mRNA_L-elsbetiae_contig5985.14488.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5985.14488.1
Unique NamemRNA_L-elsbetiae_contig5985.14488.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5985.14488.1 vs. uniprot
Match: A0A6H5JV64_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV64_9PHAE)

HSP 1 Score: 732 bits (1889), Expect = 2.100e-260
Identity = 359/436 (82.34%), Postives = 391/436 (89.68%), Query Frame = 1
Query:   28 HGKNKLTVGQRLQIVRAVQGGQQRSKVARDFGVGKAYITKLMKPEMIASLEKSRDMELNLDAKRTPTPVHAGLEARLNQWIKIARQRFETTKLGLSGLMIQTQATKFASEMNVTNFTASNGWLHGFLGRYGFVHINLHGEAGDVDKAKAEREIAKIREQLEGFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDASICQRWFDEVFVPFVKKNTGKKVALLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKCQYKTEMVMRLAALTEDWDTARARKIRRGCRGLSDAGQATMLDVTEILSQKWESFSDQTVVRCWLKATILPREHENALKGRDTRLDREDKE-AAALDDLCDMVKKMSL 1332
            HG+NKLT GQRLQ+VR VQ G+QRSKVA  +GV  +YI+KLMKP+ +A L KSRD ELNLDA RTPTPVH  LE RL QWIK+AR RFETTK+GLSG+MIQTQATKFASEM   +FTAS GWLH FL RYGF HINLHGEAGDVDK K E +IAKIREQLEGFDVELIFNMDETGLF+RCFPRGTYVTRAE AAGVN+KTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVI TAK+PMVFRH+R+ P PYY+QQSAWLD+++CQRWFDEVFVPFVKK TGKKV LLWDNCPGHKIKNDDPQI+IIFLPPNVTSVFQPMDMG+LFALKCQYKTEMV RLA L + WD  RARKIRRGCRGL+DAGQATMLDVTEILS+KWESFS QTV+RCWLKA ILPREHENALKG+DTRLDREDKE  A +DDLC+MV KMS+
Sbjct:  165 HGQNKLTTGQRLQLVRDVQAGKQRSKVAATYGVTTSYISKLMKPDKLAELHKSRDSELNLDALRTPTPVHDDLEKRLLQWIKVARARFETTKIGLSGIMIQTQATKFASEMGKKDFTASKGWLHRFLKRYGFKHINLHGEAGDVDKTKYEEQIAKIREQLEGFDVELIFNMDETGLFFRCFPRGTYVTRAEDAAGVNRKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVISTAKNPMVFRHIRRSPIPYYSQQSAWLDSTLCQRWFDEVFVPFVKKTTGKKVVLLWDNCPGHKIKNDDPQIIIIFLPPNVTSVFQPMDMGILFALKCQYKTEMVARLADLIDVWDAVRARKIRRGCRGLNDAGQATMLDVTEILSEKWESFSSQTVIRCWLKANILPREHENALKGKDTRLDREDKEDTAIIDDLCEMVSKMSM 600          
BLAST of mRNA_L-elsbetiae_contig5985.14488.1 vs. uniprot
Match: A0A6H5JEY2_9PHAE (HTH CENPB-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY2_9PHAE)

HSP 1 Score: 678 bits (1750), Expect = 2.690e-241
Identity = 331/395 (83.80%), Postives = 357/395 (90.38%), Query Frame = 1
Query:  151 MKPEMIASLEKSRDMELNLDAKRTPTPVHAGLEARLNQWIKIARQRFETTKLGLSGLMIQTQATKFASEMNVTNFTASNGWLHGFLGRYGFVHINLHGEAGDVDKAKAEREIAKIREQLEGFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDASICQRWFDEVFVPFVKKNTGKKVALLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKCQYKTEMVMRLAALTEDWDTARARKIRRGCRGLSDAGQATMLDVTEILSQKWESFSDQTVVRCWLKATILPREHENALKGRDTRLDREDKE-AAALDDLCDMVKKMSL 1332
            MKP+ +A L KSRD ELNLDA RTPTPVH  LE RL QWIK+AR RFETTK+GLSG+MIQTQATKFASEM   +FTAS GWLH FL RYGF HINLHGEAGDVDK K E +IAKIREQLEGFDVELIFNMDETGLF+RCFPRGTYVTRAE AAGVN+KTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVI TAK+PMVFRH+R+ P PYY+QQSAWLD+++CQRWFDEVFVPFVKK TGKKV LLWDNCPGHKIKNDDPQI+IIFLPPNVTSVFQPMDMG+LFALKCQYKTEMV RLA L + WD  RARKIRRGCRGL+DAGQATMLDVTEILS+KWESFS QTV+RCWLKA ILPREHENALKG+DTRLDREDKE  A +DDLC+MV KMS+
