mRNA_L-elsbetiae_contig620.14787.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig620.14787.1
Unique NamemRNA_L-elsbetiae_contig620.14787.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig620.14787.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE)

HSP 1 Score: 235 bits (599), Expect = 2.940e-70
Identity = 262/402 (65.17%), Postives = 288/402 (71.64%), Query Frame = 1
Query:   64 LDFIFELLTSQQWAELLRAPLQRAAAKGNRGLAQRLVRAGAEIGDALLHEAVRGGNGEIVGDLLESGASFTAKDTKGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSRQCSELGITVIHPVARHGPVEILRAVIEHGADVDAPAVGINQSTALHCAXXXXXXXXXXXXXXXXXXXXXRACGGYTPLHXXXGMCSRXXXXXXXXXXXXXXXXXXXXXXXXMVAVYQAGAKGAAEVVDSLLRAGADEAVVNNDGNKAADMIGLMVEDEDRLPEDFERVRQLLANAPVDRAWRRRGHLVLCRALPDKMQQNQVT----------------------------------GGDWAVVVAKVVSLQEEGIFRTIVGYL 1167
            +DFIFE+LTSQQ AELLRA L+ AAAKGN+ LAQRLVRAGAEIGDAL H AV GG+ EIV DLLES AS  A D  GRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + + ++      H  A  G VEILRA+IEHGADVDA  V   Q TA    XXXXXXXXXXXXXXXXXXXXX          XXX     XXXXXXXXXXXXXXXX        M A  QAG +GAAEVV+SLLRAGADE + N  GNKA DMIG  VE+EDRL ED ERVR+LLANAP DRAWRRRG+L++CRA PD++ + ++T                                  GG+WAVVV+KV+SLQEEGIFRTIV YL
Sbjct:    2 VDFIFEILTSQQLAELLRALLEHAAAKGNKDLAQRLVRAGAEIGDAL-HRAVDGGHREIVSDLLESEASLAATDMDGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRSTQFKCPATHAAALEGHVEILRAIIEHGADVDA--VDAQQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSLLTPLMKAGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARARGIAGESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400          
BLAST of mRNA_L-elsbetiae_contig620.14787.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 3.110e-52
Identity = 195/388 (50.26%), Postives = 239/388 (61.60%), Query Frame = 1
Query:   13 VSNKSGREALRGAEVHTLDFIFELLTSQQWAELLRAPLQRAAAKGNRGLAQRLVRAGAEIGDALLHEAVRGGNGEIVGDLLESGASFTAKDTKGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSRQCSELGITVIHPVARHGPVEILRAVIEHGADVDAPAVGINQSTALHCAXXXXXXXXXXXXXXXXXXXXXRACGGYTPLHXXXGMCSRXXXXXXXXXXXXXXXXXXXXXXXXMVAVY---QAGAKGAAEVVDSLLRAGADEAVVNNDGNKAADMIGLMVEDEDRLPEDFERVRQLLANAPVDRAWRRRGHLVLCRALPDKMQQNQVTGGDWAVVVAKVVSLQEEGIFRTIVGYL 1167
            ++N+  R ALRG E    D   E  T +QWA L++  L+ AA +G+  L ++LV AGAEIG A+ H AVRGG+ +I   LLESGAS +A D +G TPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ++R+  +  I+ +   A  G V+ +R +IEHGADVDA   G     ALH A                      +  G+T LH      +R                         V  Y   +AG +G  EVVD LLR GADE  V  +G +AAD IG+ V +EDR+PE+FE VR+LLANAP DRAWRRR  LVLCRA PDKMQ   ++    A + A+V+ L EEGIFRTIV ++
