mRNA_L-elsbetiae_contig61.14646.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig61.14646.1
Unique NamemRNA_L-elsbetiae_contig61.14646.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig61.14646.1 vs. uniprot
Match: D7G4S4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4S4_ECTSI)

HSP 1 Score: 405 bits (1041), Expect = 2.400e-134
Identity = 207/255 (81.18%), Postives = 231/255 (90.59%), Query Frame = 2 
Query:   47 MRTISTFAVAAMAGTA--VAFAPPSTQLRPVNVNARSNSALKMVYIPDGLSPAEWKKIKDEEKKKKENLGKMGPSRFKSRSFQAWQESGAGHLFPVDPKKVKSGEIPMDKVPYMQRGGAWDNSDLVTKKGKESMKKKTEKVVFNNKVSKGVEKKAWSKTDKEYAAGGFLKEQSISIFGGTPLPWVS-TPQKSPGVEMDNKRRLGVQSKVKRAATNAPMSAAVKRRVEKEAAEERKKQERLKNQLNGEKKGLFGLW 802
            MRT+STFAVAA+AGT+  VAFAPPS  LRPV   + S++ALKMVYIPDGLSPAEWKKIKD +KKK+ENLGK+GPSRFKSRSFQAWQESGAGHLFPVDPKKVKSGEIPMDKVPYMQRGGAWDNSDL +KKG+ +M+ + +KVV NNKVSKGV++KAWS TDK YAAGG+ KEQS+SIFGGTPLPWVS   QKSPGVE+DNKRR+  Q KVKRAATNAPMSAAVKRRVEKEAAEER+KQE+LK QLNGEKKGLFG+W
Sbjct:    1 MRTVSTFAVAALAGTSSVVAFAPPSAPLRPVTTRSSSSAALKMVYIPDGLSPAEWKKIKDADKKKQENLGKLGPSRFKSRSFQAWQESGAGHLFPVDPKKVKSGEIPMDKVPYMQRGGAWDNSDLTSKKGQAAMRARKDKVVLNNKVSKGVKQKAWSSTDKAYAAGGYKKEQSVSIFGGTPLPWVSGAAQKSPGVEVDNKRRINEQKKVKRAATNAPMSAAVKRRVEKEAAEERRKQEKLKKQLNGEKKGLFGMW 255
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BLAST of mRNA_L-elsbetiae_contig61.14646.1 vs. uniprot
Match: A0A7S2US33_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US33_9STRA)

HSP 1 Score: 175 bits (443), Expect = 1.040e-46
Identity = 97/175 (55.43%), Postives = 122/175 (69.71%), Query Frame = 2 
Query:   71 VAAMAGTAVAFAPPS-TQLRPVNVNARSNSALKMVYIPDGLSPAEWKKIKDEEKKKKENLGKMGPSRFKSRSFQAWQESGAGHLFPVDPKKVKSGEIPMDKVPYMQRGGAWDNSDLVTKKGKESMKKKTEKVVFNNKVSKGVEKKAWSKTDKEYAAGGFLKEQSISIFGGTPLPW 592
            ++A+ G A AF P +   L PV    R+ + L+M Y+P+GL+P +WKKI++++K K  NLG+MGP RFKSRSF AWQ +G  HLFPVDPKKVK+GEI M  VPYMQRGGAWDNSDL+ KKG+++ K               VE   WS  DK+YAAGGF KEQS+SIFGG  +PW
Sbjct:   11 ISALLGIAQAFIPNAGLGLSPV----RTCTPLRMGYVPEGLTPEQWKKIQEKDKAKG-NLGEMGPKRFKSRSFAAWQAAGGKHLFPVDPKKVKTGEIAMKDVPYMQRGGAWDNSDLI-KKGEKAPK---------------VE---WSDRDKQYAAGGFRKEQSVSIFGGVSMPW 161
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BLAST of mRNA_L-elsbetiae_contig61.14646.1 vs. uniprot
Match: A0A836CGF0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGF0_9STRA)

HSP 1 Score: 161 bits (408), Expect = 1.200e-41
Identity = 111/246 (45.12%), Postives = 141/246 (57.32%), Query Frame = 2 
