLSTNAVAVLRAMIGGALALGLIDAALA---TAGPVLFPGAFTADALVAAEIRKTAPIVGACLFVHALSVSLE 431
BLAST of mRNA_L-elsbetiae_contig6221.14816.1 vs. uniprot
Match: A0A7S0ECV6_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0ECV6_9EUKA) HSP 1 Score: 113 bits (283), Expect = 7.510e-25 Identity = 91/269 (33.83%), Postives = 135/269 (50.19%), Query Frame = 1 Query: 19 VLPHACAYVYIRALGFVAVTVSMVLQSYYLARKDIATPIKSVAGASVANLVLDCIAVFGFGMGIKGAALSTTVAQWVGLLYLVKEASFWP----DLKRSGKVSFLPYRKEMKTFLQLGGPTCLALSGQVATCIAVTVAVGGCDTVALAAHQVVYGVFLLFCPIGEAVSQTVQTYLPGYTVKRAPNKDGTPRKTLTFGKSAVRMIKVISAVSFGLGMIDAVLAWLLTAGLPSLFTPDRAVWAVMRSVAPLCGLGL-------GLHGITMA 792 VL A Y IRALGF A +++VLQ+ +LA KD +P+ +V +++ NLVLD V G+G GAA T + +V L+ + W L + + LP R EM+ L P +AL +V+ +++T++ TVALA++QVV V+ LFCPIGEA+S +QTY+P +V A + G + S V + ++ + GL ++ P LFT AV M APL + GL GI +A Sbjct: 296 VLAAATEYTVIRALGFPAALLTLVLQAAFLASKDALSPLLAVPLSALTNLVLDLFLVGSLGLGTAGAAWGTVASLYVNGFTLL---AMWHVKARTLGEATPLFTLPSRAEMQKLLVFIVPMLVALCSRVSMGLSITLSATALGTVALASNQVVESVYWLFCPIGEAISLCMQTYMP--SVLAARRRAGAQMRATCERTSLVAAL--VAGAAAGLAVVIR----------PGLFTTSGAVAGSMAKTAPLLAASIFTFTRMCGLEGIMIA 547
BLAST of mRNA_L-elsbetiae_contig6221.14816.1 vs. uniprot
Match: A0A7S2RRL1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RRL1_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.710e-22 Identity = 76/239 (31.80%), Postives = 114/239 (47.70%), Query Frame = 1 Query: 109 ARKDIATPIKSVAGASVANLVLDCIAVFGFGMGIKGAALSTTVAQWVGLLYLVK---------EASFWPDLKRSGKVSFLPYRKEMKTFLQLGGPTCLALSGQVATCIAVTVAVGGCDTVALAAHQVVYGVFLLFCPIGEAVSQTVQTYLPGYTVKRAPNKDGTPRKTLTFGKSAVRMIKVISAVSFGLGMIDAVLAWLLTAGLPSLFTPDRAVWAVMRSVAPLCGLGLGLHGITMALQ 798 A + P+ +VA ++VAN + D + V G GMG GAA + AQ + L + EA R S + + F++ LAL G+ T + ++ V GC TVALAAHQV+ V LFCPIGEA+SQT Q+ LP N D L+ ++ +++ + + GLG+++A +A LL FT AV A M ++ P L H ++ L+ Sbjct: 1 ASPQVPLPLLAVALSAVANFIADLVLVIGLGMGASGAAWGSVAAQVAAFVVLARHEGKLRSHAEAGAGDAPTREHVRSLADRARGLSQFMRQCTSPALALLGKCTTLLFLSATVTGCGTVALAAHQVIQSVISLFCPIGEALSQTAQSLLP------VANHDAVAPGVLS--ETGAGLVRSLGFAAAGLGILNAGIAGLLPTKAAGAFTSSPAVSAQMAALLPFMVTCLTFHALSTTLE 231
BLAST of mRNA_L-elsbetiae_contig6221.14816.1 vs. uniprot
