prot_L-elsbetiae_contig599.14497.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig599.14497.1
Unique Nameprot_L-elsbetiae_contig599.14497.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length372
Homology
BLAST of mRNA_L-elsbetiae_contig599.14497.1 vs. uniprot
Match: D7FT56_ECTSI (tRNA-uridine aminocarboxypropyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT56_ECTSI)

HSP 1 Score: 219 bits (559), Expect = 6.160e-64
Identity = 154/286 (53.85%), Postives = 172/286 (60.14%), Query Frame = 0
Query:   57 SAGSLSSALLLRPAH-TPFLAAKRKGLVGLPLGIARQEEERTPADQPVAIEMVASTGRERSKAAQQAYHERKREALSAWSEERQGRDLCERCRRARKMCLCSSLPPRAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLSNCRRIVMRSDYGEDELRKVLGVDAGSADDGGQAGDARGRSPEVSSERSLE---GGVTSRPLLLFPCPGAEFLEDIAAATRQHFASSTPXXXXXXXXXXXXXRPTAAPATSPSTSAPLPPSPSGPMVVLIDGTWSQAKQILSRYPFL 338
            SAG  S AL   P   TPFL  +R                R P     A   +   G +    A Q+Y+ER+REA+ AW+EER+GRDLCERCRRAR+MCLCSSLP  AMPTSTRFVILQHPAETKKRVTGTVPLVLHCL+NC R+VMR DY E +LRK LGV+            A  RSPE  SE S E      T  PLLLFPCPGAE+LEDIAA+  Q   S+ P  XXXXXXXXXXX                          L+DGTWSQAKQILSRYP L
Sbjct:   47 SAGRNSDALFCCPTTLTPFLTVRR----------------RKPRRAACAAREI---GNDAPSQAVQSYYERRREAMGAWTEERRGRDLCERCRRAREMCLCSSLPAEAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLANCTRVVMRYDYSEQDLRKALGVEV-----------AIYRSPERVSEISSERENSASTGIPLLLFPCPGAEYLEDIAASRDQPAPSAQPFPXXXXXXXXXXXXXXXXXXXXXXXXXXX-------XXXLVDGTWSQAKQILSRYPSL 295          
BLAST of mRNA_L-elsbetiae_contig599.14497.1 vs. uniprot
Match: UPI0014027552 (DTW domain-containing protein 2 n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI0014027552)

HSP 1 Score: 71.6 bits (174), Expect = 3.450e-10
Identity = 70/215 (32.56%), Postives = 91/215 (42.33%), Query Frame = 0
Query:  141 RDLCERCRRARKMCLCSSLPPRAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLS--NCRRIVMRSDYGEDELRKVLGVDAGSADDGGQAGDARGRSPEVSSERSLEGGVTSRPLLLFPCPGAEFLEDIAAATRQHFASSTPXXXXXXXXXXXXXRPTAAP----------ATSPSTSA-----PLPPSPSGPM----VVLIDGTWSQAKQILSR 334
            R  C RC R +K+CLC  LP   +  STR  I+QHPAE + RV  TVPL+  CLS  +C  +V R  + ED   ++  V                RSP                L+L+P PGA  L D+  A+    AS+                  A P          A  P+T A     P P S +G +    +VLIDGTW QAK +  R
Sbjct:   66 RATCSRCGRPQKVCLCPFLPAHPLEVSTRLYIVQHPAE-ESRVLRTVPLLAACLSAHSCTVLVGRR-FPEDRFPELAQVC---------------RSPNT--------------LVLYPGPGAVDLYDLVGASSTTCASAARESSGILLGTGDDSPAAAKPGRADALAPCGAVDPTTLADAPRVPTPASVNGAVPLFTLVLIDGTWRQAKDMFER 249          
BLAST of mRNA_L-elsbetiae_contig599.14497.1 vs. uniprot
Match: A0A7S3RJQ7_EMIHU (tRNA-uridine aminocarboxypropyltransferase (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RJQ7_EMIHU)

