prot_L-elsbetiae_contig6135.14701.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6135.14701.1
Unique Nameprot_L-elsbetiae_contig6135.14701.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length77
Homology
BLAST of mRNA_L-elsbetiae_contig6135.14701.1 vs. uniprot
Match: D8LB85_ECTSI (Protein RER1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB85_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 5.530e-46
Identity = 72/77 (93.51%), Postives = 76/77 (98.70%), Query Frame = 0
Query:    1 RPFSRRLPEFQFWLSSQKGVLMAFGMTFFNIFDIPVFWPILLVYFIVLMFLTMKRQVKHMIKHKYVPWNWGKAKYKG 77
            RPFSRRLPEFQFWLSSQKG+LMAFGMTFF++FDIPVFWPILL+YFIVLMFLTMKRQVKHMIKHKYVPWNWGKA YKG
Sbjct:   96 RPFSRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATYKG 172          
BLAST of mRNA_L-elsbetiae_contig6135.14701.1 vs. uniprot
Match: A0A7S3K339_9STRA (Protein RER1 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K339_9STRA)

HSP 1 Score: 129 bits (324), Expect = 3.960e-36
Identity = 60/75 (80.00%), Postives = 70/75 (93.33%), Query Frame = 0
Query:    1 RPFSRRLPEFQFWLSSQKGVLMAFGMTFFNIFDIPVFWPILLVYFIVLMFLTMKRQVKHMIKHKYVPWNWGKAKY 75
            RPFSRR+PEF+FW SS KGVL+AF MTFF+ FDIPVFWPILL+Y+I L+FLTMKRQ+KHMIKHKYVPW++GKAKY
Sbjct:  107 RPFSRRVPEFKFWYSSTKGVLIAFVMTFFSFFDIPVFWPILLLYWIALVFLTMKRQIKHMIKHKYVPWSYGKAKY 181          
BLAST of mRNA_L-elsbetiae_contig6135.14701.1 vs. uniprot
Match: A0A7S2W0T1_9STRA (Protein RER1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0T1_9STRA)

HSP 1 Score: 122 bits (305), Expect = 2.140e-33
Identity = 55/77 (71.43%), Postives = 63/77 (81.82%), Query Frame = 0
Query:    1 RPFSRRLPEFQFWLSSQKGVLMAFGMTFFNIFDIPVFWPILLVYFIVLMFLTMKRQVKHMIKHKYVPWNWGKAKYKG 77
            RPF RRLPEF+FWL+S + V ++F MTFF IFDIPVFWPILL+YF  L F TMKRQ+ HMIKHKYVPW WGK +Y G
Sbjct:  103 RPFRRRLPEFKFWLASARAVCLSFFMTFFQIFDIPVFWPILLLYFFALFFFTMKRQIMHMIKHKYVPWTWGKRRYTG 179          
BLAST of mRNA_L-elsbetiae_contig6135.14701.1 vs. uniprot
Match: F0YLH9_AURAN (Protein RER1 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLH9_AURAN)

HSP 1 Score: 118 bits (295), Expect = 4.880e-32
Identity = 55/75 (73.33%), Postives = 64/75 (85.33%), Query Frame = 0
Query:    1 RPFSRRLPEFQFWLSSQKGVLMAFGMTFFNIFDIPVFWPILLVYFIVLMFLTMKRQVKHMIKHKYVPWNWGKAKY 75
            +PFSRR+PEF+FW SS KGV++AF MTFF+I   PVFWPILL+YF  L FLTMKRQ+KHMIKHKYVPW+WGK  Y
Sbjct:   90 KPFSRRVPEFKFWYSSTKGVVVAFFMTFFSI---PVFWPILLIYFFALFFLTMKRQIKHMIKHKYVPWSWGKKSY 161          
BLAST of mRNA_L-elsbetiae_contig6135.14701.1 vs. uniprot
Match: A0A7R9YCX7_9STRA (Protein RER1 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCX7_9STRA)