Sbjct:    1 MKPDKLAELHKSRDSELNLDALRTPTPVHDDLEKRLLQWIKVARARFETTKIGLSGIMIQTQATKFASEMGKKDFTASKGWLHRFLKRYGFKHINLHGEAGDVDKTKYEEQIAKIREQLEGFDVELIFNMDETGLFFRCFPRGTYVTRAEDAAGVNRKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVISTAKNPMVFRHIRRSPIPYYSQQSAWLDSTLCQRWFDEVFVPFVKKTTGKKVVLLWDNCPGHKIKNDDPQIIIIFLPPNVTSVFQPMDMGILFALKCQYKTEMVARLADLIDVWDAVRARKIRRGCRGLNDAGQATMLDVTEILSEKWESFSSQTVIRCWLKANILPREHENALKGKDTRLDREDKEDTAIIDDLCEMVSKMSM 395          
BLAST of mRNA_L-elsbetiae_contig5985.14488.1 vs. uniprot
Match: A0A6H5JNS8_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS8_9PHAE)

HSP 1 Score: 646 bits (1666), Expect = 6.690e-228
Identity = 322/430 (74.88%), Postives = 355/430 (82.56%), Query Frame = 1
Query:   55 QRLQIVRAVQGGQQRSKVARDFGVGKAYITKLMKPEMIASLEKSRDMELNLDAKRTPTPVHAGLEARLNQWIKIARQRFETTKLGLSGLMIQTQATKFASEMNVTNFTASNGWLHGFLGRYGFVHINLHGEAGDVDKAKAEREIAKIREQLEGFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVP---LAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDASICQRWFDEVFVPFVKKNTGKKVALLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKCQYKTEMVMRLAALTEDWDTARARKIRRGCRGLSDAGQATMLDVTEILSQKWESFSDQTVVRCWLKATILPREHENALKGRDTRLDREDKE-AAALDDLCDMVKKMSL 1332
            QRL IV+ VQGG +RS VA  + VG +YI+KLM PE IA LEK RDMELN DA R P PVH  +E +L +WIKIAR RF+ TK+G+SG MIQ QA K A++M  TNF A+NGWL+ FL RY F H+ LHGEAGDVDK K   EI +IREQL+ FDV+ IFNMDE GLF+RCFPRGTYVTR E AAGVN KTARGSKAMKAKDRCTVVACCNTTGSL VP   LAVI T+K PMVFRHVRKPPCPY+AQ SAWLDA+ICQRWFDEVFVPFVK  T KKVALLWDNCPGHKIK++DPQIVIIFLPPNV SV+QPM+MG+LF LKCQYKTEMV RLA L EDWDT RARKI+RGCRGLSDAGQATMLDVTEI SQKW SF  QTV+RCWLKA ILPREH   LKG DTRLDREDK+ AA +D LCDM  KMS+
Sbjct:    3 QRLHIVKEVQGGAKRSMVAAKWNVGTSYISKLMNPEKIAELEKVRDMELNQDALRAPKPVHDEVEEKLRKWIKIARARFDATKMGVSGSMIQAQALKIAAQMGKTNFKATNGWLYRFLKRYSFTHVQLHGEAGDVDKQKVAEEIERIREQLQEFDVDFIFNMDEMGLFFRCFPRGTYVTRGEAAAGVNSKTARGSKAMKAKDRCTVVACCNTTGSLMVPFXPLAVISTSKKPMVFRHVRKPPCPYFAQSSAWLDAAICQRWFDEVFVPFVKGKTSKKVALLWDNCPGHKIKSNDPQIVIIFLPPNVNSVYQPMNMGILFVLKCQYKTEMVARLADLIEDWDTVRARKIQRGCRGLSDAGQATMLDVTEICSQKWRSFDVQTVIRCWLKAGILPREHCKVLKGMDTRLDREDKDDAAIIDGLCDMATKMSM 432          
BLAST of mRNA_L-elsbetiae_contig5985.14488.1 vs. uniprot
Match: A0A6H5KA74_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA74_9PHAE)

HSP 1 Score: 632 bits (1630), Expect = 2.220e-220
Identity = 345/569 (60.63%), Postives = 382/569 (67.14%), Query Frame = 1
Query:    7 KAKPGSDHGKNKLTVGQRLQIVRAVQGGQQRSKVARDFGVGKAYITKLMKPEMIASLEKSRDMELNLDAKRTPTPVHAGLEARLNQWIKIARQRFE---------------------------------TTKLGLSGLMIQTQATKFASEMNVTNFTASNGWLHGFLGRYGFVHINLHGEAGDVDKAKAEREIAKIREQLEGFDVELIFNMDETGLFYRCFPRG--------------------------------------------------------------------------------------------TYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPY--YAQQSAWLDASICQRWFDEVFVPFVKKNTGKKVALLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKCQYKTEMVMRLAALTEDWDTARARKIRRGCRGLSDAGQATMLDVTEILSQKWESFSDQTVVRCWLKATILPREHENALKGRDTRLDREDKEAAALDDLCDMVKKMSL 1332
            KAK GSDHG+NKLT+ QR +IV AV+GG+QRSKVA D+ VGKAY++KLMKP MIA+LEK+RD+ELN+ AKRTPTP+HA LE                                                TTKLGLSG+MIQTQATKFA+EMNVTNFTASNGWLH F  RYG VHINLHGEAGDV+KA AE+EIA+IREQLEGFDVELIFNMDETGLF+RCFPRG                                                                                            TYVTR+EGAAG+N+KTARGSKAMKAKDRCTVVACCNTTGSLKVPLA+IHTAKDPMVFR VRKP CPY  YAQ+SAWLD+++CQRWFDEVFVPFVKK TGKK+ALLWDNCPGH+IKNDDPQIVIIFLPPNVTSVFQPMDMG+LFALKCQYKT+M+MR                     GL+DAGQ TMLDVTEILSQKWESFSDQTV+RCWLKATILP EHE+ALK  DTRLDRED  AAALDDL DMV+KMS+
