|
Homology
BLAST of mRNA_L-elsbetiae_contig6211.14803.1 vs. uniprot
Match: D8LQ01_ECTSI (Structural maintenance of chromosomes protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ01_ECTSI) HSP 1 Score: 300 bits (769), Expect = 1.080e-88 Identity = 228/330 (69.09%), Postives = 248/330 (75.15%), Query Frame = 1
Query: 40 TVEGEGERKKGDKSAKEAARKGKELEGVREKAKKAKDEFAGMEEKAFEVLQAFEAAEEDVKAKVEELREVADRYEKAKALADKIRSVEVDISLQLQEYTKKISDNKMKLEHWAGELKKLRKLHRKEAEHWGLEDDDTSXXXXXXXXXXXXXXXXXXXXMVDGSDEIEASVAEEERMDTGVEETKGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKRAAAGRGGVGLLEDLDAGELNGVDREDLKLKISEMEAEKTAKKETVNLPALEQYRKREREYHERGQELEEATVARKEAREHHETLRRQRLDEFMAGFGQITLRLKEMYQV 1029
TVEGEGERKKG+K AK+A RK KELE VREKA+KAKD FAGMEEKAFEVL+AFEAAE +V K EELRE+A+ YEKAK+LADKIR VEVDIS QLQEY K I++NK KL+HW GELKKLRK+H+KEAE WGLED+D XXXXX DE V GXX XXXXXXXXXXXXXXXXXXXXXXXXXX G VG+L DLDA E++ V REDLKLKISEMEAEK A + +VNLPALEQYRKRE EYH R QELEEATVARKEAREHHE LRRQRLDEFMAGFGQITLRLKEMYQ+
Sbjct: 948 TVEGEGERKKGEKVAKDADRKTKELEAVREKAQKAKDGFAGMEEKAFEVLKAFEAAEAEVNTKAEELREIAESYEKAKSLADKIRGVEVDISHQLQEYAKSINENKTKLKHWTGELKKLRKVHKKEAEDWGLEDEDEHEHGVSDXXXXXG-----------SEDERGEGVTXXXXXXXXXXXXXXGXXEEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG---VGVLPDLDAEEVDHVVREDLKLKISEMEAEKKAMESSVNLPALEQYRKREEEYHGRVQELEEATVARKEAREHHENLRRQRLDEFMAGFGQITLRLKEMYQM 1263
BLAST of mRNA_L-elsbetiae_contig6211.14803.1 vs. uniprot
Match: A0A835YML7_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YML7_9STRA) HSP 1 Score: 152 bits (385), Expect = 2.890e-37 Identity = 155/320 (48.44%), Postives = 192/320 (60.00%), Query Frame = 1
Query: 70 GDKSAKEAARKGKELEGVREKAKKAKDEFAGMEEKAFEVLQAFEAAEEDVKAKVEELREVADRYEKAKALADKIRSVEVDISLQLQEYTKKISDNKMKLEHWAGELKKLRKLHRKEAEHWGLEDDDTSXXXXXXXXXXXXXXXXXXXXMVDGSDEIEASVAEEERMDTGVEETKGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKRAAAGRGGVGLLEDLDAGELNGVDREDLKLKISEMEAEKTAKKETVNLPALEQYRKREREYHERGQELEEATVARKEAREHHETLRRQRLDEFMAGFGQITLRLKEMYQV 1029
GDKSAK+ A+K ELEGVRE+ K EFA +EE AF V+ A+E E A+ EL + +YE+ +A KIR VEVDI+ QL+EY +SDN+ K +HW EL KLR+LH E WG + XXXXXXXXXXXXXXXXXXXX EE+KGG XXXXXXXXXXXXXX AG G+LEDL A L + D++ I +EAE+ A + VN+ AL +YR++E +Y R ++LE AT AR AR HE LRR+RL+EFMAGFG ITL+LKEMYQ+
Sbjct: 907 GDKSAKDGAKKEAELEGVRERLKGVAAEFAALEEAAFAVMTAYETTREAADARKAELEKATAKYEECRARVAKIRGVEVDIAHQLEEYATTLSDNETKAKHWRAELAKLRRLHAAEHAEWGGGETXXXXXXXXXXXXXXXXXXXXXXXXA--------------------EESKGGDDAMDVDGCAAAGXXXXXXXXXXXXXX----------AG----GVLEDLSAEALARRSKADVQFDIGALEAERDALRANVNMSALLEYRRKEGDYLARVRDLEAATDARNAARRRHEELRRRRLEEFMAGFGTITLKLKEMYQM 1192
BLAST of mRNA_L-elsbetiae_contig6211.14803.1 vs. uniprot