HSP 1 Score: 118 bits (295), Expect = 6.590e-32
Identity = 54/77 (70.13%), Postives = 66/77 (85.71%), Query Frame = 0
Query:    1 RPFSRRLPEFQFWLSSQKGVLMAFGMTFFNIFDIPVFWPILLVYFIVLMFLTMKRQVKHMIKHKYVPWNWGKAKYKG 77
            RPF RRLPEFQFW S  KG++  F MTFF++FD+PVFWPILL+YFIVL  LTMKRQ++HMIK+KYVP++WGK K+ G
Sbjct:  103 RPFERRLPEFQFWYSCIKGLVYCFMMTFFSVFDVPVFWPILLIYFIVLFSLTMKRQIQHMIKYKYVPFSWGKPKHTG 179          
BLAST of mRNA_L-elsbetiae_contig6135.14701.1 vs. uniprot
Match: A0A8J2X2Q3_9STRA (Protein RER1 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X2Q3_9STRA)

HSP 1 Score: 118 bits (295), Expect = 7.540e-32
Identity = 56/79 (70.89%), Postives = 65/79 (82.28%), Query Frame = 0
Query:    1 RPFSRRLPEFQFWLSSQKGVLMAFGMTFFNIFDIPVFW----PILLVYFIVLMFLTMKRQVKHMIKHKYVPWNWGKAKY 75
            +PFSRR+PEF+FW +S KGV  AF MTFF+IFD+PVFW    PILLVYF  L FLTMKRQ+KHMIKH+YVPW+WGK  Y
Sbjct:  102 KPFSRRVPEFKFWYTSIKGVCTAFFMTFFSIFDVPVFWHSAVPILLVYFFALFFLTMKRQIKHMIKHEYVPWSWGKKSY 180          
BLAST of mRNA_L-elsbetiae_contig6135.14701.1 vs. uniprot
Match: UPI0018D8CF0D (protein RER1-like isoform X1 n=2 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D8CF0D)

HSP 1 Score: 117 bits (293), Expect = 1.820e-31
Identity = 52/77 (67.53%), Postives = 68/77 (88.31%), Query Frame = 0
Query:    1 RPFSRRLPEFQFWLSSQKGVLMAFGMTFFNIFDIPVFWPILLVYFIVLMFLTMKRQVKHMIKHKYVPWNWGKAKYKG 77
            RPF RRLPEF+FWLS+ K VL+A   TFF++FD+PVFWPIL++YFI+L  LTMKRQ+KHM+K++Y+PW+ GKAKY+G
Sbjct:  113 RPFIRRLPEFKFWLSATKAVLVAMFCTFFDVFDVPVFWPILVMYFIILFSLTMKRQIKHMVKYRYLPWSHGKAKYRG 189          
BLAST of mRNA_L-elsbetiae_contig6135.14701.1 vs. uniprot
Match: A0A7S2V805_9STRA (Protein RER1 n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V805_9STRA)

HSP 1 Score: 117 bits (293), Expect = 2.970e-31
Identity = 54/76 (71.05%), Postives = 64/76 (84.21%), Query Frame = 0
Query:    1 RPFSRRLPEFQFWLSSQKGVLMAFGMTFFNIFDIPVFWPILLVYFIVLMFLTMKRQVKHMIKHKYVPWNWGKAKYK 76
            RPF+RRLPEF+FWL+  +G L    MTFF+IFD+PVFWPILL+YF VL F+TMKRQ+ HM KHKYVP +WGKAKYK
Sbjct:  125 RPFARRLPEFKFWLACTRGALTCIVMTFFSIFDVPVFWPILLLYFFVLFFMTMKRQIIHMYKHKYVPISWGKAKYK 200          
BLAST of mRNA_L-elsbetiae_contig6135.14701.1 vs. uniprot
Match: A0A0L0FAM3_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FAM3_9EUKA)