Match: A0A7S0G8B3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G8B3_9STRA) HSP 1 Score: 102 bits (254), Expect = 4.180e-21 Identity = 89/273 (32.60%), Postives = 128/273 (46.89%), Query Frame = 1 Query: 13 SSVLPHACAYVYIRALGFVAVTVSMVLQSYYLARKDIATPIKSVAGASVANLVLDCIAVFGFGMGIKGAALSTTVAQWVGLLYLV--------KEASFWPDLKRSGK---VSFLPYRKEMKTFLQLGGPTCLALSGQVATCIAVTVAVGGCDTVALAAHQVVYGVFLLFCPIGEAVSQTVQTYLPGYTVKRAPNKDGTPRKTLTFGKSAVRMIKVISAVSFGLGMIDAVLAWLLTAGLPSLFTPDRAVWAVMRSVAPLCGLGLGLHGITMALQ 798 +SV+P A Y IRA G V ++ V ++ LARKD P+ SVA AS+ N V V G+GI+GAA+ T VA +L+ K + D K K + LP R+ F P + G+ V +G +VALAAHQV+ F + P+G++V T Q +LP K +G P++ A R++ V VS G++ AVLA LL LFT D V A +R AP+ + +H I + + Sbjct: 185 ASVVPSALQYATIRAFGQPFVVMASVARAAALARKDTRGPLVSVALASLLNFVGTTSLVRLTGLGIRGAAIGTLVADIAATTFLLTRIRTSRTKRQNRIIDEKLHSKQVPLLVLPSRESFFRFGSYAAPIFFTILGKSVVYNGVGATIGRMGSVALAAHQVLLQSFFFWTPVGDSVGMTSQVFLPAILAKE--KAEGVPQR------GAKRLLFVTGMVS---GLVAAVLAALLPLKGAHLFTADLHVAAALRQTAPVLASCVAMHAIALTCE 446
BLAST of mRNA_L-elsbetiae_contig6221.14816.1 vs. uniprot
Match: A0A7S4B777_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B777_CHRCT) HSP 1 Score: 100 bits (249), Expect = 2.520e-20 Identity = 94/281 (33.45%), Postives = 132/281 (46.98%), Query Frame = 1 Query: 31 ACAYVYIRALGFVAVTVSMVLQSYYLARKDIATPIKSVAGASVANLVLDCIAVFGFGMGIKGAALSTTVAQWVG---LLYLVKE-------------ASFWP---------DLKRSGKVSFLPYRKEMKTFLQLGGPTCLALSGQVATCIAVTVAVGGCDTVALAAHQVVYGVFLLFCPIGEAVSQTVQTYLPGYTVKRAPNKDGTPRKTLTFGKSAVRMIKVISAVSFGLGMIDAVLAWLLTAGLPSLFTPDRAVWAVMRSVAPLCGLGLGLHGITMALQ 798 A Y IRALG+ A +MVLQ+ +LA KD +P+ ++ + ANL+ D I V MG GAA +T AQ+V LL L K A++ P + R +V +P +E T P LA+ + IA+ AV TV+LAAHQVV ++ LF P G+AVS +VQ +LP +KR+ + G +A+ + S + L G P LFT V AV+ VAPL G+ L + IT AL+ Sbjct: 272 AAQYTAIRALGYPAALTTMVLQAAFLASKDATSPLIALPLVAGANLLGDLILVGPMKMGAAGAAFATIAAQFVNAAVLLVLWKRKVVKGRITAAAVSAAYDPAADPDTVTDKVDRRVRVMTVPSPQEAVTLAAFIAPMMLAIGARSYMGIAMAAAVASLGTVSLAAHQVVECLYWLFSPFGDAVSLSVQAFLPTL-LKRSAVVSKRLQGLALRGAAALSVFAGASGAA-------------LLVGAPGLFTTSATVSAVLGQVAPLLGVSLVGYVITGALE 538
BLAST of mRNA_L-elsbetiae_contig6221.14816.1 vs. uniprot
Match: A0A835YQ91_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ91_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 2.910e-19 Identity = 83/291 (28.52%), Postives = 134/291 (46.05%), Query Frame = 1 Query: 13 SSVLPHACAYVYIRALGFVAVTVSMVLQSYYLARKDIATPIKSVAGASVANLVLDCIAVFGFGMGIKGAALSTTVAQWVGLLYLVKEASFWPDLKRSGKVSFLPYRKEMKTFLQLGGPTCLALSGQVATCIAVTVAV-GGCDTVALAAHQVVYGVFLLFCPIGEAVSQTVQTYLPGYTVK-RAP-----------------------NKDGTPRKTLTFGKSAVR----MIKVISAVSFGLGMIDAVLAWLLTAGLPSLFTPDRAVWAVMRSVAPLCGLGLGLHGITMALQ 798 +++ P A Y IR +G A SM+ Q+ L KD TP+ V N