mRNA_L-elsbetiae_contig6169.14746.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig6169.14746.1
Unique NamemRNA_L-elsbetiae_contig6169.14746.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig6169.14746.1 vs. uniprot
Match: D7FWT4_ECTSI (Polynucleotide adenylyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT4_ECTSI)

HSP 1 Score: 644 bits (1660), Expect = 2.110e-229
Identity = 325/355 (91.55%), Postives = 334/355 (94.08%), Query Frame = 1 
Query:    1 MAGRGLSGAPAAGAAGGKPRAPGHVPRPMYEPINTSAPSKTDLEMDAKLEAFMDGNVPVMTSADLRRREQVLGRIRATFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPKSDIDAICVAPQFCTSELFFTTLKERIIANPLVTNVNAIETAAVPIIEFVFDDIDIDLGLACLPVPTVPPTLDIDDDQVPNYESFLPVVRCVRRWAKARGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAGLGLEVWNARANSWHCMPIITPAYPVMNSSANVSRRDWFTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFIR 1065
            MAGRGL  A      GGK RA GHVPRPMYEPINTSAPSKTDLE+DAKLEAFM  NVPVMTS DLRRREQVLG+IRA FLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEP SDIDAICVAPQFCTSELFFTTLKER+IA+PLV NVNAI+TAAVPIIE VFD+IDIDLGLACLPVPTVPPTLDIDDDQVPNY+SFLPVVRCVRRWAK+RGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDA LGLEVWNARANSWHCMPIITPAYPVMNSSANVSR   FTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFF+R
Sbjct:    1 MAGRGLGAAGGPSGGGGK-RAAGHVPRPMYEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRAMFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQVPNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEVWNARANSWHCMPIITPAYPVMNSSANVSR---FTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLR 351
[Close]
BLAST of mRNA_L-elsbetiae_contig6169.14746.1 vs. uniprot
Match: A0A6H5JKW8_9PHAE (Polynucleotide adenylyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKW8_9PHAE)

HSP 1 Score: 629 bits (1622), Expect = 3.430e-221
Identity = 324/380 (85.26%), Postives = 335/380 (88.16%), Query Frame = 1 
Query:    1 MAGRGLSGAPAAGAAGGKPRAPGHVPRPMYEPINTSAPSKTDLEMDAKLEAFMDGNVPVMTSADLRRREQVLGRIRATFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPKSDIDAICVAPQFCTSELFFTTLKERIIANPLVTNVNAIETAAVPIIEFVFDDIDIDLGLACLPVPTVPPTLDIDDDQV-------------------------PNYESFLPVVRCVRRWAKARGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAGLGLEVWNARANSWHCMPIITPAYPVMNSSANVSRRDWFTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFIR 1065
            MAGRGL  A    + GGK RA GHVPRPMYEPINTSAPSKTDLE+DAKLEAFM  NVPVMTS DLRRREQVLG+IRA FLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEP SDIDAICVAPQFCTSELFFTTLKER+IA+PLV NVNAI+TAAVPIIE VFD+IDIDLGLACLPVPTVPPTLDIDDDQV                         PNY+SFLPVVRCVR+WAK+RGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDA LGLEVWNARANSWHCMPIITPAYPVMNSSANVSR   FTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFF+R
Sbjct:    1 MAGRGLGAAGGPSSGGGK-RAAGHVPRPMYEPINTSAPSKTDLELDAKLEAFMRDNVPVMTSVDLRRREQVLGKIRAMFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPNSDIDAICVAPQFCTSELFFTTLKERLIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQVLDGVDRPTEKCVNGPRVTNMIHRLVPNYDSFLPVVRCVRKWAKSRGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEVWNARANSWHCMPIITPAYPVMNSSANVSR---FTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLR 376
[Close]
BLAST of mRNA_L-elsbetiae_contig6169.14746.1 vs. uniprot
Match: A0A835ZG61_9STRA (Polynucleotide adenylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG61_9STRA)

HSP 1 Score: 341 bits (875), Expect = 5.990e-109
Identity = 182/356 (51.12%), Postives = 226/356 (63.48%), Query Frame = 1 
Query:   73 VPRPM--YEPINTSAPSKTDLEMDAKLEAFMDGNVPVMTSADLRRREQVLGRIRATFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPKSDIDAICVAPQFCTSELFFTTLKERIIANPLVTNVNAIETAAVPIIEFVFDDIDIDLGLACLPVPTVPPTLDIDDDQV-------------------------PNYESFLPVVRCVRRWAKARGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAGLGLEVWNARANSWHCMPIITPAYPVMNSSANVSRRDWFTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFF 1059
             P+P+  +  IN   P+  D   DAKL  ++  NVPVM+  ++  RE+VL  +   F +WV ++ L  G+ EE A+AAGG I TSGSYRL IHEP SDIDA C+AP  CT   FFT+L++ +  +P VTN NAIETAAVPI+ F FD ++IDLGL CLPV +V    +IDDD V                         PNY SFLPVVR VR WAK RG+Y NKMGYLGGVNFNI+VAFACQ+YP A PS LL  FFK+M  W WPN I L +P+DA LGL+VW A  N WH MPIITPAYP MNSS  VS     +L+VM  EF RG  +   ++      +++ +L  PS+FF