Match: A0A8J2SP08_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SP08_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 2.000e-13 Identity = 50/99 (50.51%), Postives = 65/99 (65.66%), Query Frame = 1
Query: 733 LEDLDAGELNGVDREDLKLKISEMEAEKTAKKETVNLPALEQYRKREREYHERGQELEEATVARKEAREHHETLRRQRLDEFMAGFGQITLRLKEMYQV 1029
L LD L D+E +K I+ +E E+ K+ NL + QYR++E EY ER ELE+AT R RE E LR++RLDEFMAGF +ITL+LKEMYQ+
Sbjct: 1103 LPSLDTETLKSADKEQIKYDIAVLEEERDRLKKICNLDTIRQYREKESEYQERLTELEKATDVRNTCREKLEDLRKKRLDEFMAGFARITLKLKEMYQM 1201
BLAST of mRNA_L-elsbetiae_contig6211.14803.1 vs. uniprot
Match: F0YFI0_AURAN (Structural maintenance of chromosomes protein 4 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFI0_AURAN) HSP 1 Score: 80.5 bits (197), Expect = 9.350e-13 Identity = 47/88 (53.41%), Postives = 62/88 (70.45%), Query Frame = 1
Query: 766 VDREDLKLKISEMEAEKTAKKETVNLPALEQYRKREREYHERGQELEEATVARKEAREHHETLRRQRLDEFMAGFGQITLRLKEMYQV 1029
+D+E++K I+ +E E+ K TVNL + +YR ++ EY R ELE+ T AR ARE E LR +RLDEFMAGFG ITL+LKEMYQ+
Sbjct: 1928 LDKEEVKYAIALLEEERDGMKATVNLKTIAEYRAKQAEYFARLDELEQVTAARNAAREALEALRTKRLDEFMAGFGAITLKLKEMYQM 2015
BLAST of mRNA_L-elsbetiae_contig6211.14803.1 vs. uniprot
Match: A0A6A4YZ18_9STRA (SMC_N domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YZ18_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 1.960e-12 Identity = 49/99 (49.49%), Postives = 69/99 (69.70%), Query Frame = 1
Query: 733 LEDLDAGELNGVDREDLKLKISEMEAEKTAKKETVNLPALEQYRKREREYHERGQELEEATVARKEAREHHETLRRQRLDEFMAGFGQITLRLKEMYQV 1029
L +DA EL ++E LK +IS +E ++ K VN+ ++ +Y+K+E+E+ R Q+LE+AT AR R +E LRR RLDEFMAGF ITL+LKEMYQ+
Sbjct: 193 LPTIDASELASCNKEQLKYEISILEQQRDELKAHVNMGSIAEYKKKEKEHMLRMQDLEQATEARDGQRRAYEELRRLRLDEFMAGFRVITLKLKEMYQM 291
BLAST of mRNA_L-elsbetiae_contig6211.14803.1 vs. uniprot
Match: A0A7S2GR65_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GR65_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 2.200e-12 Identity = 45/100 (45.00%), Postives = 71/100 (71.00%), Query Frame = 1
Query: 730 LLEDLDAGELNGVDREDLKLKISEMEAEKTAKKETVNLPALEQYRKREREYHERGQELEEATVARKEAREHHETLRRQRLDEFMAGFGQITLRLKEMYQV 1029
+L D +L DRE++K +I +E E+ + VN+ A++++RK++ +Y R ++L+ T R EARE +E LRR+RL+EFMAGFG+IT++LKEMYQ+
Sbjct: 421 VLPRFDPDQLKRYDREEIKHEIMLLEEERESMAAKVNMSAVDEWRKKDADYQSRFKDLDGVTNQRDEAREAYEELRRKRLEEFMAGFGEITMKLKEMYQM 520
BLAST of mRNA_L-elsbetiae_contig6211.14803.1 vs. uniprot
Match: A0A024TB86_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TB86_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 2.780e-12 Identity = 48/99 (48.48%), Postives = 69/99 (69.70%), Query Frame = 1
Query: 733 LEDLDAGELNGVDREDLKLKISEMEAEKTAKKETVNLPALEQYRKREREYHERGQELEEATVARKEAREHHETLRRQRLDEFMAGFGQITLRLKEMYQV 1029