HSP 1 Score: 68.9 bits (167), Expect = 1.360e-9
Identity = 68/200 (34.00%), Postives = 90/200 (45.00%), Query Frame = 0
Query:  141 RDLCERCRR-ARKMCLCSSLPPRAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLSNCRRIVMRSDYGEDELRKVLGVDAGSADDGGQAGDARGRSPEVSSERSLEGGVTSRPLLLFPCPGAEFLEDIAAATRQHFASSTPXXXXXXXXXXXXXRPTAAPATSPSTSAPLPPSPSGPMVVLIDGTWSQAKQILSRYPFLS 339
            R +C RCRR AR+ C+C+ LPP  +   TR +ILQHP E++K +   VPL+  C                 LR+   V A    + G    A G  P    +RS+  G    PLLLFP  GA  L D AA   Q  ASS               + ++A   S      L        +VLIDGTWSQA+ ++   P L+
Sbjct:   50 RSVCRRCRRPARQHCVCAELPPAPIAVQTRVLILQHPRESRKAMCS-VPLIPLC-----------------LREAEVVQAPMPFEAGSCFTAEGLEP---LQRSIREGY--EPLLLFPGEGAVPL-DAAAGWPQPRASS---------------KQSSATRRSRERRRKL--------LVLIDGTWSQARAMMRHSPSLA 202          
BLAST of mRNA_L-elsbetiae_contig599.14497.1 vs. uniprot
Match: R1BXS1_EMIHU (tRNA-uridine aminocarboxypropyltransferase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BXS1_EMIHU)

HSP 1 Score: 68.9 bits (167), Expect = 4.920e-9
Identity = 68/200 (34.00%), Postives = 90/200 (45.00%), Query Frame = 0
Query:  141 RDLCERCRR-ARKMCLCSSLPPRAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLSNCRRIVMRSDYGEDELRKVLGVDAGSADDGGQAGDARGRSPEVSSERSLEGGVTSRPLLLFPCPGAEFLEDIAAATRQHFASSTPXXXXXXXXXXXXXRPTAAPATSPSTSAPLPPSPSGPMVVLIDGTWSQAKQILSRYPFLS 339
            R +C RCRR AR+ C+C+ LPP  +   TR +ILQHP E++K +   VPL+  C                 LR+   V A    + G    A G  P    +RS+  G    PLLLFP  GA  L D AA   Q  ASS               + ++A   S      L        +VLIDGTWSQA+ ++   P L+
Sbjct:   28 RSVCRRCRRPARQHCVCAELPPAPIAVQTRVLILQHPRESRKAMCS-VPLIPLC-----------------LREAEVVQAPMPFEAGSCFTAEGLEP---LQRSIREGY--EPLLLFPGEGAVPL-DAAAGWPQPRASS---------------KQSSATRRSRERRRKL--------LVLIDGTWSQARAMMRHSPSLA 180          
BLAST of mRNA_L-elsbetiae_contig599.14497.1 vs. uniprot
Match: A0A7S4KQU0_GUITH (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KQU0_GUITH)

HSP 1 Score: 62.8 bits (151), Expect = 2.970e-7
Identity = 27/54 (50.00%), Postives = 36/54 (66.67%), Query Frame = 0
Query:  143 LCERCRRARKMCLCSSLPPRAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLSN 196
            LC RC R  ++C+CSSLP   + +  + +ILQHP E KK+  GTVP+V  CL N
Sbjct:  106 LCHRCLRPARVCICSSLPEEPIESKLKIMILQHPKERKKKTYGTVPIVQLCLKN 159          
BLAST of mRNA_L-elsbetiae_contig599.14497.1 vs. uniprot
Match: A0A6P7V939_IXOSC (tRNA-uridine aminocarboxypropyltransferase n=3 Tax=Ixodes TaxID=6944 RepID=A0A6P7V939_IXOSC)