Sbjct:    1 MANECARGALRGEEERIFDLAAETCTPKQWAGLMQPFLEHAAGRGHEHLTRKLVEAGAEIGTAV-HAAVRGGHCDITEFLLESGASASASDEEGLTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADINRRYGDREISALDIGAGEGHVDFIRTLIEHGADVDATNYG--GVAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQ---LSSDRIARLEARVLGLVEEGIFRTIVRFI 382          
BLAST of mRNA_L-elsbetiae_contig620.14787.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 1.330e-35
Identity = 207/389 (53.21%), Postives = 246/389 (63.24%), Query Frame = 1
Query:   19 NKSGREALRGAEVHTLDFIFELLTSQQWAELLRAPLQRAAAKGNRGLAQRLVRAGAEIGDALLHEAVRGGNGEIVGDLLESGASFTAKDTKGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSRQCSELGITVIHPVARHGPVEILRAVIEHGADVD-APAVGINQSTALHCAXXXXXXXXXXXXXXXXXXXXXRACGGYTPLHXXXGMCSRXXXXXXXXXXXXXXXXXXXXXXXXMVAVYQAGAK-GAAEVVDSLLRAGADEAVVNNDGNKAADMIGLMVEDEDRLPE----DFERVRQLLANAPVDRAWRRRGHLVLCRALPDKMQQNQVTGGDWAVVVAKVVSLQEEGIFRTIVGYL 1167
            NK+ +E L+G E   LD + +     + +E L APL+ A A+G+ GLAQ+LV+AGA+IG   LHEAVR G+  I   LLE+GAS    +    TP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX++ + +E  ++ +   A    VEILR +I+HG +V+ A A G    TALH A                     R   G  PL XXX     XXXXXXXXXXXXXXXXXXXXXXXX     + G + G+ +VV  LLR GADE +V   G  AAD IG       R P     D ER R LL  AP DRAWRRRG LVLC A PD++Q     GGD A +V +V+ L+E G+FRTIV YL
Sbjct:   12 NKAAKETLKGEEERVLDLMLDTRCPHEMSEWLAAPLESAVARGDEGLAQKLVQAGAKIGGVALHEAVRRGHIAIAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLNEFDMSFLDFAASSQDVEILRMLIDHGMEVNLAAAFG----TALHWAAKANRANAIDVLVGAGADIQARNMSGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAADRIGTR-----RFPSTEPGDDERARSLLTRAPADRAWRRRGLLVLCHAYPDRLQ----LGGDLAGLVDRVLGLEEVGVFRTIVLYL 387          
BLAST of mRNA_L-elsbetiae_contig620.14787.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 1.820e-29
Identity = 217/385 (56.36%), Postives = 259/385 (67.27%), Query Frame = 1
Query:   16 SNKSGREALRGAEVHTLDFIFELLTSQQWAELLRAPLQRAAAKGNRGLAQRLVRAGAEIGDALLHEAVRGGNGEIVGDLLESGASFTAKDTKGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSRQCSELGITVIHPVARHGPVEILRAVIEHGADVDAPAVGINQSTALHCAXXXXXXXXXXXXXXXXXXXXXRACGGYTPLHXXXGMCSRXXXXXXXXXXXXXXXXXXXXXXXXMVAVYQAGAK-GAAEVVDSLLRAGADEAVVNNDGNKAADMIGLMVEDEDRLPEDFERVRQLLANAPVDRAWRRRGHLVLCRALPDKMQQNQVTGGDWAVVVAKVVSLQEEGIFRTIVGYL 1167
            +NK+ +E ++G     LD +F+     + +E L APL+ A   G+ GLA++LV+AGA++G   LHE VR G+  +   LLE+GAS    +    TP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX++ + +E  ++ +   A    VEI+R +I+HG +V       +  TAL   XXXXXXXXXXXXXXXXXXXXX          XXX     XXXXXXXXXXXXXXXXXXXXXXXX       G + G+A+VVD LLR GADE +V+  G  AAD IG         PED ER R LLA AP DRAWRRRG LVLCRA PD++Q     GGD A +VA V  L+E G+FRTIV YL