L +D +L ++E LK +IS +E ++ KE VN+ ++ +Y+K+E+E+ R Q+LE+AT AR R +E LRR RLDEFMAGF ITL+LKEMYQ+
Sbjct: 1102 LPTIDPSDLERCNKEQLKYEISILEQQRDELKEKVNMNSIAEYKKKEKEHMLRMQDLEQATEARDSQRRAYEELRRLRLDEFMAGFRVITLKLKEMYQM 1200
BLAST of mRNA_L-elsbetiae_contig6211.14803.1 vs. uniprot
Match: A0A7S1ZB93_TRICV (Hypothetical protein (Fragment) n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZB93_TRICV) HSP 1 Score: 76.6 bits (187), Expect = 3.240e-12 Identity = 46/93 (49.46%), Postives = 63/93 (67.74%), Query Frame = 1
Query: 751 GELNGVDREDLKLKISEMEAEKTAKKETVNLPALEQYRKREREYHERGQELEEATVARKEAREHHETLRRQRLDEFMAGFGQITLRLKEMYQV 1029
G L D ++LK I +E E+ A + N+ A+E+YR++E +Y R EL+E T R EAR+ HE LRR RL+ FM GFG+ITL+LKEMYQ+
Sbjct: 58 GALAQYDPDELKYDIDLLEKERAAIAKNANMGAIEEYRRKEADYLSRVSELDEITELRNEARKGHEELRRMRLEMFMEGFGRITLKLKEMYQM 150
BLAST of mRNA_L-elsbetiae_contig6211.14803.1 vs. uniprot
Match: W4GGX5_9STRA (Structural maintenance of chromosomes protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGX5_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 3.710e-12 Identity = 49/99 (49.49%), Postives = 69/99 (69.70%), Query Frame = 1
Query: 733 LEDLDAGELNGVDREDLKLKISEMEAEKTAKKETVNLPALEQYRKREREYHERGQELEEATVARKEAREHHETLRRQRLDEFMAGFGQITLRLKEMYQV 1029
L +DA EL ++E LK +IS +E ++ K VN+ ++ +Y+K+E+E+ R Q+LE+AT AR R +E LRR RLDEFMAGF ITL+LKEMYQ+
Sbjct: 1105 LPTIDASELASCNKEQLKYEISILEQQRDELKAHVNMGSIAEYKKKEKEHMLRMQDLEQATEARDGQRRAYEELRRLRLDEFMAGFRVITLKLKEMYQM 1203
BLAST of mRNA_L-elsbetiae_contig6211.14803.1 vs. uniprot
Match: A0A6G0WSE3_9STRA (Structural maintenance of chromosomes protein 4 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSE3_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.190e-11 Identity = 45/99 (45.45%), Postives = 71/99 (71.72%), Query Frame = 1
Query: 733 LEDLDAGELNGVDREDLKLKISEMEAEKTAKKETVNLPALEQYRKREREYHERGQELEEATVARKEAREHHETLRRQRLDEFMAGFGQITLRLKEMYQV 1029
L +++ EL ++E+LK +IS +E ++ K VN+ ++ +Y+K+E+E+ +R Q+LE++T AR R +E LRR RL+EFMAGF ITL+LKEMYQ+
Sbjct: 1091 LPEIEPSELEKCNKEELKYEISILEQQRDELKAHVNMGSIAEYKKKEKEHAQRMQDLEQSTEARDNQRRAYEELRRLRLEEFMAGFRVITLKLKEMYQM 1189
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 308.1 |
Seed ortholog evalue | 5.1e-81 |
Seed eggNOG ortholog | 2880.D8LQ01 |
Preferred name | SMC4 |
KEGG ko | ko:K06675 |
KEGG Pathway | ko04111,map04111 