Query:   86 GTAVAFAPPSTQLRPVNVNARSNSALKMVYIPDGLSPAEWKKIKDEEKKK-KENLGKMGPSRFKSRSFQAWQES----GAGHLFPVDPKKVKSGEIPMDKVPYMQRGGAWDNSDLVTKKGKESMKKKTEKVVFNNKVSKGVEKKAWSKTDKEYAAGGFLKEQSISIFG-GTPLPWVSTPQKSPGVEMDNKRRLGVQSKVKRAAT-NAPMSAAVKRRVEKEAAE---ERKKQERLKNQLNGEKKGLF 793
            G A + A P+   RP      + S+L M YIPDGL+P +WK IK++E++K  +NLG++G + FKSRSFQAWQE+      GHLFPVDP KVK GEIP+ KVPYMQRGG+WD+ DLV K+                   KG++KK WS  DK YA GG    QSI+IFG G  LPW           +D    L  Q+K KRA +  AP +     RVEKE A+   ER K+E+  +    E K  F
Sbjct:   19 GFAPSAALPAALARP------ATSSLSMAYIPDGLTPEQWKVIKEKEQEKASKNLGRVGATSFKSRSFQAWQEAMERGEGGHLFPVDPVKVKRGEIPLSKVPYMQRGGSWDDEDLVKKE-------------------KGIKKKEWSPLDKAYATGGERANQSINIFGRGANLPWNGRAAFKDPKAIDP---LKEQAKWKRATSVTAPPNKMALARVEKEKAKLEAERLKKEQALSPTLKENKRFF 236
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BLAST of mRNA_L-elsbetiae_contig61.14646.1 vs. uniprot
Match: A0A6S9GSP2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GSP2_HETAK)

HSP 1 Score: 152 bits (384), Expect = 1.830e-38
Identity = 90/179 (50.28%), Postives = 121/179 (67.60%), Query Frame = 2 
Query:   98 AFAPPSTQLRPVNVNARSNSALKMV-YIPDGLSPAEWKKIKDEEKKKKENLGKMGPSRFKSRSFQAWQESGAGHLFPVDPKKVKSGEIPMDKVPYMQRGGAWDNSDLVTKKGKESMKKKTEKVVFNNKVSKGVEKKAWSKTDKEYAAGGFLKEQSISIFGGTPLPWVSTPQKSPGVEMD 631
            AF P + +L  V    R+ S ++M  Y+PDGLS  ++ KIK EE +K +NLGK+GP+RFKSRSF  W  +G  HLFPVDP+KVKSGEI ++ VPYMQR GAWDNSDL   KG ++++ K       NK++  V+K   +K++ EY  GGF KEQS+SIFGG  +PW    QK   +++D
Sbjct:   20 AFLPSAQRLSVV----RNESNVQMKGYVPDGLSAEQYAKIKKEEAEKLKNLGKVGPNRFKSRSFADWHAAGGKHLFPVDPRKVKSGEIAIEDVPYMQRKGAWDNSDL---KGNKNVRDK-------NKLN--VQK---TKSEVEYEKGGFRKEQSVSIFGGRNMPWT---QKYEAMDVD 176
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BLAST of mRNA_L-elsbetiae_contig61.14646.1 vs. uniprot
Match: A0A835ZE56_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE56_9STRA)

HSP 1 Score: 151 bits (381), Expect = 6.670e-38
Identity = 104/251 (41.43%), Postives = 144/251 (57.37%), Query Frame = 2 
Query:   71 VAAMAGTAVAFAPPSTQLRPVNVNARSNSALKMVYIPDGLSPAEWKKIKDEEKKK-KENLGKMGPSRFKSRSFQAWQ---ESG-AGHLFPVDPKKVKSGEIPMDKVPYMQRGGAWDNSDLVTKKGKESMKKKTEKVVFNNKVSKGVEKKAWSKTDKEYAAGGFLKEQSISIFG-GTPLPWVSTPQKSPGVEMDNKRRLGVQSKVKRAATNAPMSAAVKRRVEKE----AAEERKKQERLKNQLNGEKKGLF 793
            V A+    +AFAP +     +   A S   + M YIPDGL+ A+W  IK++E+ K  +NLG++G + FKSRSFQAWQ   E+G  GHLFPVDP+KVK+GEI + +VPYMQR G+WD+ DL+ K+                   KG++KKAW+ TDK YA GG   +QS++IFG G  LPW           +D  +    Q+K +RA +  P +     RV KE    AA++ KK++ L   L   K+ LF