Sbjct:   14 NNKAAKETMKGEGQRVLDLMFDTRWPHEMSEWLAAPLESAVVSGHEGLARKLVQAGAKVGGVALHETVRRGHIAMAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLTEFEVSALDFAALSDHVEIVRMLIDHGMEVHR--ANSDGRTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVGQRHGSAQVVDLLLRWGADETIVSKQGETAADSIGTR-RCHRTDPEDDERARSLLARAPADRAWRRRGLLVLCRAHPDRLQ----LGGDLAGLVAGVGGLEEVGVFRTIVLYL 391          
BLAST of mRNA_L-elsbetiae_contig620.14787.1 vs. uniprot
Match: D8LL12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL12_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 4.030e-23
Identity = 120/189 (63.49%), Postives = 146/189 (77.25%), Query Frame = 1
Query:   13 VSNKSGREALRGAEVHTLDFIFELLTSQQWAELLRAPLQRAAAKGNRGLAQRLVRAGAEIGDALLHEAVRGGNGEIVGDLLESGASFTAKDTKGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSRQCSELGITVIHPVARHGPVEILRAVIEHGADVDA 579
            ++N+ GR AL+GAE  T D   E+LT+  WAE+L+ PL+ AAA+GN  L Q+L+RAGA++G AL H AVR G+ E+V +LLE GA  + KDT+G TPL   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  V+ +C  L  TV+   A  G V+ILRA+++HGADV A
Sbjct:   17 LANEQGRRALKGAEGETFDLFSEVLTTHGWAEMLQFPLECAAAQGNVALTQKLLRAGADMGSAL-HAAVRYGHAEVVTNLLEHGACVSIKDTRGSTPLQVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVNVRCGLLKRTVLSLAAEKGHVDILRALVKHGADVTA 204          
BLAST of mRNA_L-elsbetiae_contig620.14787.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 2.300e-18
Identity = 185/452 (40.93%), Postives = 232/452 (51.33%), Query Frame = 1
Query:   31 REALRGAEVHTLDFIFELLTSQQWAELLRAPLQRAAAKGNRGLAQRLVRAGAEIGDALLHEAVRGGNGEIVGDLLESGASFTAKDTKGRTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSRQ-----------------------------------CSELGITVIHPVARHGPVEILRAVIEHGADVDAPAVGINQSTALHCAXXXXXXXXXXXXXXXXXXXXXRACGGYTPLHXXXGMCSRXXXXXXXXXXXXXXXXXXXXXXXXMVAVYQAGAKGAAEVVDSLLRAGADEAVVNNDGNKAADMIGLMVEDED-RLPEDFERVRQLLANAPVDRAWRRRGHLVLCRALPDKMQQNQVTGGD-------------------------------------WAVVVAKVVSLQEEGIFRTIVGYL 1167
            R+ LRGA +  LD +    T ++WA  L+ PL+ A   G+R LA  LVR GAE G A+ +EA+  G+ E++  LL++GAS +A D +G    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +                                      L +  +H       V+ ++ ++E GAD+   +   ++ST LH A                                     S     XXXXXXXXXXXXXXXXXXXX  A   AG +G+AE+VD LLR GADE   + +G + AD +G  +E  D  L  +   V +LLANAP DRAWRRRG LVLCRA   + +  Q  GGD                                     W     +VV L+EEGIFR++VG+L
Sbjct:    6 RKPLRGAALRVLDLVSAASTPEEWAAWLKVPLEIAVRTGDRDLASMLVRGGAEAGTAV-NEAIACGDTEVMSLLLDNGASVSATDAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLREWYDGAHRSXXXXXXXXXXXXXXXXXXXXXXXVNAGDNLFVPALHLAVAFNKVKAVKVLLEAGADIQGHS--FSRSTPLHLASFKQP--------------------------------SVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRRGTPEGGTGDEWRSASKRVVELEEEGIFRSVVGFL 422          