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000003,GO:0000012,GO:0000070,GO:0000166,GO:0000217,GO:0000228,GO:0000278,GO:0000280,GO:0000775,GO:0000785,GO:0000790,GO:0000793,GO:0000794,GO:0000796,GO:0000798,GO:0000799,GO:0000819,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003680,GO:0003682,GO:0003690,GO:0003697,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006323,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0007064,GO:0007076,GO:0007127,GO:0007129,GO:0007130,GO:0007275,GO:0007399,GO:0007422,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0008278,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010032,GO:0010154,GO:0015616,GO:0016043,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022402,GO:0022414,GO:0022607,GO:0030261,GO:0030554,GO:0030892,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034641,GO:0034990,GO:0035639,GO:0036094,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044815,GO:0045132,GO:0045143,GO:0046483,GO:0046982,GO:0046983,GO:0048285,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0050896,GO:0051276,GO:0051304,GO:0051307,GO:0051321,GO:0051383,GO:0051716,GO:0061458,GO:0061982,GO:0070013,GO:0070058,GO:0070192,GO:0070193,GO:0070550,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0098687,GO:0098813,GO:0140013,GO:0140014,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1903046,GO:1903047,GO:1990837 |
EggNOG free text desc. | chromosome condensation |
EggNOG OGs | COG1196@1,KOG0996@2759 |
Ec32 ortholog description | P-loop containing nucleoside triphosphate hydrolase |
Ec32 ortholog | Ec-15_001470.1 |
COG Functional cat. | D |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko03036 |
Exons | 6 |
Model size | 1044 |
Cds size | 1044 |
Stop | 1 |
Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816682.3102121-CDS-L-elsbetiae_contig6211:5086..5269 | 1622816682.3102121-CDS-L-elsbetiae_contig6211:5086..5269 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6211 5087..5269 + |
1691683736.7135427-CDS-L-elsbetiae_contig6211:5086..5269 | 1691683736.7135427-CDS-L-elsbetiae_contig6211:5086..5269 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6211 5087..5269 + |
1622816682.3250945-CDS-L-elsbetiae_contig6211:5693..5849 | 1622816682.3250945-CDS-L-elsbetiae_contig6211:5693..5849 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6211 5694..5849 + |
1691683736.7319422-CDS-L-elsbetiae_contig6211:5693..5849 | 1691683736.7319422-CDS-L-elsbetiae_contig6211:5693..5849 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6211 5694..5849 + |
1622816682.3362079-CDS-L-elsbetiae_contig6211:6326..6653 | 1622816682.3362079-CDS-L-elsbetiae_contig6211:6326..6653 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6211 6327..6653 + |
1691683736.745277-CDS-L-elsbetiae_contig6211:6326..6653 | 1691683736.745277-CDS-L-elsbetiae_contig6211:6326..6653 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6211 6327..6653 + |