Sbjct:  112 KAKSGSDHGENKLTIAQRWKIVEAVRGGRQRSKVAADYNVGKAYVSKLMKPPMIAALEKARDIELNMGAKRTPTPIHAELEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTKLGLSGIMIQTQATKFAAEMNVTNFTASNGWLHRFFSRYGLVHINLHGEAGDVNKAAAEKEIAQIREQLEGFDVELIFNMDETGLFHRCFPRGMYVTRSEGAAGLNQKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAIIHXEGFDVELIFNMDETGLFYRCFXXXXXXXXXXXXXXXXXXPRGTYVTRSEGAAGLNQKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAIIHTAKDPMVFRQVRKPACPYLYYAQKSAWLDSALCQRWFDEVFVPFVKKTTGKKMALLWDNCPGHRIKNDDPQIVIIFLPPNVTSVFQPMDMGILFALKCQYKTKMLMR---------------------GLNDAGQPTMLDVTEILSQKWESFSDQTVIRCWLKATILPGEHESALKDNDTRLDREDPGAAALDDLYDMVEKMSM 659          
BLAST of mRNA_L-elsbetiae_contig5985.14488.1 vs. uniprot
Match: A0A6H5JLK3_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLK3_9PHAE)

HSP 1 Score: 539 bits (1389), Expect = 6.090e-188
Identity = 273/346 (78.90%), Postives = 294/346 (84.97%), Query Frame = 1
Query:  295 TTKLGLSGLMIQTQATKFASEMNVTNFTASNGWLHGFLGRYGFVHINLHGEAGDVDKAKAEREIAKIREQLEGFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDASICQRWFDEVFVPFVKKNTGKKVALLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKCQYKTEMVMRLAALTEDWDTARARKIRRGCRGLSDAGQATMLDVTEILSQKWESFSDQTVVRCWLKATILPREHENALKGRDTRLDREDKEAAALDDLCDMVKKMSL 1332
            TTKLGLSG+MIQTQA K A+EMNVT+FTASNGWLH FL RYG VHINLHGEAGDV+KA AE++IA+IREQLEGFDVELIFNMDETGLF+RC         + GA G+N+K ARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRH                      RWFD+VFVPFVKK TGKKVALLWDNCPGH+IKNDDPQIVIIFLPPNV SVFQPMDMG+LFALKCQYKTEMVMRLAAL EDWDTARAR+IR GCRGL+DAGQ TMLDVTE+LSQKWESFSDQTV+RCWLKATI P EHE+ALK  DTRLDRED  A ALDDLCDMV+KMS+
Sbjct:    3 TTKLGLSGIMIQTQAPKLAAEMNVTHFTASNGWLHRFLSRYGLVHINLHGEAGDVNKAAAEKKIAQIREQLEGFDVELIFNMDETGLFHRC---------SRGAPGLNQKNARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRH----------------------RWFDKVFVPFVKKTTGKKVALLWDNCPGHRIKNDDPQIVIIFLPPNVMSVFQPMDMGILFALKCQYKTEMVMRLAALIEDWDTARARQIRTGCRGLNDAGQPTMLDVTEVLSQKWESFSDQTVIRCWLKATIRPGEHESALKDNDTRLDREDPGATALDDLCDMVEKMSM 317          
BLAST of mRNA_L-elsbetiae_contig5985.14488.1 vs. uniprot
Match: A0A6H5JV34_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV34_9PHAE)

HSP 1 Score: 527 bits (1358), Expect = 1.440e-182
Identity = 269/380 (70.79%), Postives = 296/380 (77.89%), Query Frame = 1
Query:  292 ETTKLGLSGLMIQTQATKFASEMNVTNFTASNGWLHGFLGRYGFVHINLHGEAGDV---------------------------------DKAKAEREIAKIREQLEGFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDASICQRWFDEVFVPFVKKNTGKKVALLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKCQYKTEMVMRLAALTEDWDTARARKIRRGCRGLSDAGQATMLDVTEILSQKWESFSDQTVVRCWLKATILPREHENALKGRDTRLDREDKEAAALDDLCDMVKKMSL 1332