Sbjct:    5 TPKPVQCFPVINNDPPTDKDRANDAKLFEYIAANVPVMSKQEMMHRERVLTEVTQIFKRWVRETCLAKGVPEEVARAAGGIIRTSGSYRLAIHEPGSDIDAHCIAPMPCTRADFFTSLRKLLQDHPEVTNFNAIETAAVPIMTFDFDGVNIDLGLGCLPVESVSEDFNIDDDAVLKGVDSATEKCLNGPRVTNLIHRLVPNYASFLPVVRLVRVWAKRRGIYGNKMGYLGGVNFNILVAFACQLYPRASPSKLLASFFKVMHSWAWPNPIHLTRPHDAALGLQVWQAAQNPWHVMPIITPAYPAMNSSLAVSAH---SLEVMRREFRRGDAICRRVLDGGAEGASWDELVRPSEFF 357
[Close]
BLAST of mRNA_L-elsbetiae_contig6169.14746.1 vs. uniprot
Match: A0A6G0WNJ7_9STRA (Poly(A) polymerase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WNJ7_9STRA)

HSP 1 Score: 326 bits (836), Expect = 1.740e-103
Identity = 180/361 (49.86%), Postives = 235/361 (65.10%), Query Frame = 1 
Query:   61 APGHVPRPMYEPINTSAPSKTDLEMDAKLEAFMDGNVPVMTSADLRRREQVLGRIRATFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPKSDIDAICVAPQFCTSELFFTTLKERIIANPLVTNVNAIETAAVPIIEFVFDDIDIDLGLACLPVPTVPPTLDIDDDQV-------------------------PNYESFLPVVRCVRRWAKARGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAGLGLEVWNAR--ANSWHCMPIITPAYPVMNSSANVSRRDWFTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFI 1062
            APG V    Y+PI T+ P   DLEM AKL+A+MD N P  T  +++RR  +LG +R  F  WV D  ++ G+ EE A  AGG I  SGSYRL ++EP +DID ICVAP+F T E FF++LK+ ++ +  VTN+ AIE A VPI+ F +++I+IDL +A L   ++P  L I DD +                         PN ESF+ V+R VRRWAK RGLYSNK+GYLGGVN+ I+V F  Q+YP A PSTLL RFF +++ W WP+AIQL + YDA LGLEVWNA   AN +  MPI+TPAYP MNSS NVS     +L+VM  EF+RGL+VV  I+   G+   +S LFEPS++F+
Sbjct:    8 APGTVLEQAYKPIRTTPPEPIDLEMSAKLQAYMDKNFPTETEKNIQRRTIILGDLRRIFRAWVKDVCIQRGVLEEIANEAGGIILVSGSYRLGVNEPGADIDTICVAPKFVTREDFFSSLKDILLKHSKVTNLVAIEGAVVPILTFDYEEINIDLQIAILDRSSIPDDLRILDDNILDGVDTATEKSLNGPRVTELMIKLTPNRESFIAVLRIVRRWAKRRGLYSNKLGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLSQWKWPSAIQLCKTYDAKLGLEVWNANFGANRFQVMPILTPAYPSMNSSYNVSIH---SLNVMKEEFTRGLDVVKSIINNGGA--DWSPLFEPSEYFV 363
[Close]
BLAST of mRNA_L-elsbetiae_contig6169.14746.1 vs. uniprot
Match: A0A024TSM9_9STRA (Poly(A) polymerase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TSM9_9STRA)

HSP 1 Score: 318 bits (816), Expect = 2.610e-100
Identity = 174/361 (48.20%), Postives = 228/361 (63.16%), Query Frame = 1 
Query:   61 APGHVPRPMYEPINTSAPSKTDLEMDAKLEAFMDGNVPVMTSADLRRREQVLGRIRATFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPKSDIDAICVAPQFCTSELFFTTLKERIIANPLVTNVNAIETAAVPIIEFVFDDIDIDLGLACLPVPTVPPTLDIDDDQV-------------------------PNYESFLPVVRCVRRWAKARGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAGLGLEVWNARA--NSWHCMPIITPAYPVMNSSANVSRRDWFTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFI 1062
            APG V    Y+PI  + P   DLE+ AKLEAFM  + P  T  +++RR  +L  +R  F  WV D  L+ G+ EE A  AGG +  SGSYRL ++EP +DID  CVAP+F T E FF++LK+ ++ NP VTN+ AIE A VPI+ F ++DI+IDL +A L   ++P  ++I DD +                         PN  SF+ V+R VRRWAK RGLYSNK+GYLGGVN+ I+V F  Q+YP A PSTLL RFF +++ W WP+AIQL + YDA LGLE+WNA    N +  MPI+TPAYP MNSS NVS     +L VM  EFSRGLE V  I+   G+   ++ LF PS++F+
Sbjct:    8 APGTVLEQAYKPIRITPPDPADLELSAKLEAFMASHFPTETEKNIQRRTMILAELRRIFRAWVKDVCLQRGVLEEIANEAGGIVLVSGSYRLGVNEPGADIDTNCVAPKFVTREDFFSSLKDILLKNPKVTNLVAIEGATVPILTFDYEDINIDLQIAILDRSSIPDNINILDDNILSGVDSATEKSLNGPRVTELMIRLTPNRSSFIAVLRIVRRWAKRRGLYSNKLGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLSQWKWPSAIQLCKTYDAKLGLEIWNANVGGNRFQVMPILTPAYPSMNSSYNVSVH---SLSVMKEEFSRGLETVKAIIASGGT--DWAPLFAPSEYFV 363
[Close]
BLAST of mRNA_L-elsbetiae_contig6169.14746.1 vs. uniprot
Match: G4YPR7_PHYSP (Poly(A) polymerase n=7 Tax=Phytophthora TaxID=4783 RepID=G4YPR7_PHYSP)

HSP 1 Score: 320 bits (819), Expect = 3.330e-100
Identity = 176/357 (49.30%), Postives = 227/357 (63.59%), Query Frame = 1 
Query:   70 HVPRPMYEPINTSAPSKTDLEMDAKLEAFMDGNVPVMTSADLRRREQVLGRIRATFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPKSDIDAICVAPQFCTSELFFTTLKERIIANPLVTNVNAIETAAVPIIEFVFDDIDIDLGLACLPVPTVPPTLDIDDDQV-------------------------PNYESFLPVVRCVRRWAKARGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAGLGLEVWNARA--NSWHCMPIITPAYPVMNSSANVSRRDWFTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFF 1059