BLAST of mRNA_L-elsbetiae_contig620.14787.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 6.340e-16
Identity = 83/258 (32.17%), Postives = 108/258 (41.86%), Query Frame = 1
Query:  493 GITVIHPVARHGPVEILRAVIEHGADVDAPAVGINQSTALHCAXXXXXXXXXXXXXXXXXXXXXRACGGYTPLHXXXGMCSRXXXXXXXXXXXXXXXXXXXXXXXXMVAVYQAGAKGAAEVVDSLLRAGADEAVVNNDGNKAADMIGLMVEDEDRLPEDFERVRQLLANAPVDRAWRRRGHLVLCRA--------LPDKMQQNQVTGG---------------DWAVVVAKV-------VSLQEEG---IFRTIVGYL 1167
            GIT +   +       +  + E GA+++A A   N ST LH A                     +     TPLH                                +VA  +AG+ G AE+VD LLR GADE  V+ +G+ AADM+ L  E+ D L ED +RVR+LLA AP DRAWRRRG L+L RA           +  Q    G                DWA VV+ +       +SL  +G   IF  IVGYL
Sbjct:  557 GITALRVASAFDKAPAIDVLTEAGANIEAQA---NGSTPLHVASQEGRLAAGIALLRHGASVGKKNAAAQTPLH--------------------------------LVAA-KAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEEPSRAEIDWAGVVSMLMGDGVDPISLMGDGANLIFEKIVGYL 778          
BLAST of mRNA_L-elsbetiae_contig620.14787.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 1.790e-13
Identity = 58/153 (37.91%), Postives = 81/153 (52.94%), Query Frame = 1
Query:  823 YQAGAKGAAEVVDSLLRAGADEAVVNNDGNKAADMIGLMVEDEDRLPEDFERVRQLLANAPVDRAWRRRGHLVLCRALPDKM-------------------------QQNQVTGG-------------DWAVVVAKVVSLQEEGIFRTIVGYL 1167
            + AG +GA EVVD LLR  ADE   +  G+   +++G M  + D +  + +RV +LL  AP DRAWRRRG LVLCRA P+++                         ++ QV GG             +W+ +V +V+ L +EGIFRTIVGYL
Sbjct:  248 HSAGDEGAVEVVDLLLRWNADETDDDAYGHTPGNIVGCMTPETDSMFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRAHPERLGLRQNASHVQESTVLRVTRSRTKLVEREQVAGGSGEGAAADGRTAREWSNMVYRVLGL-DEGIFRTIVGYL 399          
BLAST of mRNA_L-elsbetiae_contig620.14787.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 3.030e-13
Identity = 47/84 (55.95%), Postives = 57/84 (67.86%), Query Frame = 1
Query:  811 MVAVYQAGAKGAAEVVDSLLRAGADEAVVNNDGNKAADMIGLMVEDEDRLP---EDFERVRQLLANAPVDRAWRRRGHLVLCRA 1053
            ++A  QAG +G   +VD LLR GADE  +N DG  AA+++G  +E     P   +D ERVR LL NAPVDRAWRRRG LVLCRA
Sbjct:  210 IIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYA-ACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRA 292          
BLAST of mRNA_L-elsbetiae_contig620.14787.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 6.040e-13
Identity = 63/188 (33.51%), Postives = 82/188 (43.62%), Query Frame = 1