1622816682.3470495-CDS-L-elsbetiae_contig6211:7797..7904 | 1622816682.3470495-CDS-L-elsbetiae_contig6211:7797..7904 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6211 7798..7904 + |
1691683736.7560291-CDS-L-elsbetiae_contig6211:7797..7904 | 1691683736.7560291-CDS-L-elsbetiae_contig6211:7797..7904 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6211 7798..7904 + |
1622816682.35791-CDS-L-elsbetiae_contig6211:9471..9636 | 1622816682.35791-CDS-L-elsbetiae_contig6211:9471..9636 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6211 9472..9636 + |
1691683736.7661664-CDS-L-elsbetiae_contig6211:9471..9636 | 1691683736.7661664-CDS-L-elsbetiae_contig6211:9471..9636 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6211 9472..9636 + |
1622816682.3679113-CDS-L-elsbetiae_contig6211:10892..10998 | 1622816682.3679113-CDS-L-elsbetiae_contig6211:10892..10998 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6211 10893..10998 + |
1691683736.7779212-CDS-L-elsbetiae_contig6211:10892..10998 | 1691683736.7779212-CDS-L-elsbetiae_contig6211:10892..10998 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig6211 10893..10998 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig6211.14803.1 >prot_L-elsbetiae_contig6211.14803.1 ID=prot_L-elsbetiae_contig6211.14803.1|Name=mRNA_L-elsbetiae_contig6211.14803.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=348bp
RALDEANDALNRATVEGEGERKKGDKSAKEAARKGKELEGVREKAKKAKD EFAGMEEKAFEVLQAFEAAEEDVKAKVEELREVADRYEKAKALADKIRSV EVDISLQLQEYTKKISDNKMKLEHWAGELKKLRKLHRKEAEHWGLEDDDT SDDASDDMSDDSDDNDDDDDDMVDGSDEIEASVAEEERMDTGVEETKGGG GGEEEEEEKQQQQQQQAERESEGEGAKKSKKGKRAAAGRGGVGLLEDLDA GELNGVDREDLKLKISEMEAEKTAKKETVNLPALEQYRKREREYHERGQE LEEATVARKEAREHHETLRRQRLDEFMAGFGQITLRLKEMYQVHVFE* back to topmRNA from alignment at L-elsbetiae_contig6211:5087..10998+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig6211.14803.1 ID=mRNA_L-elsbetiae_contig6211.14803.1|Name=mRNA_L-elsbetiae_contig6211.14803.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5912bp|location=Sequence derived from alignment at L-elsbetiae_contig6211:5087..10998+ (Laminarionema elsbetiae ELsaHSoW15) AGAGCGCTCGACGAGGCCAACGACGCCCTCAACCGCGCCACCGTTGAGGG
AGAGGGCGAGCGCAAGAAGGGTGACAAGTCCGCGAAGGAGGCTGCCCGCA
AGGGCAAGGAGCTTGAGGGGGTGCGGGAAAAGGCCAAGAAGGCCAAGGAT
GAGTTTGCCGGGATGGAGGAGAAGGCCTTCGAGGTACGGGCGTGTGTGTG
TACAGTGGGTGTTTGGTGTTGGTGGTGGTGGGTGCTGTTGTTTGTTGCTG
TTGTGGTTATGACAGTCCCGTGACAGTCCTGTTGTTGTTGTTGTTGTCGT
TGTCGTTGTTGTTGCTGTTGTCGTTGTTGATGTCGCTGTTGTTGTTGTTG
CTGCTGCTGCTGTTCGTGTTGGTGGTAGTAGTAGTGGGTGCTGTTGCTGA
TGTTGTTGCTGCTGCTGTTCGTGTTGGTGGTAGTAGTCGTGGGTGCTGTT
GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT
TGTTGTTGTTGTTTTGTCCCTGCTTGTGGTGGTGATGGTGGTGGTTTCGG
TGTCCTCTTGGACCTGAAATGACGTTGGTGTTGGTGCTTTGTTTTTTGTT