HSP 1 Score: 60.8 bits (146), Expect = 6.870e-7
Identity = 53/198 (26.77%), Postives = 74/198 (37.37%), Query Frame = 0
Query:  141 RDLCERCRRARKMCLCSSLPPRAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLSNCRRIVMRSDYGEDELRKVLGVDAGSADDGGQAGDARGRSPEVSSERSLEGGVTSRPLLLFPCPGAEFLEDIAAATRQHFASSTPXXXXXXXXXXXXXRPTAAPATSPSTSAPLPPSPSGPMVVLIDGTWSQAKQILSRYPFL 338
            R LC +CRR   +C CSSLP   +P S++  ILQHP E K+ +  T P++   L +   +V+R      E    L       D+G   GD                      L+L+P P AE LED+     +                                         G  +VL+DGTWSQA+ +    P L
Sbjct:   24 RALCNKCRRPPAVCWCSSLPETPVPVSSKVFILQHPGEVKRNLR-TAPMLEAALDSEHCVVLRGRRFSRERHGALNAML-DGDEGPSLGDT---------------------LVLYPGPNAEPLEDLPTVRERG---------------------------------------RGYNLVLLDGTWSQARSLFHNSPHL 159          
BLAST of mRNA_L-elsbetiae_contig599.14497.1 vs. uniprot
Match: A0A8J4F002_9CHLO (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F002_9CHLO)

HSP 1 Score: 60.8 bits (146), Expect = 1.830e-6
Identity = 30/57 (52.63%), Postives = 39/57 (68.42%), Query Frame = 0
Query:  140 GRDLCERCRRARKMCLCSSLPPRAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLSN 196
            GR  C+RC+R R++CLC+ LP R M    R +ILQHP E KKR+  TVPL+  CL +
Sbjct:   63 GRPTCDRCKRPRRVCLCTVLPVRPMRLLGRILILQHPHELKKRL-ATVPLLKCCLDD 118          
BLAST of mRNA_L-elsbetiae_contig599.14497.1 vs. uniprot
Match: A0A8J4FVT4_9CHLO (tRNA-uridine aminocarboxypropyltransferase n=3 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4FVT4_9CHLO)

HSP 1 Score: 60.8 bits (146), Expect = 1.840e-6
Identity = 30/57 (52.63%), Postives = 39/57 (68.42%), Query Frame = 0
Query:  140 GRDLCERCRRARKMCLCSSLPPRAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLSN 196
            GR  C+RC+R R++CLC+ LP R M    R +ILQHP E KKR+  TVPL+  CL +
Sbjct:   54 GRPTCDRCKRPRRVCLCTVLPVRPMRLLGRILILQHPHELKKRL-ATVPLLKCCLDD 109          
BLAST of mRNA_L-elsbetiae_contig599.14497.1 vs. uniprot
Match: A0A8J4EYZ0_9CHLO (tRNA-uridine aminocarboxypropyltransferase n=3 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4EYZ0_9CHLO)

HSP 1 Score: 60.8 bits (146), Expect = 1.990e-6
Identity = 30/57 (52.63%), Postives = 39/57 (68.42%), Query Frame = 0
Query:  140 GRDLCERCRRARKMCLCSSLPPRAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLSN 196
            GR  C+RC+R R++CLC+ LP R M    R +ILQHP E KKR+  TVPL+  CL +
Sbjct:   63 GRPTCDRCKRPRRVCLCTVLPVRPMRLLGRILILQHPHELKKRL-ATVPLLKCCLDD 118          
BLAST of mRNA_L-elsbetiae_contig599.14497.1 vs. uniprot
Match: UPI001551B50F (DTW domain-containing protein 2 isoform X4 n=1 Tax=Trachemys scripta elegans TaxID=31138 RepID=UPI001551B50F)