Query:  499 TVIHPVARHGPVEILRAVIEHGADVDAPAVGINQSTALHCAXXXXXXXXXXXXXXXXXXXXXRACGGYTPLHXXXGMCSRXXXXXXXXXXXXXXXXXXXXXXXXMVAVYQAGAKGAAEVVDSLLRAGADEAVVNNDGNKAADMIGLMVEDEDRLP---EDFERVRQLLANAPVDRAWRRRGHLVLCRA 1053
            +V+   A+ G   +LRA+++HG DV+    G    T+LH A                           TP                                  ++A  QAG +G   +VD LLR GADE  +N DG  AA+++G  +E     P   +D ERVR LL NAP DRAWRRRG LVLCRA
Sbjct:  158 SVLDFAAQKGDACVLRAILQHGVDVNRRTDGY---TSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYA-ACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRA 341          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig620.14787.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXK5_9PHAE2.940e-7065.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKL4_ECTSI3.110e-5250.26Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
D7G137_ECTSI1.330e-3553.21Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7G1U1_ECTSI1.820e-2956.36Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D8LL12_ECTSI4.030e-2363.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FYD0_ECTSI2.300e-1840.93Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6H5JHY9_9PHAE6.340e-1632.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G981_ECTSI1.790e-1337.91Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D7G6X8_ECTSI3.030e-1355.95Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KNU3_9PHAE6.040e-1333.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig620contigL-elsbetiae_contig620:25720..26994 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score193.0
Seed ortholog evalue2.7e-46
Seed eggNOG ortholog2880.D7FKL4
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons2
Model size1170
Cds size1170
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816680.452103-CDS-L-elsbetiae_contig620:25719..258091622816680.452103-CDS-L-elsbetiae_contig620:25719..25809Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig620 25720..25809 -
1691683735.139934-CDS-L-elsbetiae_contig620:25719..258091691683735.139934-CDS-L-elsbetiae_contig620:25719..25809Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig620 25720..25809 -
1622816680.4638748-CDS-L-elsbetiae_contig620:25914..269941622816680.4638748-CDS-L-elsbetiae_contig620:25914..26994Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig620 25915..26994 -
1691683735.1564982-CDS-L-elsbetiae_contig620:25914..269941691683735.1564982-CDS-L-elsbetiae_contig620:25914..26994Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig620 25915..26994 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig620.14787.1prot_L-elsbetiae_contig620.14787.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig620 25720..26994 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig620.14787.1