Sbjct:   14 VLALVNATLAFAPGAA----LPSCATSTCQVTMRYIPDGLTQAQWDAIKEKEQAKASKNLGRVGATSFKSRSFQAWQQAMENGEGGHLFPVDPRKVKTGEIKLSEVPYMQRRGSWDDEDLLKKE-------------------KGIQKKAWTPTDKAYADGGERAQQSVNIFGTGANLPWNGRAAFKDPTAVDPIKE---QAKWRRATSPLPPNKMALERVAKEKAKLAAQQAKKEKELAPTLVEGKRFLF 238
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BLAST of mRNA_L-elsbetiae_contig61.14646.1 vs. uniprot
Match: D7FWZ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWZ5_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 3.630e-33
Identity = 74/128 (57.81%), Postives = 84/128 (65.62%), Query Frame = 2 
Query:  161 LKMVYIPDGLSPAEWKKIKDEE---KKKKENLGKMGPSRFKSRSFQAWQESGAGHLFPVDPKKVKSGEIPMDKVPYMQRGGAWDNSDLVTKKGKESMKKKTEKVVFNNKVSKGVEKKAWSKTDKEYAA 535
            L M Y+PDGLSP +WKK++ EE   KKK  +LG++G   FKSRS QAWQE GAGHLFPVDPKKVKSGEIP +K PYMQR GAWDNSDL                       K ++KK WS TDK YAA
Sbjct:   63 LDMKYVPDGLSPEQWKKMQKEEAEKKKKMGDLGQVGVKSFKSRSLQAWQEDGAGHLFPVDPKKVKSGEIPPEKTPYMQRKGAWDNSDL---------------------AKKNLQKK-WSATDKAYAA 168
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BLAST of mRNA_L-elsbetiae_contig61.14646.1 vs. uniprot
Match: A0A1Z5KB69_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KB69_FISSO)

HSP 1 Score: 131 bits (330), Expect = 3.060e-31
Identity = 73/156 (46.79%), Postives = 97/156 (62.18%), Query Frame = 2 
Query:  173 YIPDGLSPAEWKKIKDEEKKK--KENLGKMGPSRFKSRSFQAWQES----GAGHLFPV--DPKKVKSGEIPMDKVPYMQRGGAWDNSDLVTKKGKESMKKKTEKVVFNNKVSKGVEKKAWSKTDKEYAAGGFLKEQSISIFG-GTPLPWVSTPQKS 613
            Y+PDG +P  +KK K+EE+KK  K+NLG++GP  FKSRSFQ++QE+     A HL PV    ++VK GE+  + +PYMQRGG+WDNSD+                       KG +K  W ++DKEYA GG+LKEQS+SIFG G  L W  T  +S
Sbjct:   38 YVPDGFTPESYKKFKEEERKKNEKKNLGRVGPKGFKSRSFQSFQEALERGEATHLLPVMNAKERVKKGELKWEDIPYMQRGGSWDNSDV-----------------------KGAKKVRWLQSDKEYANGGYLKEQSVSIFGYGQGLDWTGTRSRS 170
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BLAST of mRNA_L-elsbetiae_contig61.14646.1 vs. uniprot
Match: A0A7S1D0M1_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D0M1_CYCTE)

HSP 1 Score: 127 bits (320), Expect = 6.520e-30
Identity = 87/206 (42.23%), Postives = 112/206 (54.37%), Query Frame = 2 
Query:    2 VDTHASQAIPIDDIKMRTISTFAVAAMAGTAVAFAPPSTQLRPVNVNARSNSALKMVYIPDGLSPAEWKKIKDEEKKK--KENLGKMGPSRFKSRSFQAWQES----GAGHLFPV--DPKKVKSGEIPMDKVPYMQRGGAWDNSDLVTKKGKESMKKKTEKVVFNNKVSKGVEKKAWSKTDKEYAAGGFLKEQSISIFG-GTPLPW 592
            V     +AI     KMRT +   +AA+A    AF  P        +NA   S     Y+P G +P ++KK K+EEKKK  K+NLG++GP  F+SRSFQ++QE+     A HL PV    +KV  GEI  + VPYMQRGG+WDNSD+                       KG +KK W  +DK YA GG+ KEQS+SIFG G  L W