            HV    Y+ I T+ P   DLE  AKL++FMD + P  + A++ RR  +L  +R+ F QWV    ++ G+ EE A  AGG+I  SGSYRL ++EP +DID ICVAP+  T E FF++LKE  + +P V+N+ AIE A VPI+ F +++I+IDL +A LP  ++P  L+I DD V                         PN ESF+ V+R VRRWAK RGLYSNKMGYLGGVN+ I+V F  Q+YP A PSTLL RFF ++  W WP AIQL + +DA LGLEVWNA A  N +  MPI+TPAYP MNSS NVS     +L VM  EF RGL +V  ++ + GS   +  LFEPSDFF
Sbjct:   11 HVLEQAYKAIRTTPPEPKDLEQSAKLQSFMDEHFPTESDANITRRSLILAELRSIFRQWVKQVCMDKGVPEEMAADAGGQILVSGSYRLGVNEPGADIDTICVAPRHVTREDFFSSLKEIFLQHPKVSNLVAIEGAIVPILTFDYEEINIDLQIAILPRNSIPENLNILDDHVLVGVDPATEKSLNGPRVTELMIKLTPNRESFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLNNWKWPLAIQLCKTHDANLGLEVWNANAGHNRYQVMPILTPAYPSMNSSFNVSTH---SLTVMKEEFKRGLTIVQDVLSKGGS--EWGPLFEPSDFF 362
[Close]
BLAST of mRNA_L-elsbetiae_contig6169.14746.1 vs. uniprot
Match: A0A485KNG9_9STRA (Poly(A) polymerase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KNG9_9STRA)

HSP 1 Score: 318 bits (815), Expect = 4.400e-100
Identity = 172/361 (47.65%), Postives = 234/361 (64.82%), Query Frame = 1 
Query:   61 APGHVPRPMYEPINTSAPSKTDLEMDAKLEAFMDGNVPVMTSADLRRREQVLGRIRATFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPKSDIDAICVAPQFCTSELFFTTLKERIIANPLVTNVNAIETAAVPIIEFVFDDIDIDLGLACLPVPTVPPTLDIDDDQV-------------------------PNYESFLPVVRCVRRWAKARGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAGLGLEVWNARA--NSWHCMPIITPAYPVMNSSANVSRRDWFTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFI 1062
            APG V    Y+PI T+ P   DLE+  KL A+M+ + P  T  +++RR  +LG +R+ F  WV D  ++ G+ EE A  AGG I  SGSYRL ++EP +DID ICVAP+F T E FF++LK+ ++ N  VTN+ +IE A VPI+ F + +I+IDL +A L   ++P  +++ DD +                         PN  SF+ V+R VRRWAK RGLYSNK+GYLGGVN+ I+V F  Q+YP A PSTLL RFF +++ W WP+AIQL + YDA LGLE+WNA    N +  MPI+TPAYP MNSS NVS     +L+VM  EFSRGLE+V  I+ + G+   +S+LFEPS++F+
Sbjct:    8 APGTVLEQAYKPIRTTPPEPIDLELSQKLLAYMEKHFPTETEKNIQRRTIILGELRSIFRAWVKDVCIQRGVLEEIANEAGGIILVSGSYRLGVNEPGADIDTICVAPKFVTREDFFSSLKDILLKNSKVTNLVSIEGATVPIMTFDYQEINIDLQIAILDRSSIPDDINVLDDNILAGVDTPTEKSLNGPRVTELMIKLTPNRSSFIAVLRIVRRWAKKRGLYSNKLGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLSQWKWPSAIQLCKTYDAKLGLEIWNASVGGNRYQVMPILTPAYPSMNSSYNVSVH---SLNVMKEEFSRGLEMVKAIINDGGA--DWSRLFEPSEYFV 363
[Close]
BLAST of mRNA_L-elsbetiae_contig6169.14746.1 vs. uniprot
Match: A0A8K1CSA9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CSA9_PYTOL)

HSP 1 Score: 318 bits (814), Expect = 7.790e-100
Identity = 176/357 (49.30%), Postives = 226/357 (63.31%), Query Frame = 1 
Query:   70 HVPRPMYEPINTSAPSKTDLEMDAKLEAFMDGNVPVMTSADLRRREQVLGRIRATFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPKSDIDAICVAPQFCTSELFFTTLKERIIANPLVTNVNAIETAAVPIIEFVFDDIDIDLGLACLPVPTVPPTLDIDDDQV-------------------------PNYESFLPVVRCVRRWAKARGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAGLGLEVWNARA--NSWHCMPIITPAYPVMNSSANVSRRDWFTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFF 1059
            HV    Y+ I T+ P   DLE   KL+ +MD +    +  +++RR  +L  +RATF +WV    L  G+ EE A  AGG+I  SGSYRL ++EP +DID ICVAP+  T E FF+TLK+  + +P VTN+ AIE A VPI+ F +++I+IDL +A LP  T+P  L+I DD +                         PN ESF+ V+R VRRWAK RGLYSNKMGYLGGVN+ I+V F  Q+YP A PSTLL RFF +++ W WP AIQL + YDA LGLEVWNA +  N +H MPI+TPAYP MNSS NVS     +L VM  EF RGL++V  I+ + G    +  LFEPSDFF
Sbjct:   11 HVLEQAYKAIRTTPPEPKDLEQSDKLQTYMDKHFATESDENIQRRSLILADLRATFREWVKQVCLAKGVPEEIAADAGGQILVSGSYRLGVNEPGADIDTICVAPRHVTREDFFSTLKDIFLKHPKVTNLVAIEGAIVPILTFDYEEINIDLQIAILPRNTIPDNLNILDDNILAGVDTATEKSLNGPRVTELMIKLTPNRESFIGVLRVVRRWAKRRGLYSNKMGYLGGVNWCILVCFVNQLYPTAAPSTLLLRFFMVLSTWKWPLAIQLCKTYDAKLGLEVWNANSGNNRYHVMPILTPAYPSMNSSFNVSTH---SLSVMKDEFKRGLDLVQDILGKGGD--DWDALFEPSDFF 362
[Close]
BLAST of mRNA_L-elsbetiae_contig6169.14746.1 vs. uniprot
Match: A0A1W0AAC0_9STRA (Poly(A) polymerase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AAC0_9STRA)

HSP 1 Score: 316 bits (810), Expect = 1.170e-99
Identity = 173/352 (49.15%), Postives = 226/352 (64.20%), Query Frame = 1 