            +TTKLGLSG+MI+TQATKFA+E+NVTNFTAS+GWLH FL RYG VHINLHGEAGD                                  +KA AE+EIA+I EQL+GFDVELIFNM+ETGLF+RCFPRGTYVTR+E AAG+N+KTARGSKAMKAKDRCTVV+CCNTTGSLKVPLAVIHTAKDPMVFRHVRKP CPYYAQ+S WLD+S+CQRWFDEVFVPFVKK TGKKVALLWDNCPGH+IKNDDPQIVIIFLPPNVTSVFQPMDMG                                   CRGL++AGQ TMLDVTEILSQKWESF DQTV+RCWLKATILP EHE+ALK +DTRLDRED  AAALDDLCDMV+KMS+
Sbjct:    2 QTTKLGLSGIMIRTQATKFAAEINVTNFTASDGWLHRFLSRYGLVHINLHGEAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKAAAEKEIAQIWEQLQGFDVELIFNMEETGLFHRCFPRGTYVTRSESAAGLNQKTARGSKAMKAKDRCTVVSCCNTTGSLKVPLAVIHTAKDPMVFRHVRKPACPYYAQKSGWLDSSLCQRWFDEVFVPFVKKTTGKKVALLWDNCPGHRIKNDDPQIVIIFLPPNVTSVFQPMDMG-----------------------------------CRGLNEAGQPTMLDVTEILSQKWESFLDQTVIRCWLKATILPGEHESALKDKDTRLDREDPWAAALDDLCDMVEKMSM 346          
BLAST of mRNA_L-elsbetiae_contig5985.14488.1 vs. uniprot
Match: A0A6H5JYC6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYC6_9PHAE)

HSP 1 Score: 510 bits (1313), Expect = 3.650e-176
Identity = 265/342 (77.49%), Postives = 270/342 (78.95%), Query Frame = 1
Query:    1 GRKAKPGSDHGKNKLTVGQRLQIVRAVQGGQQRSKVARDFGVGKAYITKLMKPEMIASLEKSRDMELNLDAKRTPTPVHAGLEARLNQWIKIARQRFETTKLGLSGLMIQTQATKFASEMNVTNFTASNGWLHGFLGRYGFVHINLHGEAGDVDKAKAEREIAKIREQLEGFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDASICQRWFDEVFVPFVKKNTGKKVALLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKCQYKT 1026
            GRKAKPGSDHGKNKLTVGQRLQIVRAVQGGQQRSKVA DFGVGKAYITKLMKPEMIASLEKSRDMELNLDAKRTPTPVHAGLEARLNQWIKIARQRFE                                                                      LEGFDVELIFNMD+TGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKD+CTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDASICQRWFDEVFVPFVK+NTGKKVALLW+NCPGH+IKNDDPQIVIIFLPP VTSVFQPMDMGVLFALKCQYKT
Sbjct:  188 GRKAKPGSDHGKNKLTVGQRLQIVRAVQGGQQRSKVAGDFGVGKAYITKLMKPEMIASLEKSRDMELNLDAKRTPTPVHAGLEARLNQWIKIARQRFE----------------------------------------------------------------------LEGFDVELIFNMDQTGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDQCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDASICQRWFDEVFVPFVKENTGKKVALLWNNCPGHEIKNDDPQIVIIFLPPKVTSVFQPMDMGVLFALKCQYKT 459          
BLAST of mRNA_L-elsbetiae_contig5985.14488.1 vs. uniprot
Match: A0A6H5KFG9_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFG9_9PHAE)

HSP 1 Score: 501 bits (1289), Expect = 3.450e-173
Identity = 256/364 (70.33%), Postives = 281/364 (77.20%), Query Frame = 1
Query:  175 LEKSRDMELNLDAKRTPTPVHAGLEARLNQWIKIARQRFETTKLGLSGLMIQTQATKFASEMNVTNFTASNGWLHGFLGRYGFVHINLHGEAGDVDKAKAEREIAKIREQLEGFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDASICQRWFDEVFVPFVKKNTGKKVALLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKCQYKTEMVMRLAALTEDWDTARARKIRRGCRGLSDAGQATMLDVTEILSQKWESFSDQTVVRCWLKATILPREHENALKGRDTRL 1266
            L K+  MELN +A+R P PV A LE R+ +WIKIA++RF TTK+GLSG MIQ +A KFASEM +    ASNGWLH  L R    HINLHGEAGDVD+ K + +IA+  EQL  FDVE IFNMDET LFYRCFPRGTYVTR E AAGVNK TARGSKAMKA                 VPLAVI TA +PMVFR VR+ PCPYYAQ SAWLDAS+CQRWFDEVFVPFVK  T +KV L WDNCPGHKI N+DPQIVIIFLPP VTSVFQPMDMG LF LKCQ K EMV+RL+ + EDWDT RAR I RGC+GLSDAGQAT LDV EIL+QKWESFSDQTVVRCW KATILP EHEN  K +DTRL