Sbjct:   11 VHIRDDKAIFSPSTKMRT-AVLLIAAIASGVGAFQAP-------RLNAVRLSTAVHGYVPSGFTPEQYKKFKEEEKKKMQKQNLGRLGPKGFQSRSFQSFQEALERGEAKHLLPVFNAKEKVARGEIRPEDVPYMQRGGSWDNSDV-----------------------KGAKKKRWLSSDKSYADGGYKKEQSVSIFGYGEGLDW 185
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BLAST of mRNA_L-elsbetiae_contig61.14646.1 vs. uniprot
Match: A0A7R9WG43_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WG43_9STRA)

HSP 1 Score: 126 bits (316), Expect = 3.850e-29
Identity = 76/196 (38.78%), Postives = 110/196 (56.12%), Query Frame = 2 
Query:   38 DIKMRTISTFAVAAMAGTAVAFAPPSTQLRPVNVNARSNSALKMVYIPDGLSPAEWKKIKDEEKKKKE-NLGKMGPSRFKSRSFQAWQES----GAGHLFPV--DPKKVKSGEIPMDKVPYMQRGGAWDNSDLVTKKGKESMKKKTEKVVFNNKVSKGVEKKAWSKTDKEYAAGGFLKEQSISIFG-GTPLPWVST 601
            +IKM+T S+  +AA+A  A+ F   S Q   ++    S+  +   YIP G +   W+K + +EK KK+ NLG++GP  F+SRS Q++QE+     A HL PV    +++  GE+  + +PYMQRGG WD+SD+                       KG +KK W  +DKEYA+GGF +EQS+SI G G  L W  T
Sbjct:   18 NIKMKTSSSACIAAVAFVAMCFGVESLQTPRLSTERSSSIVVTYGYIPSGFTKESWEKFQKKEKAKKQGNLGRVGPKGFQSRSMQSFQEALERGEAAHLLPVFNARERIAKGELKEEDIPYMQRGGNWDDSDV-----------------------KGAKKKRWLASDKEYASGGFKREQSVSILGSGAGLDWTGT 190
[Close]
BLAST of mRNA_L-elsbetiae_contig61.14646.1 vs. uniprot
Match: A0A7S2A3R3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A3R3_TRICV)

HSP 1 Score: 123 bits (308), Expect = 2.860e-28
Identity = 78/208 (37.50%), Postives = 111/208 (53.37%), Query Frame = 2 
Query:   32 IDDIKMRTISTFAVAAMAGTAVAFAPPSTQLRPVNVNARSNSALKMVYIPDGLSPAEWKKIKDEEKKKKENLGKMGPSRFKSRSFQAWQES----GAGHLFPV--DPKKVKSGEIPMDKVPYMQRGGAWDNSDLVTKKGKESMKKKTEKVVFNNKVSKGVEKKAWSKTDKEYAAGGFLKEQSISIFG-GTPLPWVST-----PQKSPG 619
            ++  K   ++ FA+AAM     +F     Q   ++    S   +   YIP G +  +W+K + +EK KK NLG+MGP  F+SRS Q++QE+     A HL PV    +KV   ++  + +PYMQRGGAWDNSD+                       KG +KK W  +DK+YA+GGF KEQS+SIFG G  L W  +     P+ +PG
Sbjct:    2 VNATKRAYLAAFALAAMCADVHSF-----QTTRLSTERTSAKVVTYGYIPSGFTKEQWEKFQKKEKVKKANLGRMGPKGFQSRSMQSFQEALERGEAKHLMPVFNAKEKVAKRQLRQEDIPYMQRGGAWDNSDV-----------------------KGSKKKRWLDSDKQYASGGFRKEQSVSIFGYGEGLDWTGSKSKRGPESAPG 181
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig61.14646.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4S4_ECTSI2.400e-13481.18Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2US33_9STRA1.040e-4655.43Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CGF0_9STRA1.200e-4145.12Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6S9GSP2_HETAK1.830e-3850.28Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835ZE56_9STRA6.670e-3841.