Query:   88 YEPINTSAPSKTDLEMDAKLEAFMDGNVPVMTSADLRRREQVLGRIRATFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPKSDIDAICVAPQFCTSELFFTTLKERIIANPLVTNVNAIETAAVPIIEFVFDDIDIDLGLACLPVPTVPPTLDIDDDQV-------------------------PNYESFLPVVRCVRRWAKARGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAGLGLEVWNAR--ANSWHCMPIITPAYPVMNSSANVSRRDWFTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFI 1062
            Y+ I T+ P   DLE+ AKL+A+MD + P+    +++RR  +LG +R+ F  WV D  L+ G+ EE A  AGG I  SGSYRL ++EP +DID ICVAP+F T E FFT+LKE ++ +  VTN+ AIE A VPI+ F +++I+IDL +A L   ++P  +++ DDQ+                         PN  SF+ V+R VRRWAK RGLYSNKMGYLGGVN+ I+V F  Q+YP A PSTLL RFF ++  W WP AIQL +  DA LGLEVWNA    N +  MPI+TPAYP MNSS +VS     +L VM  EF RGLEVV  I++  G+   +S LFEPS FF+
Sbjct:    7 YKAIRTTPPEPADLELSAKLQAYMDEHYPMELDVNIQRRTIILGELRSIFRAWVKDVCLKRGLPEEIANEAGGIILVSGSYRLGVNEPGADIDTICVAPKFVTREDFFTSLKEILLKHAKVTNLVAIEGALVPILTFDYEEINIDLQIAILDRNSIPDNINVLDDQILSGVDPATEKSLNGPRVTELVIKLTPNRASFIAVLRIVRRWAKRRGLYSNKMGYLGGVNYCILVCFVNQLYPTAAPSTLLLRFFMILTNWKWPLAIQLCKTIDANLGLEVWNASNGTNKYQVMPILTPAYPSMNSSYSVSSH---SLSVMKEEFKRGLEVVKTIIENGGT--DWSPLFEPSPFFV 353
[Close]
BLAST of mRNA_L-elsbetiae_contig6169.14746.1 vs. uniprot
Match: W4GFD2_9STRA (Poly(A) polymerase n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GFD2_9STRA)

HSP 1 Score: 313 bits (803), Expect = 1.760e-98
Identity = 170/361 (47.09%), Postives = 229/361 (63.43%), Query Frame = 1 
Query:   61 APGHVPRPMYEPINTSAPSKTDLEMDAKLEAFMDGNVPVMTSADLRRREQVLGRIRATFLQWVIDSALEAGMSEEAAKAAGGKIYTSGSYRLRIHEPKSDIDAICVAPQFCTSELFFTTLKERIIANPLVTNVNAIETAAVPIIEFVFDDIDIDLGLACLPVPTVPPTLDIDDDQV-------------------------PNYESFLPVVRCVRRWAKARGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAGLGLEVWNARA--NSWHCMPIITPAYPVMNSSANVSRRDWFTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFI 1062
            APG V    Y+PI  + P   D+E+ AKLEAFM  + P  T  +++RR  +L  +R  F  WV D  L+ G+ EE A  AGG +  SGSYRL ++EP +DID  CVAP+F T E FF++LKE ++ +P VTN+ AIE A VPI+ F ++DI+IDL +A L + ++P  ++I DD +                         PN  SF+ V+R VRRWAK RGLYSNK+GYLGGVN+ I+V F  Q+YP A PSTLL RFF +++ W WP+AIQL + YDA LGLE+WNA    N +  MPI+TPAYP MNSS NVS     +L VM  EF+RG  +V  I+   G+   ++ LF+PS++F+
Sbjct:   10 APGTVLEQAYKPIRMTPPEPVDVELSAKLEAFMASHFPTETEKNIQRRTMILAELRRIFRAWVKDVCLQRGVLEEIANEAGGTVLVSGSYRLGVNEPGADIDTNCVAPKFVTREDFFSSLKEILLKHPKVTNLVAIEGATVPILTFDYEDINIDLQIAILNLSSIPDNINILDDNILRGVDSATEKSLNGPRVTELMINLTPNRSSFIAVLRIVRRWAKRRGLYSNKLGYLGGVNWCILVCFINQLYPTAAPSTLLLRFFMVLSQWKWPSAIQLCKTYDAKLGLEIWNANVGGNRFQVMPILTPAYPSMNSSYNVSVH---SLSVMKEEFARGYAMVKTIIAAGGA--DWAPLFDPSEYFV 365
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6169.14746.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWT4_ECTSI2.110e-22991.55Polynucleotide adenylyltransferase n=1 Tax=Ectocar... [more]
A0A6H5JKW8_9PHAE3.430e-22185.26Polynucleotide adenylyltransferase n=1 Tax=Ectocar... [more]
A0A835ZG61_9STRA5.990e-10951.12Polynucleotide adenylyltransferase n=1 Tax=Tribone... [more]
A0A6G0WNJ7_9STRA1.740e-10349.86Poly(A) polymerase n=1 Tax=Aphanomyces euteiches T... [more]
A0A024TSM9_9STRA2.610e-10048.20Poly(A) polymerase n=2 Tax=Aphanomyces invadans Ta... [more]
G4YPR7_PHYSP3.330e-10049.30Poly(A) polymerase n=7 Tax=Phytophthora TaxID=4783... [more]
A0A485KNG9_9STRA4.400e-10047.65Poly(A) polymerase n=1 Tax=Aphanomyces stellatus T... [more]
A0A8K1CSA9_PYTOL7.790e-10049.30Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1W0AAC0_9STRA1.170e-9949.15Poly(A) polymerase n=1 Tax=Thraustotheca clavata T... [more]
W4GFD2_9STRA1.760e-9847.09Poly(A) polymerase n=11 Tax=Aphanomyces astaci Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6169contigL-elsbetiae_contig6169:3198..11341 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score646.4
Seed ortholog evalue8e-183
Seed eggNOG ortholog2880.D7FWT4
KEGG koko:K09254,ko:K14376
KEGG Pathwayko03015,ko04014,ko04624,ko05202,ko05203,map03015,map04014,map04624,map05202,map05203