Sbjct:   16 LNKAVQMELNPEARRVPEPVEAELEQRVLKWIKIAQERFMTTKIGLSGTMIQHRAVKFASEMGI-KLAASNGWLHRSLKRCQLKHINLHGEAGDVDQEKVQEKIAQTEEQLNEFDVEFIFNMDETALFYRCFPRGTYVTRQEDAAGVNKNTARGSKAMKAX----------------VPLAVIGTAANPMVFRKVRELPCPYYAQASAWLDASLCQRWFDEVFVPFVKSKTARKVTLTWDNCPGHKIINNDPQIVIIFLPPLVTSVFQPMDMGALFTLKCQNKPEMVVRLSDVIEDWDTVRARNIPRGCQGLSDAGQATTLDVAEILTQKWESFSDQTVVRCWPKATILPEEHENVFKRKDTRL 362          
BLAST of mRNA_L-elsbetiae_contig5985.14488.1 vs. uniprot
Match: A0A6H5K051_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K051_9PHAE)

HSP 1 Score: 486 bits (1250), Expect = 2.010e-168
Identity = 248/370 (67.03%), Postives = 279/370 (75.41%), Query Frame = 1
Query:   55 QRLQIVRAVQGGQQRSKVARDFGVGKAYITKLMKPEMIASLEKSRDMELNLDAKRTPTPVHAGLEARLNQWIKIARQRFETTKLGLSGLMIQTQATKFASEMNVTNFTASNGWLHGFLGRYGFVHINLHGEAGDVDKAKAEREIAKIREQLEGFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKPPCPYYAQQSAWLDASICQRWFDEVFVPFVKKNTGKKVALLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKCQYKTEMVMRLAALTEDWDTARARKIRRGCRGLSDAGQATMLDVTEILSQK 1164
            QRL+IV+ VQ G +RS VA  + VG +YI+KLM PE IA LEK R MELN DA R P                        TK+G+SG MIQ QA K  ++M   NF A+NGWLH FL RY F H+ LHGEAGDVDK K   EI +IR+ L+ FDVE IF+MDETGLF+RCFPRGTYVT+ E AAGVN +T RGSKAMKAKDRCTVVACCNT GSL VPLAVI T+K  +VFR VRKPPCPY+AQ SAWLDA+I QRWFDEVFVPFVK  T  KVALLWD  PGHKIK++DPQIV+IFLPPNV SV+QPM MG+L  LK QYKTEMV RLA L EDWDT RAR+++RGCRGLSDAGQ TMLDVTEI SQK
Sbjct:    3 QRLKIVKEVQWGAKRSMVAAKWNVGASYISKLMNPEKIAELEKIRHMELNQDALRAPKTA---------------------TKIGVSGSMIQAQALKIVAQMGKNNFKATNGWLHRFLKRYSFTHVQLHGEAGDVDKQKVAEEIERIRKHLQEFDVEFIFDMDETGLFFRCFPRGTYVTKGEAAAGVNSETVRGSKAMKAKDRCTVVACCNTAGSLMVPLAVISTSKKRVVFRLVRKPPCPYFAQDSAWLDAAIYQRWFDEVFVPFVKGKTSTKVALLWDKGPGHKIKSNDPQIVVIFLPPNVPSVYQPMGMGILLVLKRQYKTEMVARLADLIEDWDTVRARQLQRGCRGLSDAGQVTMLDVTEICSQK 351          
BLAST of mRNA_L-elsbetiae_contig5985.14488.1 vs. uniprot
Match: A0A6H5K549_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K549_9PHAE)

HSP 1 Score: 472 bits (1215), Expect = 2.220e-161
Identity = 264/454 (58.15%), Postives = 303/454 (66.74%), Query Frame = 1
Query:  106 VARDFGVGKAYI-TKLMKPEMIASLEKSRDMELNLDAKRTPTPVHAGLEARLNQWIKIARQRFET-------------------------------------TKLGLSGLMIQTQATKFASEMNVTNFTASNGWLHGFLGRYGFVHINLHGEAGDVDKAKAEREIAKIREQLEGFDVELIFNMDETGLFYRCFPRGTYVTRAEGAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVFRHVRKP------PCPYYAQQSAWLDASICQRWFDEVFVPFVKKNTGKKVALLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKCQYKTEMVMRLAALTEDWDTARARKIRRGCRGLSDAGQATMLDVTEILSQKWESFSDQTVVRCWLKATILPREHENALKGRDTRLDREDKE-AAALDDLCDMVKKMSL 1332
            V   + VG +YI +KL+ PE IA LEK RDMELN DA R P PVH  +E +L +WIKIAR+R                                        TK+G+SG MIQ QA K A++M   NF A+NGWLH FL RY F ++ L G+AGDVDK K   EI +IREQL+ FDVE IFNMDE GLF+RCFPRGT+VTR + AAGVN KTARGSKAMKAKDRCTVVACCNT GSL VPLAVI T++  M+FRHVRK       P    A++S  L A    R      +PFVK  T KK ALLWDNCPGHKI+++D Q+VII LPPNVTS++QP DMG+LF LKCQYK E+V RLA L EDWDT RARK +RGCRGLSDAGQATMLDVTEI SQKW                ILPREH N LKG DTRLDRE K+ AA +D LCDMV KMS+