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FWZ5_ECTSI3.630e-3357.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1Z5KB69_FISSO3.060e-3146.79Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S1D0M1_CYCTE6.520e-3042.23Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A7R9WG43_9STRA3.850e-2938.78Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2A3R3_TRICV2.860e-2837.50Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig61contigL-elsbetiae_contig61:60925..64827 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score408.7
Seed ortholog evalue2e-111
Seed eggNOG ortholog2880.D7G4S4
Hectar predicted targeting categorychloroplast
EggNOG OGs2D1KJ@1,2S4WB@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-20_000570.1
Exons4
Model size2157
Cds size759
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig61.14646.1prot_L-elsbetiae_contig61.14646.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig61 60971..63475 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816667.1204126-UTR-L-elsbetiae_contig61:60924..609701622816667.1204126-UTR-L-elsbetiae_contig61:60924..60970Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig61 60925..60970 +
1691683725.4730332-UTR-L-elsbetiae_contig61:60924..609701691683725.4730332-UTR-L-elsbetiae_contig61:60924..60970Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig61 60925..60970 +
1622816667.1835852-UTR-L-elsbetiae_contig61:63475..648271622816667.1835852-UTR-L-elsbetiae_contig61:63475..64827Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig61 63476..64827 +
1691683725.5244045-UTR-L-elsbetiae_contig61:63475..648271691683725.5244045-UTR-L-elsbetiae_contig61:63475..64827Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig61 63476..64827 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816667.1354718-CDS-L-elsbetiae_contig61:60970..612131622816667.1354718-CDS-L-elsbetiae_contig61:60970..61213Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig61 60971..61213 +
1691683725.4847152-CDS-L-elsbetiae_contig61:60970..612131691683725.4847152-CDS-L-elsbetiae_contig61:60970..61213Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig61 60971..61213 +
1622816667.1470115-CDS-L-elsbetiae_contig61:62134..621851622816667.1470115-CDS-L-elsbetiae_contig61:62134..62185Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig61 62135..62185 +
1691683725.4942555-CDS-L-elsbetiae_contig61:62134..621851691683725.4942555-CDS-L-elsbetiae_contig61:62134..62185Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig61 62135..62185 +