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0002682,GO:0002683,GO:0003006,GO:0003674,GO:0003824,GO:0004652,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005847,GO:0005849,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008285,GO:0009653,GO:0009791,GO:0009908,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0022414,GO:0031123,GO:0031124,GO:0031347,GO:0031348,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034641,GO:0042127,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043631,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045088,GO:0045824,GO:0046483,GO:0048366,GO:0048367,GO:0048437,GO:0048438,GO:0048441,GO:0048444,GO:0048446,GO:0048449,GO:0048451,GO:0048465,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048608,GO:0048646,GO:0048731,GO:0048827,GO:0048856,GO:0050776,GO:0050777,GO:0050789,GO:0050794,GO:0061458,GO:0065007,GO:0070013,GO:0070566,GO:0071704,GO:0080134,GO:0090304,GO:0090567,GO:0090696,GO:0090697,GO:0090698,GO:0099402,GO:1901360,GO:1905392,GO:1905393
EggNOG free text desc.interspecies interaction between organisms
EggNOG OGsCOG5186@1,KOG2245@2759
EC2.7.7.19
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03000,ko03019
Exons9
Model size1068
Cds size1068
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816675.5722916-CDS-L-elsbetiae_contig6169:3197..34401622816675.5722916-CDS-L-elsbetiae_contig6169:3197..3440Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6169 3198..3440 +
1691683731.3703668-CDS-L-elsbetiae_contig6169:3197..34401691683731.3703668-CDS-L-elsbetiae_contig6169:3197..3440Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6169 3198..3440 +
1622816675.5939693-CDS-L-elsbetiae_contig6169:4164..43081622816675.5939693-CDS-L-elsbetiae_contig6169:4164..4308Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6169 4165..4308 +
1691683731.3890324-CDS-L-elsbetiae_contig6169:4164..43081691683731.3890324-CDS-L-elsbetiae_contig6169:4164..4308Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6169 4165..4308 +
1622816675.6062844-CDS-L-elsbetiae_contig6169:5910..60031622816675.6062844-CDS-L-elsbetiae_contig6169:5910..6003Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6169 5911..6003 +
1691683731.3997169-CDS-L-elsbetiae_contig6169:5910..60031691683731.3997169-CDS-L-elsbetiae_contig6169:5910..6003Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6169 5911..6003 +
1622816675.6200945-CDS-L-elsbetiae_contig6169:6611..67161622816675.6200945-CDS-L-elsbetiae_contig6169:6611..6716Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6169 6612..6716 +
1691683731.4116986-CDS-L-elsbetiae_contig6169:6611..67161691683731.4116986-CDS-L-elsbetiae_contig6169:6611..6716Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6169 6612..6716 +
1622816675.630773-CDS-L-elsbetiae_contig6169:7721..78561622816675.630773-CDS-L-elsbetiae_contig6169:7721..7856Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6169 7722..7856 +
1691683731.420986-CDS-L-elsbetiae_contig6169:7721..78561691683731.420986-CDS-L-elsbetiae_contig6169:7721..7856Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6169 7722..7856 +
1622816675.6415796-CDS-L-elsbetiae_contig6169:9218..93381622816675.6415796-CDS-L-elsbetiae_contig6169:9218..9338Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6169 9219..9338 +
1691683731.430352-CDS-L-elsbetiae_contig6169:9218..93381691683731.430352-CDS-L-elsbetiae_contig6169:9218..9338Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6169 9219..9338 +
1622816675.6519248-CDS-L-elsbetiae_contig6169:9929..100271622816675.6519248-CDS-L-elsbetiae_contig6169:9929..10027Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6169 9930..10027 +
1691683731.4421194-CDS-L-elsbetiae_contig6169:9929..100271691683731.4421194-CDS-L-elsbetiae_contig6169:9929..10027Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6169 9930..10027 +
1622816675.6640592-CDS-L-elsbetiae_contig6169:10644..106901622816675.6640592-CDS-L-elsbetiae_contig6169:10644..10690Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6169 10645..10690 +
1691683731.452873-CDS-L-elsbetiae_contig6169:10644..106901691683731.452873-CDS-L-elsbetiae_contig6169:10644..10690Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6169 10645..10690 +
1622816675.6769602-CDS-L-elsbetiae_contig6169:11257..113411622816675.6769602-CDS-L-elsbetiae_contig6169:11257..11341Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6169 11258..11341 +