GTTGCAGGTGTTGCAGGCGTTCGAGGCGGCCGAGGAGGACGTGAAGGCTA
AGGTGGAAGAGCTGCGCGAGGTCGCGGACAGGTACGAGAAGGCCAAGGCG
CTCGCCGACAAGATCAGGAGCGTGGAGGTGGACATCTCCCTCCAGCTTCA
AGAGTACACGAAGGTGTGTGTGCGCGCGCGCGCGTGTGTGTGTATAATAT
ATAGAAGTACAAGGTGTGGCCGCTGACGCGGCCCCGCTTTTATTAAAGCG
ATTCCAAGGTGTGTACATAGTACTTTTAGAAGTGTACCACGTGCATGTGT
GTGCGTGTGTGTGCGCGCGCGTGTGTGTGCCGCTGTCTTTCGGTTCTCGT
CTGAGTTGACGCTGCCCCCCCCCCTTCACCGCCCTCCATATTGCAGCTTC
TTTTTTGGGTGTTTTTTGTTCCTCATACAATATTTGTATATATTTTTTCC
ATTATTATTATTATTTCGTTTGCCCTCCGACAATTGCAGATAGATCCAAC
CAATTCCGTTCATCATACATGCGTCATACTTGATGCTTAAAAACGTACAC
ATATAGTTATCTACCGAATCCATTGTTGTCGCGCGCGGCGCGCGGCGCAT
GTGTTCGTGTTTTCGCGACCCCGAACCCCGAACCCGGCAGAAAATAAGCG
ACAACAAGATGAAGCTGGAGCACTGGGCGGGGGAGCTGAAGAAGCTCCGG
AAGCTCCATCGAAAGGAGGCGGAGCACTGGGGGCTGGAGGACGACGACAC
GAGCGACGACGCGAGTGACGACATGAGTGACGACAGCGACGACAACGACG
ACGACGACGACGACATGGTCGACGGCAGCGACGAGATCGAGGCAAGCGTG
GCGGAAGAGGAGCGCATGGATACGGGGGTCGAGGAGACCAAGGGCGGGGG
GGGCGGGGAAGAGGAAGAGGAGGAGAAGCAGCAGCAGCAGCAGCAGCAGG
CAGAGCGGGAGAGCGAGGTGAGCACGGCGCAGAGCCTGGGAGTGTACGTG
CTCTTTTTCGACAGACGCATACATGCCTCGACATAAACATAACGCACCCA
TTTGCAATAGGGGGGGGGTCCCGCGGTTGCTCCACGAGTGTATGTATTAC
AGTAGTGTTTGGTGGTTTCGGCTTCGTCGCGCGTTCGTTCGTTCGCTCGG
TCGCTTTTTTTCTTTTTTTTTTTTAGCGAAGAACAAGAGCCTGGATGTCT
TAAGGGTTCTCGTGTCGTGGTGGCTGCCCCATGGCGACAGCACCAGCAAG
AATAGATGTTGGGGGTGTTTCCTCATTCATGTAGGAGCATGTTTTTTTTT
ATTTATTTATTTTTTATTGGATTTGTCGTCTGCCCCTCTGGCCCCCATCC
TCCACTTCTACTCTAGCTAGACGACCCAACCGGGGTCACATAGGAGGGGG
GGGTTGGACCCCCTCCTGCGGTGTCTGCCTAGTTTTTTTTTATCGCGAGC
AGGGTATGTATATGTATGTGTTCACTCGCAGCAACGACCGTCTATCTGTT
TTGTTTGCTCTATTCTCTGTCCCTATCCACTTTCGACCTCACCGTCGACG
AGGACTAGAAAGGAATGGCCGAACCCTTCTCGCGATGAAAGGTTTTTTGG
GGGGCCTCGGGGTCAAGAGAATGTCCTTCGTGGCAAGAATGTCCTTCGTG
GCAAGGAGCCTCTAGTGCTGGCAATAGATGTGAAGATTAAAAAAATACAA
TAGATACTTCTAAGAAATACCATGCCAATGCCTGATGCGCTCACGGTTAC
ACTGCAACTGACCCTCTGAAGAGTATTTTTCACCACCGAACTTGTATGTG
GTTATATTACAATACCATATATGGATTACGGATTTTCTTGGGATGGGAAG
AAAAAGGGGGTTAGTACGTATGTTACATGGTATGCCTACAACAGATCCCT
CTGGAACGATATTTTCACGGACTGGACGTAGACTGCTGACATTTGTATAC
ATTAATTAAAAAAAATGTAAAAAAAAATCCACCTTTCCACATAAATTGGC
CACCTTTAGTGTACAGTATTACAATATTTATCGTGGTTTTGCACTGGCGC
TCCCGAGTTTTATTTCCTTTTTTTTCGGTGCGTCGGTGCGGTCGCGTTTC
TTTCGCAGCAGGGCGAGGGTGCGAAGAAGAGCAAGAAGGGCAAGAGGGCG
GCGGCGGGCCGCGGCGGGGTGGGCCTGCTGGAGGACCTGGACGCAGGGGA
GCTCAACGGAGTCGACCGGTGCGGGACCTCTGCTTGTTGTTGTTGTTGTT
GTTGTTGTTATGACAGTCCCGTGACAGTCCCGTTGTTGTTGTTTATTCGC
ATTAAAAACCTTTCCGATCTCTCCTCCACCCAGTACCTTGACAGTTTGTA
TATAGGACTACGCCATATGCGCCCTCTGATTGGTCAGGGCGTGTGTGCGG
GCGGAACCACGTTCGCGGCGATTTTTCGGCCCCACGGCCCCGGTTGGACG
TCGGTGCGGGTTAGGGTTGGGGCTGGGTGGGTTGGGTCGGTCACGTGTGT
GTCTTCTGGTTCTGGGTGTGAACCATCAGCAAAACATCGTGTCAGCAGTA
AAGAGCTACTGCTGTCAGTGTGTGACCCAACCTCCAGTCTTTACGGGGAT