1622816667.1575236-CDS-L-elsbetiae_contig61:62558..627531622816667.1575236-CDS-L-elsbetiae_contig61:62558..62753Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig61 62559..62753 +
1691683725.5061796-CDS-L-elsbetiae_contig61:62558..627531691683725.5061796-CDS-L-elsbetiae_contig61:62558..62753Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig61 62559..62753 +
1622816667.170729-CDS-L-elsbetiae_contig61:63205..634751622816667.170729-CDS-L-elsbetiae_contig61:63205..63475Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig61 63206..63475 +
1691683725.5153089-CDS-L-elsbetiae_contig61:63205..634751691683725.5153089-CDS-L-elsbetiae_contig61:63205..63475Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig61 63206..63475 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig61.14646.1

>prot_L-elsbetiae_contig61.14646.1 ID=prot_L-elsbetiae_contig61.14646.1|Name=mRNA_L-elsbetiae_contig61.14646.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=253bp
MRTISTFAVAAMAGTAVAFAPPSTQLRPVNVNARSNSALKMVYIPDGLSP
AEWKKIKDEEKKKKENLGKMGPSRFKSRSFQAWQESGAGHLFPVDPKKVK
SGEIPMDKVPYMQRGGAWDNSDLVTKKGKESMKKKTEKVVFNNKVSKGVE
KKAWSKTDKEYAAGGFLKEQSISIFGGTPLPWVSTPQKSPGVEMDNKRRL
GVQSKVKRAATNAPMSAAVKRRVEKEAAEERKKQERLKNQLNGEKKGLFG
LW*
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mRNA from alignment at L-elsbetiae_contig61:60925..64827+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig61.14646.1 ID=mRNA_L-elsbetiae_contig61.14646.1|Name=mRNA_L-elsbetiae_contig61.14646.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3903bp|location=Sequence derived from alignment at L-elsbetiae_contig61:60925..64827+ (Laminarionema elsbetiae ELsaHSoW15)
TGTAGACACACACGCTTCACAGGCCATCCCCATCGACGACATCAAGATGC
GCACAATCTCCACATTTGCTGTTGCCGCGATGGCTGGGACTGCCGTTGCA
TTCGCGCCGCCGTCTACCCAGCTGCGACCTGTCAACGTCAACGCTAGGAG
CAACTCAGCGCTCAAGATGGTCTACATCCCAGATGGCCTTTCGCCTGCGG
AGTGGAAGAAGATCAAAGACGAGGAGAAGAAGAAAAAGGAGAACCTCGGC
AAGATGGGACCCTCGAGATTTAAGAGCCGTAGTTTTCAGGTATGCTCGCG
CACAGCGCCGATTTTGAGGAATGAACACTCTTTGGTCTCCATGCAGCTGG
TTTCATGACAACCTATTTTTTCTGCTATTTTTCTATTTTTCTAAGATACA
TGTCGGGTTTGTCCAAGGCACACGCCCTCTCCCACACGCTTGTCCTTTTA
CATTTCCACAACCTTTCTCAGCTGAACTCTCGCTTGTTTCAATGGCATGT
AGACTGCTCTTCAACTATAGCGTGCCTTTTTCCTCTTTTTCGGCCACGTA
GTCTGTTTTTCAATGCCTCGACAAGTTCGCTGCAATTATAGTTTCGCGCC
ACGTACATACTCTGCAAAGCAAATTTGGGTTGCCCACCCTTCGTTTCCCT
GCTCTGTGGTACCTCGGTTTCATACACACATACACAGGCAGAGAAAGTCT
TTTATCAGGAGAAAGTTGGCGCGAAAATGGCAAAAGGAAACACCTCTGTC
ACGCAGTTTGGCACAGGCGCAGAGTGAAGAGAGATAAGAAAGAGAGAGAG
ACCGATGGAAAATCCGACCGCTCAAAAAAAAAAAATGAGCAAGAATCGCC