1691683731.4630585-CDS-L-elsbetiae_contig6169:11257..113411691683731.4630585-CDS-L-elsbetiae_contig6169:11257..11341Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig6169 11258..11341 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6169.14746.1prot_L-elsbetiae_contig6169.14746.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig6169 3198..11341 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig6169.14746.1

>prot_L-elsbetiae_contig6169.14746.1 ID=prot_L-elsbetiae_contig6169.14746.1|Name=mRNA_L-elsbetiae_contig6169.14746.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=356bp
MAGRGLSGAPAAGAAGGKPRAPGHVPRPMYEPINTSAPSKTDLEMDAKLE
AFMDGNVPVMTSADLRRREQVLGRIRATFLQWVIDSALEAGMSEEAAKAA
GGKIYTSGSYRLRIHEPKSDIDAICVAPQFCTSELFFTTLKERIIANPLV
TNVNAIETAAVPIIEFVFDDIDIDLGLACLPVPTVPPTLDIDDDQVPNYE
SFLPVVRCVRRWAKARGLYSNKMGYLGGVNFNIMVAFACQMYPNAGPSTL
LHRFFKLMAGWNWPNAIQLVQPYDAGLGLEVWNARANSWHCMPIITPAYP
VMNSSANVSRRDWFTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPS
DFFIR*
back to top

mRNA from alignment at L-elsbetiae_contig6169:3198..11341+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig6169.14746.1 ID=mRNA_L-elsbetiae_contig6169.14746.1|Name=mRNA_L-elsbetiae_contig6169.14746.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8144bp|location=Sequence derived from alignment at L-elsbetiae_contig6169:3198..11341+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTGGTAGAGGGCTCAGCGGTGCCCCCGCTGCCGGGGCGGCCGGCGG
CAAGCCTAGAGCGCCGGGGCACGTTCCCAGGCCCATGTACGAGCCCATCA
ACACGTCGGCACCCTCAAAGACGGACCTGGAGATGGATGCCAAGCTGGAG
GCGTTCATGGACGGCAACGTTCCCGTCATGACGAGCGCCGACCTCCGCAG
GAGGGAGCAGGTGCTCGGCAGGATCCGAGCAACGTTTCTCCAGGTGATTT
GAGGGAACCACTGCTGTACTTGTAGTACTTGCGGGAACCGGGTCGCTGGT
CTTGTAGGCACCGTTGTAGGTACCGGGGACGGTGAAGGGGGTTTAGTGTT
TCTTAGAGTCAGTCCTCTTGGACGACCTTTAGTTGCATGCAGGTTGGATG
TATGTCGACCGCTGACGTTTGGTAGAAAAAATGGGCGTTTTTTTTTTTGG
AGGGGGGGGGGGGGGGGGGGGGTTGTGGGGGGGGGGGGGAAGGGGGGGTA
GAGCGGAAGAGCAACCGCCTGAACCCCAGTCCCCCCACCAAATCTTATGC
NNNNNNNNNNGGTGGGTGGGTGGTGGGGGGTGGGTGGGGGGGGGGGGGGG
TGGGGGGGGGGTTTTGGGGTTTTTGGGGTTGGGGCGGGGGGGGTGCAAGG
GCTGCTCCTGTGTAAGCGGCCAATTGGCGTTTTTTTTTCGGTCTGTTTTC
GTGTCTCGAAGGCTCAACTTAAACTCGTGCATTAAAAAAAAAAAAAAATG
ATCTTGCCAACAACAACAATAGCACAGGAGCAACCCGTGTGTTTGCTAGC
GCACCCACAACGCACAAGAGCAATCAACTCGTCATTTTCCCGCAGCCACA
AATCGATTCGCGCCCACGTATATACATCACAGACAATCAATGCTTATCTT
GACCGCGATTTTTCTTGTTATTTTCTCTCTTGGGTTGTTGTTCTTCTCGG
CGGGAAAACGAGGACAGTGGGTCATCGACTCGGCGTTGGAAGCGGGGATG
TCAGAGGAAGCAGCCAAGGCCGCCGGCGGCAAGATCTACACGTCCGGGTC
TTACCGCCTGCGAATACACGAGCCCAAGTCCGATATCGACGCTATCTGCG
TCGCTCCCCAGGTGTGTGGAGCTTGCTTTGTCTGATTGTCCATCTGTCTG
TCTGTCCATCTGTCTGTCTGATTGTGTCTGTCCATCTGTCTGTCCATCTG
TCTGTCTGTCTGTCTGTCTTTCTGTCTGTCTTTCTGTCTGTCTTTCTGTC
TGTCTTTCTGTCTGTCTGTCCGCGCGTAAAATGTAGACGTAGAAGTATGT
CTCTGCTGGTTGCCGTCGCCATTTTATGCCTGTTTCAGGATTTTACCCTT
TGTGTCGCAAAAGTCGAGCCAGTTGTGCGAGCGATAAAGTATGACGTGGC
GTGCCTGTAGAGGCTGCTACGGGCAGTGCTGCCCTCCATTGGTCGGTCGG
GTTTGACTAAGGAACGGGGTCGGGGTCAGGGATAGAGCCGGGTTTCCGCT
CCGTGCCGTTTCGTCACACCCGTATTTTTGCTTTTGGGTGCCAAGACCTG
GTAAAACGGGGCCTGTCGGCACCCAGCGTCCTTGGGTGCAAACAGCATCC
GTCCCCCAGAGATAAGAAAGATAAATCTCAGAGAGTGCAAGGATTGTCTC
AGTCAAACAAGCATGCAGCTATTTACTCTATCATATGATTTATATTACAT
GTGTATGTCTATATCCAGAAACTACACGAGCTACTGCTGTGTGGGTTTTG
TACCGTTGTAGTAGCCGGGGGGGGGGGGGCTCTAAAAGGTGTTTGTTCGA
CGCCCCCCCTGCTGGAACGACCTTCTTTTCACAGGTGGGACGTACGTCGA
CATGTATTGATGTAATTCGCTGACGTTTAGAAGTAGACAAGTTAATAAAC
AGAAAACAAAAAACCTTCGCGTGTATTGTGCAAGTTTTTTTTTTTTTTTT
TTTTTTGCATACATATGTATATCTATGCACGTCGCGCGGACTGCTTCTTC
AAAAGGGGAGGGGGGGGGGTTGGCTGGAAATAGTGATTGTGGTTGACGCT
GGTTGCGCGCTCCCGTCGCTAAGTGCTGCGAACTACCGATGCTACAGCAG
CAGCAGTAGCAGCATTTATGAGCCCTGTTCCTCTTCGTGATATTAATGAA
TGCATATTTCGACCTCACCGTCGGCGAGGGAAAGGGACGGCTGAACCCTG
CCTTCTCGCGATAAAAATCTTAAGGGGGGCAAGCACCGCAGACGGAGGGA
GTGGGGGCCTTGGGGAAAGGAACCCTCCTGTGTGACCACGGTTCAGTACT
CTGGCAAGATGTCCTCATGACAGGGAGCCCATCGAGCACTGGAAATAAAT
GCGAAGAAAAAACAAAATGTACACGTACATATCAGCAGTCTATGTCTATT
GAGTCTGTGAAAAAGTCGTTCCAGAGGGAACTGTTGTAGGCATACCATGT
AACATACTAACCCCCCCTTTTTTCCCGTCGAAGACATGCTTACTCGCACA
AAATCCGTGATCCATATAACACAGTTCGTAATGTTGTGCTTTGTCGTGCG
CTCTCTGGTGAGTGCTCGGCCTCGATGGGCTCGTCGTTCCCGGGTTCCGT