Sbjct:    2 VGAKWNVGTSYIISKLVDPEKIAELEKVRDMELNQDALRAPKPVHDEVEEKLRKWIKIARERSNVSTYLALVMCWSGYNLVVYTPTPFRPYTSSHSRPSCWATKIGVSGSMIQAQALKIAAQMGKANFKATNGWLHRFLKRYSFTYVQLRGKAGDVDKQKVAEEIERIREQLQEFDVEFIFNMDEMGLFFRCFPRGTHVTRGQAAAGVNSKTARGSKAMKAKDRCTVVACCNTIGSLMVPLAVISTSRKSMIFRHVRKTAMSLLRPGECLARRSH-LPAVTSSRT-GTPSIPFVKGKTSKKEALLWDNCPGHKIESNDSQVVIILLPPNVTSIYQPTDMGILFVLKCQYKAEVVARLADLIEDWDTVRARKTQRGCRGLSDAGQATMLDVTEICSQKWH---------------ILPREHCNVLKGMDTRLDREAKDDAAIMDGLCDMVSKMSM 438          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5985.14488.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JV64_9PHAE2.100e-26082.34HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5JEY2_9PHAE2.690e-24183.80HTH CENPB-type domain-containing protein n=2 Tax=E... [more]
A0A6H5JNS8_9PHAE6.690e-22874.88HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5KA74_9PHAE2.220e-22060.63HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5JLK3_9PHAE6.090e-18878.90HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5JV34_9PHAE1.440e-18270.79HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5JYC6_9PHAE3.650e-17677.49DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KFG9_9PHAE3.450e-17370.33HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5K051_9PHAE2.010e-16867.03HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5K549_9PHAE2.220e-16158.15HTH CENPB-type domain-containing protein n=1 Tax=E... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5985contigL-elsbetiae_contig5985:1358..3201 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score246.1
Seed ortholog evalue3e-62
Seed eggNOG ortholog6669.EFX68856
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Jerky protein homolog-like
EggNOG OGs38HJW@33154,3BCG5@33208,3CXR0@33213,420II@6656,KOG3105@1,KOG3105@2759
COG Functional cat.BD
Best tax levelArthropoda
Best eggNOG OGNA|NA|NA
Exons3
Model size1332
Cds size1332
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5985.14488.1prot_L-elsbetiae_contig5985.14488.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5985 1358..3201 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816649.1791413-CDS-L-elsbetiae_contig5985:1357..15951622816649.1791413-CDS-L-elsbetiae_contig5985:1357..1595Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5985 1358..1595 -
1691683711.532736-CDS-L-elsbetiae_contig5985:1357..15951691683711.532736-CDS-L-elsbetiae_contig5985:1357..1595Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5985 1358..1595 -
1622816649.1890385-CDS-L-elsbetiae_contig5985:1883..26831622816649.1890385-CDS-L-elsbetiae_contig5985:1883..2683Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5985 1884..2683 -
1691683711.548707-CDS-L-elsbetiae_contig5985:1883..26831691683711.548707-CDS-L-elsbetiae_contig5985:1883..2683Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5985 1884..2683 -
1622816649.2008708-CDS-L-elsbetiae_contig5985:2907..32011622816649.2008708-CDS-L-elsbetiae_contig5985:2907..3201Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5985 2908..3201 -
1691683711.5637386-CDS-L-elsbetiae_contig5985:2907..32011691683711.5637386-CDS-L-elsbetiae_contig5985:2907..3201Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5985 2908..3201 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5985.14488.1