CAGGATAGCTGGCGATCTGGGAAATAGTTTTTATGCCTGTTTTGCGTTGA
AACCCGACGCAGTTTAAAAAAATTGTGCTTAATTCCAGCCGAGCTCGTCG
TTCGTTGGTTTTTCGAATTTGCCGCCCAGAGCAATTGTCCTCTACGGTAG
GTGACACAAGATACCACACCCCCTGAACAGATTTTCAAAGCGCGATTCAT
CCCCAGCAAGAAGAGTGCCAGTGCCGAAAGGGGTGGCGTTAGAAAGGCCC
AGTCCAGGGCTGTCCGAAAATGTGTCGTTTTGTGCTGGCACCCTCTTCGT
TACGGGGTAATGGAGCTCTAAAAGTCGGTCCAGGGGGTGTGGTATCTTGT
GTCACACATCTACGGTAATTTTAAGAGCGATCTGTGAGCAGGATAGCGAC
CAGTCGGTGTGGGGTATTGGTATTTGTGGAGTGTTTGGGCTGTTGCATCA
TTTCCCCCCGCCGTCGGAAAGGGTTATATCTTGGTGAAAACACGGGCCAT
TTTTCTCACCCCGCTGGCTGGCCGTTGTCATTCGCATTTGCACCCACAAA
CCACCCAAAGAGACTCTGCTTGACACACATATGTATGTAGGTGGCGCTCA
TCAGGAGGGAGTTCGTGAGCTATTTATCGGCGTTTCGTCGAACGTGTCAA
AAACGTATCCGGTGTACATGCGGCATTTTTTTATTATTACTATTATTATT
CCGTTTGCCCTCCGACAATTAATTGCAGATAGATCCAATCAATTCTCTTC
ATCATACATGCGTCATACTTGATGCTTAAATACATACACAAATAGTTATA
TACCGAGCGCTAAATTTCATTATTGTATTTGTTCCATCTCGGTAGGCTTT
TGCTTGAAACTCGGTGCAATTGGCGTTTTTTTCTTCGTTTTACTATCTAA
ATACGCCGTCTTTTCTCTACACTAAAACCAGTATAATAGGGAAATATGTT
CCTCCGCAATTTCGCAAAAAGCATAAATATGTACTGTAGTCTACGCGGGG
TTTTTGTCTTAAGCTAACATATGGGATAAAGTATGGAAACCGTTTGGGGG
GGTCGGTGGTTGGGGTTAGGGTTAGGGTTAGGGTTAGAGTTAGTATAAAT
TAATTTCTGCGTAGGCGGTCCAATATGTACCGTGTTGAAGAGCCTAAATC
TCGGGGTCGCGATCACCCACCGCGCGCGCGCGCAGAGAGGACCTGAAGCT
GAAGATCTCCGAAATGGAGGCGGAGAAGACGGCCAAGAAGGAGACCGTCA
ACCTCCCGGCCCTGGAGCAGTACCGCAAGAGGGAGCGGGAGTACCACGAG
AGGGGGCAGGAGCTGGAGGAGGCCACGGTCGCTAGGAAGGAGGCTCGAGA
GTGAGTGACGTCACGGCGGCAGTGAATAGTTGTGCCGCTTTTGATAAATA
GACCGCCTTAGTTTTCATAAATATGCCGCCTTGATTAAATAAATACCCCG
CCTAGTGTTTCCGGCGTATTTGGCGTTCTCGAGGCACAAGAGAAGATTCG
TTTGGGATCGGTCGTTGGTTGCCTTTTCGGCTGAGAGACGGCGGAGGGTG
GTTGATTTTCTAGACCGCCTTGGCGAAGAATTCCTGTCAATGTATATTAT
ATATATAATTATATACATACATACATACATACATACTCTTAGTGGTAAAT
AATGAGGAGAAAATAGAGACGCGACATCAACGGGACCGCCTTCGCGAAGA
ATTCCTGTAATTCCTGTCTATACAGGAAACAGTAGACAGGGGTTCCGTAA
CCCTTGCCCTAACCCTATACCCTAACCCTATACCCTAAACCGACCCCCCA
TTAGCCATTTCCATACTTTATCCCATATGATTTCTTCCATACTTTATTCA
TCCCATTTGATTTCTTCCAGTAAAGAGCTGCGAAGGCTATGTATGTACTG
GATTTTCTTTGTTTGGGGACTGATCGGCTATGTAAGAGCGTTTTCTTTCA
GGGGGGGGGGGGGGGGGGGGGGGCGCCCGGCGGGGCAGACTTTTCTTCCC
CCCTTTTATTCCGTGGGTGAAACAAAAAACCCCCCCCCCTTCCCCCACTC
TTTTTAANNNNNNNNNNGGTGTGGCTTGGTTGTGTGTTTGTTTTTTTTTT
TTTGTGGGGGGGTTGTGCTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGCAGTCGCCCGTCGAGTCAGACTTTGCTTCCCCGCTTGTA
TACCGTAGGTGACACAAGATACCACACCCCCTTGACCGACTCTTATTAGA
GCTCCAGTACATACTCCGTAACGAGGAGGGTGCCGGCACCAAACGACACA
TTTTCGGACAGCCCTCGACTAGGTAGATCTTTCCAACGCCGCCCTTTTTG
GCACTGGCACTCTTCTGGCGGGGGAGGACACGAGCTTTGAAAGCCTGTCC
AGGGGGTGTGGTATCTTGTGTCACCTACGGTATTCGTCGTCTGCCCCACT
GGCCCCCTTCCTCCACTACGACGACTAGCTAGACGACCCGACCGGGGTCA
CACTACAGTTGTAATATCATCATGTGCCGTCGACGACATGATTGTATTCT
CTCGAATCTCGCTTTCTCCGGGTGCCCCCCCCGTACGTGTTGCTGCTGCT