CCTTCCTGGGTCCCAATGTTTTTTTTTTTCTTGATCTGCTACTTACTCCT
TTACAGTGTTGTACGTCGTGACAATGTTCTTTTTGTTTCTGGTTCTGCTA
ACTCCTCTCACAGTTTTGTACGTCGGAGCTCTTTTTCACGACCCTGAAGG
AGAGGATAATCGCGAACCCCCTCGTGACCAACGTGAACGCCATCGAGACT
GCCGCGGTGAGCCTTGGGGGTCGAACGGTCGAATGGTCGAACGACTTCAT
CACTCTGATGCGTTGCTGCTGTCGTCGATAGTTCTTACGCCGTGGTCCGC
TCGCTTGTCTCTTTTTTATTTGTGCTTTTTGAAAGCCGCATTTTTTTTTT
TTTTATGTGTAGGAGTATCTATATTTTTCGGTTTTGTTTTTCTAGATATA
TTTTTGGATCCCCACACCAAGAACGCTCTGCCGCACACCGATGTACCCCC
CCCAGAGTTGTGGCACCGCAGATCAAACAGGTCGTTCAAAACTTTCACCC
CACTAAATATGAGTTAAAGCAACAACAGAGTGCGCCTCGTGAAGCGGTCT
ATGGGGGGCACGCAGCTCGCCGTTCGTGCGACTCGCTCAACACCTGCCGG
ATACTCGCTCTTGGCTCTTGGTTGGTGTTTAAAAGCTAAAGGGACGGGCG
TATTCCGTCCTTTGAGGCCTTAGCAACTATTGTTGGGATTCGAGGTCTGT
GTGGGCTGACTGACGACCGCACCGTGCATGAATCACATCCGAACCGCACC
CCCACTGGGTCGTTTCACCCCCCCCCCTCCCGCCGTTGTCCCACCCCGGT
GCCGCGCTGTGTAGGTACCCATCATTGAGTTCGTATTCGACGATATCGAC
ATCGACTTGGGCCTCGCCTGCCTGCCGGTGCCCACGGTACCTCCGACCCT
AGACATCGACGACGACCAGGTATTGCAGGGCGCGTGCTCGTGCTACACAC
ATAGGAGTATTTATATGCCAAGCCTATTGAACCGCAGACCCCGACCGCCC
CCTTAAACCTTGCAAACGTACGGGCTGCGAAAATAGACGTGCTTCCGACG
GAGCTGCTGTCGCAAGTAGGTAATATGTAGTATGTATGTATGTATGTATG
TATGTATGTGTGTACATCGAGTTGTTGCACTCTTGTTTTTTTTGTGAATG
TGTAAACCATTTTTGGCTTTTGAAAGGGTGACTGGCTGGGTTGTACGCAC
GGCTGGGGTCACCGATGTTGTTGTTGTTGTTGTTGTTGTTGTTAAGAGTG
TTTTCTGCATCGTTTTTGGTCGCGTCTATCTAAATAGGTTCTCGACGGAG
TGGACAGACCGACGGAGAAGTGCGTCAACGGTCCCAGGGTGACGAACATG
ATCCACAGGCTGGTGAGCAAGAGAGGGGCAGGGAGAGGGAGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTCGTGATTCTATTG
GGGAGAGGGGTACGGAAGTGTTGCGCCGCGTGTTGGCTCTTGACCATTGG
TCACCATCCCATTCGAGACGGAGCACAGCTTAAGATAAACTGGCCGGAAA
TACCCCGAGGGTGTGTAGACGTCGACGCATGCATAAACAGATGTGTTTCT
GAGCCTTTTGTCGAGCTGTTTTGGAACCATTACCACGCCGTGGGGCGGGG
GGGGGGGGGCACACAACTGGTGGGGTTAAACCCTCGAAACCCTCGCTGCA
TCTCTCATCGCTGCAACAGCTCAACTACCCCCCCCCTCCCGCTGCGCGGA
CCACGATCTCGCCTTCTTTCTTCTGCTTGCTGCTACTTGTGCGTTTGCTT
GCTGCTGCCTCTGCATCTGCTTGCTGCCGCCTTCTGCCGCTTGCTGCTGC
TGCTGCTGGCTCTCCCCTTCGAAGGTGCCGAACTACGAATCCTTTCTGCC
GGTGGTGAGGTGCGTCCGCAGGTGGGCCAAGGCTCGAGGCCTGTACAGCA
ACAAGATGGGCTACCTGGGGGGGGTCAATTTCAACATCATGGTGGCGTTC
GCGTGCCAGGTGTGGGCTGCTGTTGCTGCCGCCTCTCGCAACGACATGTA
CAATGATCTATGTATGTATGTATGTATTGCTCTCGTCGCGGTGCCCCCAA
GGAGACAACCATTCAACCGGCGGTTTTGAGCACCACAACAGCAGAGAAAA
CACGCACTACTTCGAAGTATAATGCAAGGCACGTAGTTCCCACTGAGAAA
AGACAACGCCGCCGCTCAGGGCAAATGTTCTTCCGACGGGGGCACAAGAA
TATCAAACCAAACTTCGCAGGTGGGGAATGGGAGGTCGGTTCCCTGTTAG
CGGAGTGCCACCCGCGAGTGGCGCCGTGCCTCGCCTACTGCGTTGCAAGT
GGGTCGTGTGTCCAGACCCAGCCAGACGCAAAGTATATAACGGGGACAAT
AGTATAATCACATTGGCCGAAACGGCGGTATGTGGGCAGGACCAAAAAAT
AGCAGGGGCTGGACCGGTCTCTGAATACCAAATAGGGCCGCTTGTTACCC
GACACGGGCCCCCCTCCTCGCGCACAGGCAAACACAGCTCATACCCTGCC
GCATGTGCTGCAGTGTTTTCTTCGTTTTCCTGGTTTGCCACGGAGTTAGG
GTTACAATAGAGGTCACGGTGTCAACTTTTGGAGGCCGAAAGACATAGCG
TTTGTTAGCTTTTTTTGTTTTTTCTCTTCTTGTTCGTGCCAGCTTCTATT
CTGCCTTCTTACCTCTGGTGCCGTTTTTGTTGTTGTTGTGGACAGTCCCG
TTGTTGAGGCCTTCACTAAGATTTCGGACATACGGGCTTTTAAAAAGTAA
ACAATGAATCAACGATGGGAACCTACCCCACACTAGAGCAAGGACTCGAT
ATGGGGTTCAAATTCCCGAGTGGAGTGGAGTAGAGTGAAGCGGTTTGTTT
GACAGACGCCTCTGACCCCCGAAGAAACCGAAAAATCTTGTTCCGAGAAC
GAAGACGATTGTCCCACCCGCCCAAGCGCGTCAAGGTCGGTCGCCACACC
GCCGCGTCGTAGGGAGGCTGGCGAGGGTGTTCTACGATTAGACAAAAAAC
AGCCAGTTTCCCGTTTGTCTTCGCGGCGATGGGCTCCACCCGGACGTATC
GGTCAAAGCACCATCTACCGCGCCAGTGCAATCAGTGCCAGAGAAACGAA
CCAAGTTTTACCGCCGCGGTTGTTTTGGTTTATTGTTGCCGTGTTTGTGT
GCGTGTTCTTGATTAATGCCATGCGTGTGTCTGTTGCGGCTGAATACCGA
CCAGCCCCAAACTGGCCTACACCCGGATATTCACGTTCTTTCGTTCCATT
TGTGTGTGTGTGTGTGTCGGCGGCGGCGGCGGCGGCGGTCGCCGTGTTTG
ATTTGGCAATGTATTCGTCAGATGTACCCGAACGCCGGGCCATCGACCCT
ACTGCACCGGTTCTTCAAGCTCATGGCCGGGTGGAACTGGCCCAACGCCA
TCCAGCTCGTGCAGCCCTACGACGCTGGGCTCGGGCTGGAGGTGAGTGTG
TGTGTGTGTGTGTGTGTAGAGAGAGAGAGAGAGAGAGAGAAGGAGAGCGG
AAGCAAAGTTTAACACCAGCTTCATTAAAAGCTTGTCATCCATCCGTCTG
CGAGAAAGTGTTTGAAGTTTCCCGGACGTCCTTTTGGCTGAACAGTAGTG
GACGGAGCAATATCTGATCATCAAAGAGCACAACCCCTCTCTCCCCCCCT
GCCTGAATAACACTGTTCTCATGGGTTGGGTTGGGTTGGGTTGGGTTGGG
TTGGGTAGGGCCGGGTTGGTCCCCTCGAGTCTGCACCATGCCAAACACTC
GCCCCCCTTTTCGAGTCGAAAACACCCTCGCCGAGCGCCAAGCCATGCCT
TACATGTATATAGCTCTATTTGGGCGGGTTTTGCTCTTCCCGGGGGAAAA
GAGGTGCGTGTGTGCGCGTGAGCGCACCCATTGATCGTGCTGCGTATGAT
GCATCTAGTCGTATAGACATACGTATGTAAATACAAGAAAGATGACCCCC