>prot_L-elsbetiae_contig5985.14488.1 ID=prot_L-elsbetiae_contig5985.14488.1|Name=mRNA_L-elsbetiae_contig5985.14488.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=444bp
GRKAKPGSDHGKNKLTVGQRLQIVRAVQGGQQRSKVARDFGVGKAYITKL
MKPEMIASLEKSRDMELNLDAKRTPTPVHAGLEARLNQWIKIARQRFETT
KLGLSGLMIQTQATKFASEMNVTNFTASNGWLHGFLGRYGFVHINLHGEA
GDVDKAKAEREIAKIREQLEGFDVELIFNMDETGLFYRCFPRGTYVTRAE
GAAGVNKKTARGSKAMKAKDRCTVVACCNTTGSLKVPLAVIHTAKDPMVF
RHVRKPPCPYYAQQSAWLDASICQRWFDEVFVPFVKKNTGKKVALLWDNC
PGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKCQYKTEMVMRLAA
LTEDWDTARARKIRRGCRGLSDAGQATMLDVTEILSQKWESFSDQTVVRC
WLKATILPREHENALKGRDTRLDREDKEAAALDDLCDMVKKMSL
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mRNA from alignment at L-elsbetiae_contig5985:1358..3201-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5985.14488.1 ID=mRNA_L-elsbetiae_contig5985.14488.1|Name=mRNA_L-elsbetiae_contig5985.14488.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1844bp|location=Sequence derived from alignment at L-elsbetiae_contig5985:1358..3201- (Laminarionema elsbetiae ELsaHSoW15)
GGTCGCAAAGCGAAGCCCGGATCAGACCACGGCAAGAACAAGCTCACAGT AGGGCAGCGATTGCAAATCGTCAGGGCCGTACAAGGCGGCCAGCAAAGGA GCAAAGTTGCCCGAGACTTCGGCGTGGGCAAGGCGTACATCACCAAGCTG ATGAAGCCCGAGATGATCGCCTCGCTCGAGAAGTCCCGTGACATGGAGCT CAACTTGGACGCCAAGCGCACGCCAACGCCGGTACACGCGGGCCTGGAAG CTCGTCTGAACCAGTGGATCAAGATTGCACGACAGCGATTTGAGGTAAGG ACCACACGTCGTCCATATCAGTCACGATTGATTTTTTACATCCCTCGCCG CCTTCCTGTCTGTCAAACGGTAGTCTACGTTGTTTGTGTGATGACCTGTT GCAGCAGGTAGATAGGTTGAGAGCCGCCTGACCGCTTGCATGGATTCCAA CCGAAGGCCCACATCGCGCGAACGTCCACTGCTGCTGCTGCTGCTGCTGC TGCTTCACGACCATGCAGACAACCAAGCTCGGGTTGAGCGGTCTCATGAT ACAGACCCAGGCCACGAAGTTCGCGTCCGAGATGAACGTGACCAACTTCA CGGCGAGCAACGGCTGGCTACATGGCTTCCTTGGTCGCTACGGCTTCGTG CACATCAACCTGCACGGGGAAGCTGGCGACGTGGACAAGGCGAAGGCCGA GAGGGAAATCGCGAAGATTCGGGAGCAGCTGGAGGGGTTTGACGTCGAGT TGATCTTCAACATGGACGAGACGGGGCTTTTCTACCGCTGCTTCCCGAGG GGCACGTACGTCACGAGGGCGGAGGGCGCGGCAGGAGTCAACAAGAAGAC CGCGCGGGGATCGAAGGCCATGAAGGCCAAGGACAGATGCACTGTTGTCG CCTGCTGCAACACCACCGGGTCGCTGAAGGTACCGCTGGCCGTCATCCAC ACGGCGAAAGACCCCATGGTTTTCCGCCACGTTCGCAAGCCACCTTGCCC CTACTACGCCCAGCAGAGTGCCTGGCTCGACGCTTCAATCTGCCAGCGGT GGTTTGACGAGGTCTTCGTGCCCTTCGTCAAGAAGAACACTGGGAAAAAG GTGGCTCTCTTGTGGGACAACTGCCCAGGCCACAAGATCAAGAACGACGA CCCGCAAATCGTCATCATCTTCCTGCCCCCCAACGTCACGTCCGTCTTTC AGCCTATGGACATGGGGGTCCTGTTTGCCCTCAAGTGCCAGTACAAGACG GAGATGGTGATGAGGCTGGCGGCCCTCACCGAGGACTGGGACACAGCGCG TGCGCGCAAAATCCGAAGGTGAAGACTGCTGTGTTTTTTGGCGGCGGCCA AGTTAGTGATTGGTTCTTGTGACTGCAGGTTCCGTTTTTTTTTCCTTGTT AGGCGAGTGACAAGCTGTTGCAGGTACTTTACCGTTTTGCAGCTGTAGAC GAGTGCCATGCGACAGTAGTGCTGCAAAAGGGTCTCCGACAAAAACATGC CTGCCGTACACCACATCCAGCGAAATCCACCCTCTCTCCTGGTGATTAAA AACTGTTGATCATTTTGTCTTTTTTTTACTGTGTTCCTTGCATCTTTGTT TTGCAGGGGCTGCCGGGGTCTGAGCGACGCAGGCCAGGCAACAATGCTGG ATGTGACGGAGATCCTTTCGCAGAAGTGGGAGAGCTTCTCGGACCAGACT GTTGTCAGGTGCTGGCTCAAGGCCACCATTCTTCCTAGGGAGCACGAGAA CGCGCTCAAGGGCAGAGACACGCGGCTGGACCGAGAAGACAAGGAAGCGG CCGCCTTGGACGACCTTTGCGATATGGTCAAGAAGATGTCCTTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5985:1358..3201-