HSP 1 Score: 114 bits (285), Expect = 3.360e-31
Identity = 50/77 (64.94%), Postives = 64/77 (83.12%), Query Frame = 0
Query:    1 RPFSRRLPEFQFWLSSQKGVLMAFGMTFFNIFDIPVFWPILLVYFIVLMFLTMKRQVKHMIKHKYVPWNWGKAKYKG 77
            +PF RRLPEF+FWLS+ KGV  A   +FF +FD+PVFWPIL++YF++L  +TMKRQ+KHM+KHKY+PWN GK KY G
Sbjct:   34 KPFVRRLPEFKFWLSAMKGVFTAIFCSFFKVFDVPVFWPILVLYFLILFTVTMKRQIKHMVKHKYLPWNVGKKKYGG 110          
BLAST of mRNA_L-elsbetiae_contig6135.14701.1 vs. uniprot
Match: A0A8B7Y9X8_ACAPL (Protein RER1 n=2 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y9X8_ACAPL)

HSP 1 Score: 116 bits (291), Expect = 4.380e-31
Identity = 53/77 (68.83%), Postives = 66/77 (85.71%), Query Frame = 0
Query:    1 RPFSRRLPEFQFWLSSQKGVLMAFGMTFFNIFDIPVFWPILLVYFIVLMFLTMKRQVKHMIKHKYVPWNWGKAKYKG 77
            RPF RRLPEF+FWLS+ K VL+A   TFF +FD+PVFWPIL++YFI+L  LTMKRQ+KHM+K+KY+PW  GKAKY+G
Sbjct:  120 RPFIRRLPEFKFWLSATKAVLVATFCTFFEVFDVPVFWPILVMYFIILFCLTMKRQIKHMVKYKYLPWTRGKAKYRG 196          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6135.14701.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB85_ECTSI5.530e-4693.51Protein RER1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A7S3K339_9STRA3.960e-3680.00Protein RER1 n=1 Tax=Aureoumbra lagunensis TaxID=4... [more]
A0A7S2W0T1_9STRA2.140e-3371.43Protein RER1 n=1 Tax=Rhizochromulina marina TaxID=... [more]
F0YLH9_AURAN4.880e-3273.33Protein RER1 n=1 Tax=Aureococcus anophagefferens T... [more]
A0A7R9YCX7_9STRA6.590e-3270.13Protein RER1 n=1 Tax=Pinguiococcus pyrenoidosus Ta... [more]
A0A8J2X2Q3_9STRA7.540e-3270.89Protein RER1 n=1 Tax=Pelagomonas calceolata TaxID=... [more]
UPI0018D8CF0D1.820e-3167.53protein RER1-like isoform X1 n=2 Tax=Patiria minia... [more]
A0A7S2V805_9STRA2.970e-3171.05Protein RER1 n=1 Tax=Amphiprora paludosa TaxID=265... [more]
A0A0L0FAM3_9EUKA3.360e-3164.94Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A8B7Y9X8_ACAPL4.380e-3168.83Protein RER1 n=2 Tax=Acanthaster planci TaxID=1334... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004932Retrieval of early ER protein Rer1PFAMPF03248Rer1coord: 1..76
e-value: 2.5E-36
score: 125.0
IPR004932Retrieval of early ER protein Rer1PANTHERPTHR10743PROTEIN RER1coord: 1..77
NoneNo IPR availablePANTHERPTHR10743:SF0PROTEIN RER1coord: 1..77
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..53
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 54..77
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..35
NoneNo IPR availableTMHMMTMhelixcoord: 31..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6135contigL-elsbetiae_contig6135:1061..1932 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6135.14701.1mRNA_L-elsbetiae_contig6135.14701.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6135 1061..1932 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6135.14701.1 ID=prot_L-elsbetiae_contig6135.14701.1|Name=mRNA_L-elsbetiae_contig6135.14701.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=77bp
RPFSRRLPEFQFWLSSQKGVLMAFGMTFFNIFDIPVFWPILLVYFIVLMF
LTMKRQVKHMIKHKYVPWNWGKAKYKG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004932Rer1