CCCCCCCCCCCCCCCCCCCCGGCTCCCACCTCTCCTGCGTTTCCCCGAAC
GCCCGCCTTGGCATGCGTACCGACCGCTGTAGGTGTGGAACGCTCGAGCG
AACAGCTGGCACTGCATGCCCATCATCACTCCCGCCTACCCCGTCATGAA
CTCCTCGGCAAACGTTTCCAGGCGCGATTGGTTGTTGCGTTTGCGGTCGC
GTTTGCGTTTGTTGGGGTTGCTTGCCGCTGACATGGGCGTGGTGCGCCCT
GGACAAAGTACAGCGGCCGGGCCGCCGATCGAGACCGACTGGACTCCTCG
GCGAAGGCTCCCGGGCTCACGCTGTGGTTGTTGTACCTGTTGTGGTCACA
TTATAAACCGTTCCGATCTTCCTGCTCAGTACACTCGTCCGTCTGTACGG
GGGTCGAAACACCCCCGGGTTGAATTTTTTAAAATAAAACAAAGAATCAA
AGATGGAACCTAACCCATACTAGAGCAAAGACTCGATATGGGGTTCAAAC
GGTATTCCATAGAATTTGTTGCAGGCTTCTCGGCATAGCAGTAGTCAGGT
CTACACGAGCCTCAGAAATTTAGGTATAGGCTGACTGACCAGTCTACCAG
TCTGACGGACAACATCACCACGCTCGATCGGTGGATGCCAACCACCGACT
GCTGGAACTCCCGTAAACATATGCATGTAGGTACATGTACATGCCTGTGT
GTGTTTTTTTGCCGTGAAAAGTACCACCAGCGAAGTGAGCGAGTGTGTAT
TTATGTATTTATTCGTTCGGCCATGTTTGTTGTGTTTTGTTTTGCAGGTT
TACACTGGACGTGATGACTTCGGAGTTCTCCAGGGGGCTCGAGGTGATTT
TAGCGCCTGTAGGGGGGATCACCTTCGCGAAGAACTCCTGTCTATATAGG
GAATAATAGACAGGGGTTCCGTAACCGTAACCGTAACCGTAACCCCAAAC
GGACCCCCCATTAAATGTTTCCATGCTTTATCCCAAATCGTTTATTACTT
TGTTACAGTCAAACCTAAGAAGGCTACTGTGTAGAGGGGAGGGCTTGCTC
TCGGCCGCTCTGTTGTTGCGATGAACTCTTGTCTATACATGCTGCTGTTT
CGTTCTCCTGGCACGCGTTTCTGCTGGCGCTGGTGTCGTTGCTGTTGTTG
CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGACTAGGCACAC
CCGTTCGCGTGCGAGGTCGGGTGTCGATATCGTCACAATAGTCGGCGAAA
TATCGCAGATACATACGTACCAACTACCAACCTTCCAATAGAATGGCGCA
CATGAGTACGCGTGAGGCTCGATTTGTTTTCCTTCTCGTGCACTCACTGC
ACCATCACTGCACCCACAGCAGCTGTCGCACTCCCTTTATTGTCGCGCTG
CGAATCAAAGGTTGTAAACGGGATCATGAAGGAGAAGGGCTCTCTCTCGG
CCTTTTCGAAGCTGTTCGAGCCCTCGGACTTCTTCATCAGGTGA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig6169:3198..11341+

>mRNA_L-elsbetiae_contig6169.14746.1 ID=mRNA_L-elsbetiae_contig6169.14746.1|Name=mRNA_L-elsbetiae_contig6169.14746.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2136bp|location=Sequence derived from alignment at L-elsbetiae_contig6169:3198..11341+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTGGTAGAGGGCTCAGCGGTGCCCCCGCTGCCGGGGCGGCCGGCGG
CAAGCCTAGAGCGCCGGGGCACGTTCCCAGGCCCATGTACGAGCCCATCA
ACACGTCGGCACCCTCAAAGACGGACCTGGAGATGGATGCCAAGCTGGAG
GCGTTCATGGACGGCAACGTTCCCGTCATGACGAGCGCCGACCTCCGCAG
GAGGGAGCAGGTGCTCGGCAGGATCCGAGCAACGTTTCTCCAGATGGCTG
GTAGAGGGCTCAGCGGTGCCCCCGCTGCCGGGGCGGCCGGCGGCAAGCCT
AGAGCGCCGGGGCACGTTCCCAGGCCCATGTACGAGCCCATCAACACGTC
GGCACCCTCAAAGACGGACCTGGAGATGGATGCCAAGCTGGAGGCGTTCA
TGGACGGCAACGTTCCCGTCATGACGAGCGCCGACCTCCGCAGGAGGGAG
CAGGTGCTCGGCAGGATCCGAGCAACGTTTCTCCAGTGGGTCATCGACTC
GGCGTTGGAAGCGGGGATGTCAGAGGAAGCAGCCAAGGCCGCCGGCGGCA
AGATCTACACGTCCGGGTCTTACCGCCTGCGAATACACGAGCCCAAGTCC
GATATCGACGCTATCTGCGTCGCTCCCCAGTGGGTCATCGACTCGGCGTT
GGAAGCGGGGATGTCAGAGGAAGCAGCCAAGGCCGCCGGCGGCAAGATCT
ACACGTCCGGGTCTTACCGCCTGCGAATACACGAGCCCAAGTCCGATATC
GACGCTATCTGCGTCGCTCCCCAGTTTTGTACGTCGGAGCTCTTTTTCAC
GACCCTGAAGGAGAGGATAATCGCGAACCCCCTCGTGACCAACGTGAACG
CCATCGAGACTGCCGCGTTTTGTACGTCGGAGCTCTTTTTCACGACCCTG
AAGGAGAGGATAATCGCGAACCCCCTCGTGACCAACGTGAACGCCATCGA
GACTGCCGCGGTACCCATCATTGAGTTCGTATTCGACGATATCGACATCG
ACTTGGGCCTCGCCTGCCTGCCGGTGCCCACGGTACCTCCGACCCTAGAC
ATCGACGACGACCAGGTACCCATCATTGAGTTCGTATTCGACGATATCGA
CATCGACTTGGGCCTCGCCTGCCTGCCGGTGCCCACGGTACCTCCGACCC
TAGACATCGACGACGACCAGGTGCCGAACTACGAATCCTTTCTGCCGGTG
GTGAGGTGCGTCCGCAGGTGGGCCAAGGCTCGAGGCCTGTACAGCAACAA
GATGGGCTACCTGGGGGGGGTCAATTTCAACATCATGGTGGCGTTCGCGT
GCCAGGTGCCGAACTACGAATCCTTTCTGCCGGTGGTGAGGTGCGTCCGC
AGGTGGGCCAAGGCTCGAGGCCTGTACAGCAACAAGATGGGCTACCTGGG
GGGGGTCAATTTCAACATCATGGTGGCGTTCGCGTGCCAGATGTACCCGA
ACGCCGGGCCATCGACCCTACTGCACCGGTTCTTCAAGCTCATGGCCGGG
TGGAACTGGCCCAACGCCATCCAGCTCGTGCAGCCCTACGACGCTGGGCT
CGGGCTGGAGATGTACCCGAACGCCGGGCCATCGACCCTACTGCACCGGT
TCTTCAAGCTCATGGCCGGGTGGAACTGGCCCAACGCCATCCAGCTCGTG
CAGCCCTACGACGCTGGGCTCGGGCTGGAGGTGTGGAACGCTCGAGCGAA
CAGCTGGCACTGCATGCCCATCATCACTCCCGCCTACCCCGTCATGAACT
CCTCGGCAAACGTTTCCAGGCGCGATTGGTGTGGAACGCTCGAGCGAACA
GCTGGCACTGCATGCCCATCATCACTCCCGCCTACCCCGTCATGAACTCC
TCGGCAAACGTTTCCAGGCGCGATTGGTTTACACTGGACGTGATGACTTC
GGAGTTCTCCAGGGGGCTCGAGGTTTACACTGGACGTGATGACTTCGGAG
TTCTCCAGGGGGCTCGAGGTTGTAAACGGGATCATGAAGGAGAAGGGCTC
TCTCTCGGCCTTTTCGAAGCTGTTCGAGCCCTCGGACTTCTTCATCAGGT
GAGTTGTAAACGGGATCATGAAGGAGAAGGGCTCTCTCTCGGCCTTTTCG
AAGCTGTTCGAGCCCTCGGACTTCTTCATCAGGTGA
back to top