V D V GMGI+GAA++T+V++ +G+ L++ + + ++ +P R++ F+ GP + L ++ +TV V GG DTV LAAH + +F F G+++SQ Q +LPG RA N D + ++ V MI+ + ++ G+G+ A+ A L+ LP LFT D + MR + P+ L +H M L+ Sbjct: 95 AAIAPIALKYSNIRMIGAPACLASMIAQAACLGSKDSVTPLFVVLACGAFNAVGDVFLVRTMGMGIRGAAIATSVSEVIGMGLLMRAVARMQGPRVYPFIA-MPGRQDFWKFMTFAGPIFVTLLCKILFYSGMTVLVTGGGDTVMLAAHTCMLRIFFFFTTFGDSLSQAAQAFLPGMMASDRAAAAAHRKXXXXXXXXXXRGANLNFNGDAPSAQRRAPAQAPVSAGNLMIRKLLTLAAGIGVCMALSAGLVPLRLPHLFTNDALITDQMRRLVPVLSWSLLVHASVMGLE 384
BLAST of mRNA_L-elsbetiae_contig6221.14816.1 vs. uniprot
Match: A0A7S0IW58_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IW58_9EUKA) HSP 1 Score: 94.0 bits (232), Expect = 3.280e-18 Identity = 67/190 (35.26%), Postives = 99/190 (52.11%), Query Frame = 1 Query: 13 SSVLPHACAYVYIRALGFVAVTVSMVLQSYYLARKDIATPIKSVAGASVANLVLDCIAVFGFGMGIKGAALSTTVAQWVGLLYLVKEASFWPDLKRSGK----------------VSFLPYRKEMKTFLQLGGPTCLALSGQVATCIAVTVAVGGCDTVALAAHQVVYGVFLLFCPIGEAVSQTVQTYLP 534 +S + A Y IRA G+ A +MVLQ+ +LA KD +P+ ++ ++ANLV D + V GMG GAA +T +Q+V L+ + W +G+ + LP R+E ++ L P LA+ + IAV V TV+LAAHQVV ++ LF P G+AVS +VQ +LP Sbjct: 284 ASAIGSATQYTAIRAFGYPAALTTMVLQAAFLASKDAMSPLLTLPAVALANLVGDLVLVGPMGMGPAGAAWATIASQFVNAALLL---ALWKRKLATGRPEGCGSAAEGCGAGVPLLALPTRQEFRSLLVFIAPMMLAIGARSYMGIAVAATVATLGTVSLAAHQVVECLYWLFTPFGDAVSLSVQAFLP 470 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6221.14816.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6221.14816.1 >prot_L-elsbetiae_contig6221.14816.1 ID=prot_L-elsbetiae_contig6221.14816.1|Name=mRNA_L-elsbetiae_contig6221.14816.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=266bp HPPVSSVLPHACAYVYIRALGFVAVTVSMVLQSYYLARKDIATPIKSVAGback to top mRNA from alignment at L-elsbetiae_contig6221:283..11306- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig6221.14816.1 ID=mRNA_L-elsbetiae_contig6221.14816.1|Name=mRNA_L-elsbetiae_contig6221.14816.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=11024bp|location=Sequence derived from alignment at L-elsbetiae_contig6221:283..11306- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig6221:283..11306- >mRNA_L-elsbetiae_contig6221.14816.1 ID=mRNA_L-elsbetiae_contig6221.14816.1|Name=mRNA_L-elsbetiae_contig6221.14816.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1596bp|location=Sequence derived from alignment at L-elsbetiae_contig6221:283..11306- (Laminarionema elsbetiae ELsaHSoW15)back to top |