HSP 1 Score: 58.5 bits (140), Expect = 3.010e-6
Identity = 56/191 (29.32%), Postives = 76/191 (39.79%), Query Frame = 0
Query:  144 CERCRRARKMCLCSSLPPRAMPTSTRFVILQHPAETKKRVTGTVPLVLHCL--SNCRRIVMRSDYGEDELRKVLGVDAGSADDGGQAGDARGRSPEVSSERSLEGGVTSRPLLLFPCPGAEFLEDIAAATRQHFASSTPXXXXXXXXXXXXXRPTAAPATSPSTSAPLPPSPSGPMVVLIDGTWSQAKQIL 332
            C RC R +K+CLC   P   +  ST   I+QHPAE + RV  TVPL+  CL    C+ ++ R  +GED   K                    R PE+++         S  L+L+P   A  LE++A                                 SPST            +++IDGTWSQAK I 
Sbjct:   46 CGRCSRPQKVCLCPFFPVHPLKVSTCLYIIQHPAE-ESRVLRTVPLLAACLPGDKCKVLIGRR-FGEDRKTKSSLCSC--------------RYPELAAVCR-----NSSTLILYPGAEAANLEELALIF-----------------------------PSPST------------IIIIDGTWSQAKDIF 174          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig599.14497.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FT56_ECTSI6.160e-6453.85tRNA-uridine aminocarboxypropyltransferase n=2 Tax... [more]
UPI00140275523.450e-1032.56DTW domain-containing protein 2 n=1 Tax=Petromyzon... [more]
A0A7S3RJQ7_EMIHU1.360e-934.00tRNA-uridine aminocarboxypropyltransferase (Fragme... [more]
R1BXS1_EMIHU4.920e-934.00tRNA-uridine aminocarboxypropyltransferase n=2 Tax... [more]
A0A7S4KQU0_GUITH2.970e-750.00tRNA-uridine aminocarboxypropyltransferase n=1 Tax... [more]
A0A6P7V939_IXOSC6.870e-726.77tRNA-uridine aminocarboxypropyltransferase n=3 Tax... [more]
A0A8J4F002_9CHLO1.830e-652.63tRNA-uridine aminocarboxypropyltransferase n=1 Tax... [more]
A0A8J4FVT4_9CHLO1.840e-652.63tRNA-uridine aminocarboxypropyltransferase n=3 Tax... [more]
A0A8J4EYZ0_9CHLO1.990e-652.63tRNA-uridine aminocarboxypropyltransferase n=3 Tax... [more]
UPI001551B50F3.010e-629.32DTW domain-containing protein 2 isoform X4 n=1 Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00049WILMSTUMOURcoord: 278..292
score: 73.33
coord: 224..240
score: 31.76
NoneNo IPR availablePANTHERPTHR21392:SF0DTW DOMAIN-CONTAINING PROTEIN 2coord: 133..339
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 36..53
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 54..372
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..53
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 24..35
IPR005636DTWSMARTSM01144DTW_2acoord: 140..367
e-value: 2.2E-10
score: 50.5
IPR005636DTWPFAMPF03942DTWcoord: 141..338
e-value: 1.9E-29
score: 102.8
IPR039262DTW domain-containing protein 2PANTHERPTHR21392UNCHARACTERIZEDcoord: 133..339

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig599contigL-elsbetiae_contig599:1378..4467 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig599.14497.1mRNA_L-elsbetiae_contig599.14497.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig599 1292..4467 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig599.14497.1 ID=prot_L-elsbetiae_contig599.14497.1|Name=mRNA_L-elsbetiae_contig599.14497.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=372bp
MSPAGSMCSRRAAAADRKKTITRVVLLQSVILAGTTMTGSGSVTGSGGGS
VACKGWSAGSLSSALLLRPAHTPFLAAKRKGLVGLPLGIARQEEERTPAD
QPVAIEMVASTGRERSKAAQQAYHERKREALSAWSEERQGRDLCERCRRA
RKMCLCSSLPPRAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLSNCRRI
VMRSDYGEDELRKVLGVDAGSADDGGQAGDARGRSPEVSSERSLEGGVTS
RPLLLFPCPGAEFLEDIAAATRQHFASSTPPPPPPPPPPPPPPRPTAAPA
TSPSTSAPLPPSPSGPMVVLIDGTWSQAKQILSRYPFLSPQKPSVAGPGG
RGLKFSSLGGAPDAGAPSAFPG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005636DTW
IPR039262DTWD2