GCACAACCACCGCTCGTTAAACACCAAGGCGCCACAATTCAAACGTGCCT
GTGTATTATTTTTGAGATTTTAACGATGTGCGTGCACCATCAGTGAAATA
TATGCATCGAAAGGTAAAATGGAGGGAATAGTCCCGGAGTAAGTACACGG
TTCTGGGACCAACTTCGTGTTGCTGGAGCACGCAGGACCTCCACACCAAC
GACCCAGCGTGTGCTCCGTGAACGCCGCAATGGCCGGAGGTGCTGATCGT
CGTGCATGTATCAACTTTTGATGAACGAAGTCACGTGTAAAGCCCTTCTC
ACGTCAACGTTTTTCCATTCTCGCCTGCCCTCGCTGCGAAATGTTCCTCT
TCACGAACAGGCTTGGCAAGAAAGTGGGGCAGGACACCTTTTCCCCGTCG
ACCCCAAGAAGGTAACAACAACCTAAATGGTTATATCGGAGTACGTAAAT
ATGACACGGCCGGGTTGGTGTCTTCCACTCGGTGGAGTGCCTGTCTAGCC
CCATTTTTTCTCATCAGGCTGGGAAATGATCTTCACGGCGGCGAAGTCGG
AATTGCGTCGAGGACAGCTTTGCGAGGTTTTGATTTGATCGTTCATCCAT
TCTGTCATGGGATCCGTCTCCTTTCGCGTAGCTCTTCGTGTCCACTCTAT
TGGCGTCTAATTATCGGTGAAAGGTAGTCACTTGGCGCTGTAACACACTG
GAGAGGAAGCCATTGTACCGGGCAGAAAAGCTTCAGTCATCGGCCGTTCC
TCATCTCTCTGCTCCCACCGTTGTGCTCACTCAGGTCAAGAGCGGGGAAA
TCCCCATGGACAAGGTGCCGTACATGCAGCGAGGAGGGGCGTGGGACAAC
TCGGACCTCGTGACGAAGAAGGGGAAAGAGTCGATGAAAAAGAAGACGGA
GAAGGTGGTCTTTAACAACAAAGTCAGCAAGGGCGTAGAGAAGAAGGCGT
GGAGCAAGACGGACAAGGAGTACGCGGCGGTGAGATTTTTCCCAATGTTT
TTTTTCTGGTGTTGTGTCCGTCTGAGCCGGACCAGCTCCGTAGTTTCAGA
CTGTAGTATAGCTCCCAACGAGTGTGTTAAATCTTGTGCTGGCTACGCTA
ATCACGTCGGAAAACGAAAGCTGTGTGGGCACGAACCAGCGCATGCGGTC
CGGATGTAATATCATCAGTTTCGCCGTCCCAATACCGCACCAACCTGCCA
CATTTTCGTGTTTTTATTGCAGTATCCAGGAGAGACATATGTTCAACTCC
GACGTGTTGTCAGCGGCAATTATACTTCGGTTATTTTATCTGATCAGCCT
TGTCACTTTCGTCGACGCGCGAGGGCGAGGGCGAGTGCAACATCTACGGT
GAGGCGTATTGAAAACCGCCTGGTGGCGAGTTCTCACTCCGTCCGTCGTT
TCGCCACCCGCCGCCGCTCTGACTTTGTCAGGGTGGGTTCTTGAAGGAGC
AGAGCATTTCCATCTTTGGTGGGACTCCTCTTCCATGGGTTTCCACCCCG
CAGAAGTCCCCGGGAGTTGAGATGGACAACAAGCGAAGGCTCGGCGTTCA
GTCGAAGGTGAAGCGGGCTGCTACGAACGCTCCGATGTCCGCGGCCGTGA
AGCGCCGGGTAGAGAAGGAGGCCGCCGAGGAGCGAAAGAAGCAGGAGAGG
CTGAAGAACCAGCTGAACGGCGAGAAGAAGGGGTTGTTCGGACTTTGGTA
GAGAGGAGCTCGGGTCAGCCAATTGGGTGATTTGTGGTTTCATTTTGAGG
ACGTCGGGGCAAACAAGCGAAAAGCGACTTGCCCCCGTCGTGTTTTTGCA
TCGCAGCTGTCGGCTGAGATGGTAGTACGCGGTCCATTTTGTGGCCGCGC
GCGCAATTGAGGTCAATTTTAAGTGGCGCGCAGTGGAGCGTGCAGCTGCA
GACTCTGGGCGGAGTGTGGCCGGTTTTAGGAAAACTGCCGACCAATCTCT
GATTTTTGGACTAGCGAGTGGATTAGACGGGTTTATGAAACTACAACGAT
CTCCACTGCTCGGCGACAATGAGCGAGTCTGTAGCGTCCAAGTTATAGAG
TTAATTCGACCTTTTCTGTGGTGTTTTTTGAAGGAGGCGACGAGGTGAAA
TGAATAATGTTGACCATTTTGAACCCCGAGGGTCGCGCGCGAGGGCCTTT
TAGAGCAGAAAAACATCAAGAATTGGATACTGCTGTTATACAAGGCGTGC
ACGTTAGCTTTGTTGCATGCCTAAATTTTGGCGGGTGGTTGTCTCTGGCG
ACTCACGAGAACCGTTCCCATTTTTCTAAAACATTTTTATGGTTGGGGTT
TGCTCGACTTGTTGTGGACCGTCGGGGGCACGTCTGGCGTGGAACACGGG
GGGGCGGGCTGTAGAGATTTTCGTGTCGGCGCGGGTGTGTTGACCGAGAA
AACCAAAAGTGCGGGTGTAAAAACGGGTCTGATTATTATTCCGAATCGTG
ATGCGAGCTAGGGCGCGGGTAGCTGATTGTATTACATAACATACGAAGAA