>mRNA_L-elsbetiae_contig5985.14488.1 ID=mRNA_L-elsbetiae_contig5985.14488.1|Name=mRNA_L-elsbetiae_contig5985.14488.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2664bp|location=Sequence derived from alignment at L-elsbetiae_contig5985:1358..3201- (Laminarionema elsbetiae ELsaHSoW15)
GGTCGCAAAGCGAAGCCCGGATCAGACCACGGCAAGAACAAGCTCACAGT
AGGGCAGCGATTGCAAATCGTCAGGGCCGTACAAGGCGGCCAGCAAAGGA
GCAAAGTTGCCCGAGACTTCGGCGTGGGCAAGGCGTACATCACCAAGCTG
ATGAAGCCCGAGATGATCGCCTCGCTCGAGAAGTCCCGTGACATGGAGCT
CAACTTGGACGCCAAGCGCACGCCAACGCCGGTACACGCGGGCCTGGAAG
CTCGTCTGAACCAGTGGATCAAGATTGCACGACAGCGATTTGAGGGTCGC
AAAGCGAAGCCCGGATCAGACCACGGCAAGAACAAGCTCACAGTAGGGCA
GCGATTGCAAATCGTCAGGGCCGTACAAGGCGGCCAGCAAAGGAGCAAAG
TTGCCCGAGACTTCGGCGTGGGCAAGGCGTACATCACCAAGCTGATGAAG
CCCGAGATGATCGCCTCGCTCGAGAAGTCCCGTGACATGGAGCTCAACTT
GGACGCCAAGCGCACGCCAACGCCGGTACACGCGGGCCTGGAAGCTCGTC
TGAACCAGTGGATCAAGATTGCACGACAGCGATTTGAGACAACCAAGCTC
GGGTTGAGCGGTCTCATGATACAGACCCAGGCCACGAAGTTCGCGTCCGA
GATGAACGTGACCAACTTCACGGCGAGCAACGGCTGGCTACATGGCTTCC
TTGGTCGCTACGGCTTCGTGCACATCAACCTGCACGGGGAAGCTGGCGAC
GTGGACAAGGCGAAGGCCGAGAGGGAAATCGCGAAGATTCGGGAGCAGCT
GGAGGGGTTTGACGTCGAGTTGATCTTCAACATGGACGAGACGGGGCTTT
TCTACCGCTGCTTCCCGAGGGGCACGTACGTCACGAGGGCGGAGGGCGCG
GCAGGAGTCAACAAGAAGACCGCGCGGGGATCGAAGGCCATGAAGGCCAA
GGACAGATGCACTGTTGTCGCCTGCTGCAACACCACCGGGTCGCTGAAGG
TACCGCTGGCCGTCATCCACACGGCGAAAGACCCCATGGTTTTCCGCCAC
GTTCGCAAGCCACCTTGCCCCTACTACGCCCAGCAGAGTGCCTGGCTCGA
CGCTTCAATCTGCCAGCGGTGGTTTGACGAGGTCTTCGTGCCCTTCGTCA
AGAAGAACACTGGGAAAAAGGTGGCTCTCTTGTGGGACAACTGCCCAGGC
CACAAGATCAAGAACGACGACCCGCAAATCGTCATCATCTTCCTGCCCCC
CAACGTCACGTCCGTCTTTCAGCCTATGGACATGGGGGTCCTGTTTGCCC
TCAAGTGCCAGTACAAGACGGAGATGGTGATGAGGCTGGCGGCCCTCACC
GAGGACTGGGACACAGCGCGTGCGCGCAAAATCCGAAGACAACCAAGCTC
GGGTTGAGCGGTCTCATGATACAGACCCAGGCCACGAAGTTCGCGTCCGA
GATGAACGTGACCAACTTCACGGCGAGCAACGGCTGGCTACATGGCTTCC
TTGGTCGCTACGGCTTCGTGCACATCAACCTGCACGGGGAAGCTGGCGAC
GTGGACAAGGCGAAGGCCGAGAGGGAAATCGCGAAGATTCGGGAGCAGCT
GGAGGGGTTTGACGTCGAGTTGATCTTCAACATGGACGAGACGGGGCTTT
TCTACCGCTGCTTCCCGAGGGGCACGTACGTCACGAGGGCGGAGGGCGCG
GCAGGAGTCAACAAGAAGACCGCGCGGGGATCGAAGGCCATGAAGGCCAA
GGACAGATGCACTGTTGTCGCCTGCTGCAACACCACCGGGTCGCTGAAGG
TACCGCTGGCCGTCATCCACACGGCGAAAGACCCCATGGTTTTCCGCCAC
GTTCGCAAGCCACCTTGCCCCTACTACGCCCAGCAGAGTGCCTGGCTCGA
CGCTTCAATCTGCCAGCGGTGGTTTGACGAGGTCTTCGTGCCCTTCGTCA
AGAAGAACACTGGGAAAAAGGTGGCTCTCTTGTGGGACAACTGCCCAGGC
CACAAGATCAAGAACGACGACCCGCAAATCGTCATCATCTTCCTGCCCCC
CAACGTCACGTCCGTCTTTCAGCCTATGGACATGGGGGTCCTGTTTGCCC
TCAAGTGCCAGTACAAGACGGAGATGGTGATGAGGCTGGCGGCCCTCACC
GAGGACTGGGACACAGCGCGTGCGCGCAAAATCCGAAGGGGCTGCCGGGG
TCTGAGCGACGCAGGCCAGGCAACAATGCTGGATGTGACGGAGATCCTTT
CGCAGAAGTGGGAGAGCTTCTCGGACCAGACTGTTGTCAGGTGCTGGCTC
AAGGCCACCATTCTTCCTAGGGAGCACGAGAACGCGCTCAAGGGCAGAGA
CACGCGGCTGGACCGAGAAGACAAGGAAGCGGCCGCCTTGGACGACCTTT
GCGATATGGTCAAGAAGATGTCCTTGGGGCTGCCGGGGTCTGAGCGACGC
AGGCCAGGCAACAATGCTGGATGTGACGGAGATCCTTTCGCAGAAGTGGG
AGAGCTTCTCGGACCAGACTGTTGTCAGGTGCTGGCTCAAGGCCACCATT
CTTCCTAGGGAGCACGAGAACGCGCTCAAGGGCAGAGACACGCGGCTGGA
CCGAGAAGACAAGGAAGCGGCCGCCTTGGACGACCTTTGCGATATGGTCA
AGAAGATGTCCTTG
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