>prot_L-elsbetiae_contig620.14787.1 ID=prot_L-elsbetiae_contig620.14787.1|Name=mRNA_L-elsbetiae_contig620.14787.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=390bp
MSDPVSNKSGREALRGAEVHTLDFIFELLTSQQWAELLRAPLQRAAAKGN
RGLAQRLVRAGAEIGDALLHEAVRGGNGEIVGDLLESGASFTAKDTKGRT
PLHIAADLGQTEMVELLLLKGADKDACNNQEHTPLYLAVQSGKLATALAL
LAAGADVSRQCSELGITVIHPVARHGPVEILRAVIEHGADVDAPAVGINQ
STALHCAAWNNNVEAIDVLVEAGANIEARACGGYTPLHLACGMCSREALL
SLLKHGATINAQDNGANTPLMVAVYQAGAKGAAEVVDSLLRAGADEAVVN
NDGNKAADMIGLMVEDEDRLPEDFERVRQLLANAPVDRAWRRRGHLVLCR
ALPDKMQQNQVTGGDWAVVVAKVVSLQEEGIFRTIVGYL*
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mRNA from alignment at L-elsbetiae_contig620:25720..26994-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig620.14787.1 ID=mRNA_L-elsbetiae_contig620.14787.1|Name=mRNA_L-elsbetiae_contig620.14787.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1275bp|location=Sequence derived from alignment at L-elsbetiae_contig620:25720..26994- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCCGACCCAGTGTCGAACAAGAGCGGGCGGGAGGCGCTTCGAGGAGC AGAGGTGCACACGTTAGATTTCATCTTCGAGTTGCTCACATCACAACAGT GGGCGGAGTTGCTGAGAGCTCCACTACAGCGCGCCGCCGCCAAGGGCAAC AGAGGCCTCGCACAGAGGCTGGTGAGGGCAGGAGCAGAGATCGGGGATGC ACTGCTGCATGAGGCCGTTCGAGGCGGAAATGGAGAGATCGTGGGCGATC TGCTGGAGAGTGGGGCGTCATTCACCGCCAAGGACACCAAAGGCCGCACT CCTCTCCACATTGCTGCTGATTTGGGCCAAACAGAGATGGTGGAGCTGTT GCTGCTGAAGGGGGCTGACAAAGACGCGTGTAACAACCAAGAACACACAC CATTGTATTTGGCAGTCCAGTCTGGTAAATTGGCTACCGCACTGGCTCTG TTGGCGGCCGGCGCGGATGTTAGCCGTCAATGCAGTGAACTCGGGATTAC AGTGATCCACCCGGTGGCTCGACATGGGCCTGTTGAGATCTTGAGGGCTG TGATCGAGCACGGAGCGGACGTGGACGCTCCTGCTGTTGGCATAAATCAA AGCACTGCTCTTCATTGTGCCGCATGGAATAACAACGTTGAGGCCATCGA TGTACTCGTCGAAGCTGGGGCCAACATCGAAGCACGGGCTTGTGGCGGCT ACACACCTCTTCATCTTGCTTGCGGAATGTGCAGTCGCGAAGCCTTGCTT AGCCTTTTGAAGCATGGTGCGACCATCAACGCCCAGGACAATGGCGCCAA CACACCGTTGATGGTAGCAGTATATCAAGCAGGAGCAAAAGGAGCTGCGG AGGTGGTGGACTCCCTGCTGAGGGCAGGTGCAGATGAGGCCGTTGTTAAC AATGATGGCAACAAAGCGGCGGATATGATCGGGTTAATGGTCGAAGACGA GGACCGTCTGCCCGAGGATTTCGAGCGCGTGCGCCAGCTGTTGGCCAATG CTCCGGTCGACCGGGCGTGGCGTCGCCGAGGCCACCTGGTCTTATGCCGT GCCCTCCCAGACAAGATGCAGCAGAACCAGGTGATCAGCGACACCCATCA TACCGACACAGCGCGGAGGACTCGCAGCCGTGCTATGCTGGCAAGGGCCG GGGGGGATGTGGGGGGCAGCACGGTGTTGGACGAGGTCACCGGTGGCGAC TGGGCCGTTGTGGTGGCGAAGGTGGTTTCGTTGCAGGAGGAGGGCATATT CCGGACGATCGTGGGGTATCTGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig620:25720..26994-