ATAATGTGGCGTGTGGGTGAGGGAGGAGGTTGGTGGTTCGGAGAGTTGGG
CAGGAGAAAGTAGCGACTTCCAGCGTCCGGGTGCGTACGTATCTGGTTCA
GACAATCGACCGAGCTTCCCAGTGTTCTTTCAATATCGTACCGACGTCGA
TCTCGTACGAACCTGCAAAGAGAGCTTGGTTGAGCAGGCCACATATATAC
GGGGAGTATGAAGTCTCCATCTCTGCCCTGTTTCCTCTGTTGTCAACGCG
TGCTTGGATACAGCAGTGTTTGATCAAAAACGACTCAGCATCAGCCGTTT
ACATGCAGCCTGCGAAAGACATGGCTCCAGGAGGACCGTTGTTGCAGAGA
CATGGACCCCTCCCTTGCCGCCCCCGACTGCAGCTTTTTTTCTTTTCATT
TGAAACCCCGTCTGTCGACTGTATATATGTTTGCATGTATGTTGTCTTCA
CACTAAAAACCGTTCCGATCTCTCCATCCAGTACCTCCCACCAACACCTG
ATGCGGTCAGAGATCGTCTTGAGCTCGATTTTGTTTTCACCATGTTGCCG
GAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig61:60925..64827+

>mRNA_L-elsbetiae_contig61.14646.1 ID=mRNA_L-elsbetiae_contig61.14646.1|Name=mRNA_L-elsbetiae_contig61.14646.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1518bp|location=Sequence derived from alignment at L-elsbetiae_contig61:60925..64827+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCGCACAATCTCCACATTTGCTGTTGCCGCGATGGCTGGGACTGCCGT
TGCATTCGCGCCGCCGTCTACCCAGCTGCGACCTGTCAACGTCAACGCTA
GGAGCAACTCAGCGCTCAAGATGGTCTACATCCCAGATGGCCTTTCGCCT
GCGGAGTGGAAGAAGATCAAAGACGAGGAGAAGAAGAAAAAGGAGAACCT
CGGCAAGATGGGACCCTCGAGATTTAAGAGCCGTAGTTTTCAGATGCGCA
CAATCTCCACATTTGCTGTTGCCGCGATGGCTGGGACTGCCGTTGCATTC
GCGCCGCCGTCTACCCAGCTGCGACCTGTCAACGTCAACGCTAGGAGCAA
CTCAGCGCTCAAGATGGTCTACATCCCAGATGGCCTTTCGCCTGCGGAGT
GGAAGAAGATCAAAGACGAGGAGAAGAAGAAAAAGGAGAACCTCGGCAAG
ATGGGACCCTCGAGATTTAAGAGCCGTAGTTTTCAGGCTTGGCAAGAAAG
TGGGGCAGGACACCTTTTCCCCGTCGACCCCAAGAAGGCTTGGCAAGAAA
GTGGGGCAGGACACCTTTTCCCCGTCGACCCCAAGAAGGTCAAGAGCGGG
GAAATCCCCATGGACAAGGTGCCGTACATGCAGCGAGGAGGGGCGTGGGA
CAACTCGGACCTCGTGACGAAGAAGGGGAAAGAGTCGATGAAAAAGAAGA
CGGAGAAGGTGGTCTTTAACAACAAAGTCAGCAAGGGCGTAGAGAAGAAG
GCGTGGAGCAAGACGGACAAGGAGTACGCGGCGGTCAAGAGCGGGGAAAT
CCCCATGGACAAGGTGCCGTACATGCAGCGAGGAGGGGCGTGGGACAACT
CGGACCTCGTGACGAAGAAGGGGAAAGAGTCGATGAAAAAGAAGACGGAG
AAGGTGGTCTTTAACAACAAAGTCAGCAAGGGCGTAGAGAAGAAGGCGTG
GAGCAAGACGGACAAGGAGTACGCGGCGGGTGGGTTCTTGAAGGAGCAGA
GCATTTCCATCTTTGGTGGGACTCCTCTTCCATGGGTTTCCACCCCGCAG
AAGTCCCCGGGAGTTGAGATGGACAACAAGCGAAGGCTCGGCGTTCAGTC
GAAGGTGAAGCGGGCTGCTACGAACGCTCCGATGTCCGCGGCCGTGAAGC
GCCGGGTAGAGAAGGAGGCCGCCGAGGAGCGAAAGAAGCAGGAGAGGCTG
AAGAACCAGCTGAACGGCGAGAAGAAGGGGTTGTTCGGACTTTGGTAGGG
TGGGTTCTTGAAGGAGCAGAGCATTTCCATCTTTGGTGGGACTCCTCTTC
CATGGGTTTCCACCCCGCAGAAGTCCCCGGGAGTTGAGATGGACAACAAG
CGAAGGCTCGGCGTTCAGTCGAAGGTGAAGCGGGCTGCTACGAACGCTCC
GATGTCCGCGGCCGTGAAGCGCCGGGTAGAGAAGGAGGCCGCCGAGGAGC
GAAAGAAGCAGGAGAGGCTGAAGAACCAGCTGAACGGCGAGAAGAAGGGG
TTGTTCGGACTTTGGTAG
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