GTCCAGGCACCACGAGACTCTGCGGCGGCAAAGGCTGGACGAGTTCATGG
CCGGCTTCGGACAGATCACGCTCCGCCTCAAGGAGATGTATCAGGTACAT
GTGTTTGAGTGA back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig6211:5087..10998+ >mRNA_L-elsbetiae_contig6211.14803.1 ID=mRNA_L-elsbetiae_contig6211.14803.1|Name=mRNA_L-elsbetiae_contig6211.14803.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2088bp|location=Sequence derived from alignment at L-elsbetiae_contig6211:5087..10998+ (Laminarionema elsbetiae ELsaHSoW15) AGAGCGCTCGACGAGGCCAACGACGCCCTCAACCGCGCCACCGTTGAGGG AGAGGGCGAGCGCAAGAAGGGTGACAAGTCCGCGAAGGAGGCTGCCCGCA AGGGCAAGGAGCTTGAGGGGGTGCGGGAAAAGGCCAAGAAGGCCAAGGAT GAGTTTGCCGGGATGGAGGAGAAGGCCTTCGAGAGAGCGCTCGACGAGGC CAACGACGCCCTCAACCGCGCCACCGTTGAGGGAGAGGGCGAGCGCAAGA AGGGTGACAAGTCCGCGAAGGAGGCTGCCCGCAAGGGCAAGGAGCTTGAG GGGGTGCGGGAAAAGGCCAAGAAGGCCAAGGATGAGTTTGCCGGGATGGA GGAGAAGGCCTTCGAGGTGTTGCAGGCGTTCGAGGCGGCCGAGGAGGACG TGAAGGCTAAGGTGGAAGAGCTGCGCGAGGTCGCGGACAGGTACGAGAAG GCCAAGGCGCTCGCCGACAAGATCAGGAGCGTGGAGGTGGACATCTCCCT CCAGCTTCAAGAGTACACGAAGGTGTTGCAGGCGTTCGAGGCGGCCGAGG AGGACGTGAAGGCTAAGGTGGAAGAGCTGCGCGAGGTCGCGGACAGGTAC GAGAAGGCCAAGGCGCTCGCCGACAAGATCAGGAGCGTGGAGGTGGACAT CTCCCTCCAGCTTCAAGAGTACACGAAGAAAATAAGCGACAACAAGATGA AGCTGGAGCACTGGGCGGGGGAGCTGAAGAAGCTCCGGAAGCTCCATCGA AAGGAGGCGGAGCACTGGGGGCTGGAGGACGACGACACGAGCGACGACGC GAGTGACGACATGAGTGACGACAGCGACGACAACGACGACGACGACGACG ACATGGTCGACGGCAGCGACGAGATCGAGGCAAGCGTGGCGGAAGAGGAG CGCATGGATACGGGGGTCGAGGAGACCAAGGGCGGGGGGGGCGGGGAAGA GGAAGAGGAGGAGAAGCAGCAGCAGCAGCAGCAGCAGGCAGAGCGGGAGA GCGAGAAAATAAGCGACAACAAGATGAAGCTGGAGCACTGGGCGGGGGAG CTGAAGAAGCTCCGGAAGCTCCATCGAAAGGAGGCGGAGCACTGGGGGCT GGAGGACGACGACACGAGCGACGACGCGAGTGACGACATGAGTGACGACA GCGACGACAACGACGACGACGACGACGACATGGTCGACGGCAGCGACGAG ATCGAGGCAAGCGTGGCGGAAGAGGAGCGCATGGATACGGGGGTCGAGGA GACCAAGGGCGGGGGGGGCGGGGAAGAGGAAGAGGAGGAGAAGCAGCAGC AGCAGCAGCAGCAGGCAGAGCGGGAGAGCGAGGGCGAGGGTGCGAAGAAG AGCAAGAAGGGCAAGAGGGCGGCGGCGGGCCGCGGCGGGGTGGGCCTGCT GGAGGACCTGGACGCAGGGGAGCTCAACGGAGTCGACCGGGCGAGGGTGC GAAGAAGAGCAAGAAGGGCAAGAGGGCGGCGGCGGGCCGCGGCGGGGTGG GCCTGCTGGAGGACCTGGACGCAGGGGAGCTCAACGGAGTCGACCGAGAG GACCTGAAGCTGAAGATCTCCGAAATGGAGGCGGAGAAGACGGCCAAGAA GGAGACCGTCAACCTCCCGGCCCTGGAGCAGTACCGCAAGAGGGAGCGGG AGTACCACGAGAGGGGGCAGGAGCTGGAGGAGGCCACGGTCGCTAGGAAG GAGGCTCGAGAAGAGGACCTGAAGCTGAAGATCTCCGAAATGGAGGCGGA GAAGACGGCCAAGAAGGAGACCGTCAACCTCCCGGCCCTGGAGCAGTACC GCAAGAGGGAGCGGGAGTACCACGAGAGGGGGCAGGAGCTGGAGGAGGCC ACGGTCGCTAGGAAGGAGGCTCGAGAGCACCACGAGACTCTGCGGCGGCA AAGGCTGGACGAGTTCATGGCCGGCTTCGGACAGATCACGCTCCGCCTCA AGGAGATGTATCAGGTACATGTGTTTGAGTGAGCACCACGAGACTCTGCG GCGGCAAAGGCTGGACGAGTTCATGGCCGGCTTCGGACAGATCACGCTCC GCCTCAAGGAGATGTATCAGGTACATGTGTTTGAGTGA back to top
|