>mRNA_L-elsbetiae_contig620.14787.1 ID=mRNA_L-elsbetiae_contig620.14787.1|Name=mRNA_L-elsbetiae_contig620.14787.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2340bp|location=Sequence derived from alignment at L-elsbetiae_contig620:25720..26994- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCCGACCCAGTGTCGAACAAGAGCGGGCGGGAGGCGCTTCGAGGAGC
AGAGGTGCACACGTTAGATTTCATCTTCGAGTTGCTCACATCACAACAGT
GGGCGGAGTTGCTGAGAGCTCCACTACAGCGCGCCGCCGCCAAGGGCAAC
AGAGGCCTCGCACAGAGGCTGGTGAGGGCAGGAGCAGAGATCGGGGATGC
ACTGCTGCATGAGGCCGTTCGAGGCGGAAATGGAGAGATCGTGGGCGATC
TGCTGGAGAGTGGGGCGTCATTCACCGCCAAGGACACCAAAGGCCGCACT
CCTCTCCACATTGCTGCTGATTTGGGCCAAACAGAGATGGTGGAGCTGTT
GCTGCTGAAGGGGGCTGACAAAGACGCGTGTAACAACCAAGAACACACAC
CATTGTATTTGGCAGTCCAGTCTGGTAAATTGGCTACCGCACTGGCTCTG
TTGGCGGCCGGCGCGGATGTTAGCCGTCAATGCAGTGAACTCGGGATTAC
AGTGATCCACCCGGTGGCTCGACATGGGCCTGTTGAGATCTTGAGGGCTG
TGATCGAGCACGGAGCGGACGTGGACGCTCCTGCTGTTGGCATAAATCAA
AGCACTGCTCTTCATTGTGCCGCATGGAATAACAACGTTGAGGCCATCGA
TGTACTCGTCGAAGCTGGGGCCAACATCGAAGCACGGGCTTGTGGCGGCT
ACACACCTCTTCATCTTGCTTGCGGAATGTGCAGTCGCGAAGCCTTGCTT
AGCCTTTTGAAGCATGGTGCGACCATCAACGCCCAGGACAATGGCGCCAA
CACACCGTTGATGGTAGCAGTATATCAAGCAGGAGCAAAAGGAGCTGCGG
AGGTGGTGGACTCCCTGCTGAGGGCAGGTGCAGATGAGGCCGTTGTTAAC
AATGATGGCAACAAAGCGGCGGATATGATCGGGTTAATGGTCGAAGACGA
GGACCGTCTGCCCGAGGATTTCGAGCGCGTGCGCCAGCTGTTGGCCAATG
CTCCGGTCGACCGGGCGTGGCGTCGCCGAGGCCACCTGGTCTTATGCCGT
GCCCTCCCAGACAAGATGCAGCAGAACCAGATGTCCGACCCAGTGTCGAA
CAAGAGCGGGCGGGAGGCGCTTCGAGGAGCAGAGGTGCACACGTTAGATT
TCATCTTCGAGTTGCTCACATCACAACAGTGGGCGGAGTTGCTGAGAGCT
CCACTACAGCGCGCCGCCGCCAAGGGCAACAGAGGCCTCGCACAGAGGCT
GGTGAGGGCAGGAGCAGAGATCGGGGATGCACTGCTGCATGAGGCCGTTC
GAGGCGGAAATGGAGAGATCGTGGGCGATCTGCTGGAGAGTGGGGCGTCA
TTCACCGCCAAGGACACCAAAGGCCGCACTCCTCTCCACATTGCTGCTGA
TTTGGGCCAAACAGAGATGGTGGAGCTGTTGCTGCTGAAGGGGGCTGACA
AAGACGCGTGTAACAACCAAGAACACACACCATTGTATTTGGCAGTCCAG
TCTGGTAAATTGGCTACCGCACTGGCTCTGTTGGCGGCCGGCGCGGATGT
TAGCCGTCAATGCAGTGAACTCGGGATTACAGTGATCCACCCGGTGGCTC
GACATGGGCCTGTTGAGATCTTGAGGGCTGTGATCGAGCACGGAGCGGAC
GTGGACGCTCCTGCTGTTGGCATAAATCAAAGCACTGCTCTTCATTGTGC
CGCATGGAATAACAACGTTGAGGCCATCGATGTACTCGTCGAAGCTGGGG
CCAACATCGAAGCACGGGCTTGTGGCGGCTACACACCTCTTCATCTTGCT
TGCGGAATGTGCAGTCGCGAAGCCTTGCTTAGCCTTTTGAAGCATGGTGC
GACCATCAACGCCCAGGACAATGGCGCCAACACACCGTTGATGGTAGCAG
TATATCAAGCAGGAGCAAAAGGAGCTGCGGAGGTGGTGGACTCCCTGCTG
AGGGCAGGTGCAGATGAGGCCGTTGTTAACAATGATGGCAACAAAGCGGC
GGATATGATCGGGTTAATGGTCGAAGACGAGGACCGTCTGCCCGAGGATT
TCGAGCGCGTGCGCCAGCTGTTGGCCAATGCTCCGGTCGACCGGGCGTGG
CGTCGCCGAGGCCACCTGGTCTTATGCCGTGCCCTCCCAGACAAGATGCA
GCAGAACCAGGTCACCGGTGGCGACTGGGCCGTTGTGGTGGCGAAGGTGG
TTTCGTTGCAGGAGGAGGGCATATTCCGGACGATCGTGGGGTATCTGTGA
GTCACCGGTGGCGACTGGGCCGTTGTGGTGGCGAAGGTGGTTTCGTTGCA
GGAGGAGGGCATATTCCGGACGATCGTGGGGTATCTGTGA
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