mRNA_L-elsbetiae_contig5921.14396.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5921.14396.1
Unique NamemRNA_L-elsbetiae_contig5921.14396.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig5921.14396.1 vs. uniprot
Match: D8LMN3_ECTSI (CNOT1_TTP_bind domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN3_ECTSI)

HSP 1 Score: 268 bits (685), Expect = 2.550e-79
Identity = 131/136 (96.32%), Postives = 132/136 (97.06%), Query Frame = 1 
Query:    1 IAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHNYPDKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRAPGPDSAGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVANHPALVEEIERSMQRQQG 408
            IAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHNYP+KELRITGIL GSLIQHQLVSSITLGIALRYVLEALRRAPGPD AGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLV NHPALVEEIERSMQRQ G
Sbjct:  846 IAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHNYPEKELRITGILLGSLIQHQLVSSITLGIALRYVLEALRRAPGPDPAGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHPALVEEIERSMQRQGG 981
[Close]
BLAST of mRNA_L-elsbetiae_contig5921.14396.1 vs. uniprot
Match: A0A6H5JXN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN6_9PHAE)

HSP 1 Score: 268 bits (685), Expect = 2.690e-78
Identity = 131/136 (96.32%), Postives = 132/136 (97.06%), Query Frame = 1 
Query:    1 IAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHNYPDKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRAPGPDSAGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVANHPALVEEIERSMQRQQG 408
            IAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHNYP+KELRITGIL GSLIQHQLVSSITLGIALRYVLEALRRAPGPD AGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLV NHPALVEEIERSMQRQ G
Sbjct:  874 IAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHNYPEKELRITGILLGSLIQHQLVSSITLGIALRYVLEALRRAPGPDPAGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHPALVEEIERSMQRQGG 1009
[Close]
BLAST of mRNA_L-elsbetiae_contig5921.14396.1 vs. uniprot
Match: A0A7S2RR73_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RR73_9STRA)

HSP 1 Score: 215 bits (548), Expect = 2.680e-67
Identity = 107/132 (81.06%), Postives = 118/132 (89.39%), Query Frame = 1 
Query:    1 IAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHNYPDKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRAPGPDSAGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVANHPALVEEIERSMQ 396
            I ML+RFK+SS+ REQEIFACM+HNLFDEYRFFH YP+KELRITGILFG+LIQHQLVSSITLGIALRYVLEALR+      +GKMFRFGMFALEQFK RL EWPQYCSHIVQI +L ANHP LVEEI+R+MQ
Sbjct:   19 IEMLKRFKTSSNQREQEIFACMIHNLFDEYRFFHKYPEKELRITGILFGTLIQHQLVSSITLGIALRYVLEALRKPHW--QSGKMFRFGMFALEQFKARLSEWPQYCSHIVQIDYLNANHPDLVEEIKRAMQ 148
[Close]
BLAST of mRNA_L-elsbetiae_contig5921.14396.1 vs. uniprot
Match: A0A7S2G852_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G852_9STRA)

HSP 1 Score: 219 bits (558), Expect = 1.420e-65
Identity = 105/136 (77.21%), Postives = 119/136 (87.50%), Query Frame = 1 
Query:    1 IAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHNYPDKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRAPGPDSAGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVANHPALVEEIERSMQRQQG 408
            I ML++FK+S + REQEIFACM+HNLFDEYRFFH YP+KELRITGILFG+LIQHQLVSSITLGIALRYVLEALR+APG  + GKMFRFGMFALEQFK RL EWPQYCSHIVQI HL   H  LV+EI+R+M+  +G
Sbjct:  277 IDMLKKFKTSPNQREQEIFACMIHNLFDEYRFFHKYPEKELRITGILFGTLIQHQLVSSITLGIALRYVLEALRKAPGSGANGKMFRFGMFALEQFKARLYEWPQYCSHIVQIDHLCQQHAELVDEIQRAMKSSKG 412
[Close]
BLAST of mRNA_L-elsbetiae_contig5921.14396.1 vs. uniprot
Match: W7TUR4_9STRA (Ccr4-not transcription n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUR4_9STRA)

HSP 1 Score: 226 bits (577), Expect = 8.110e-64
Identity = 107/134 (79.85%), Postives = 119/134 (88.81%), Query Frame = 1 
Query:    1 IAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHNYPDKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRAPGPDSAGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVANHPALVEEIERSMQRQ 402
            I ML+RFKSS D +E EIFACM+ NLFDEYRFFH YP+KELRITGILFGSLIQHQLVSS+TLG+ALRYVLEALRR PGP +AGK +RFGMFALEQF+GRL EWPQYCSH++QIPHL  NHP LV EIER+M RQ
Sbjct:  758 IEMLKRFKSSKDAKELEIFACMIRNLFDEYRFFHKYPEKELRITGILFGSLIQHQLVSSLTLGVALRYVLEALRRPPGPGNAGKWYRFGMFALEQFQGRLHEWPQYCSHLIQIPHLRQNHPDLVLEIERAMSRQ 891
[Close]
BLAST of mRNA_L-elsbetiae_contig5921.14396.1 vs. uniprot
Match: A0A835ZHM2_9STRA (CCR4-Not complex component, Not1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHM2_9STRA)

HSP 1 Score: 218 bits (556), Expect = 5.290e-61
Identity = 103/131 (78.63%), Postives = 113/131 (86.26%), Query Frame = 1 
Query:    1 IAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHNYPDKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRAPGPDSAGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVANHPALVEEIERSM 393
            + ML RF++S D REQ+IFACMVHNLFDEYRFFH YP+KELRITG+LFG LIQ  LVSSITLGIALRYVLEALR+ PGP + GKMFRFGMFALEQFKGRLGEWPQYCSHI  I HL A HP LV E+ER+M
Sbjct:  827 LEMLRRFQASDDKREQDIFACMVHNLFDEYRFFHKYPEKELRITGVLFGMLIQQGLVSSITLGIALRYVLEALRKPPGPGAEGKMFRFGMFALEQFKGRLGEWPQYCSHIASIQHLAAQHPELVREMERAM 957
[Close]
BLAST of mRNA_L-elsbetiae_contig5921.14396.1 vs. uniprot
Match: A0A1Z5JVQ8_FISSO (CCR4-NOT transcription complex subunit 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JVQ8_FISSO)

HSP 1 Score: 207 bits (527), Expect = 3.990e-57
Identity = 100/135 (74.07%), Postives = 114/135 (84.44%), Query Frame = 1 
Query:    1 IAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHNYPDKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRAPGPDSAGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVANHPALVEEIERSMQRQQ 405
            + ML+RFK+S +++E EIFACMVHNLF+EYRFF+ YP+KELRITGILFG+LIQ QLVSSITLGIALRYVLEALR+ P   S GKMF+FGMFALEQFKGRL EWPQYCSHIVQIPHL   +  LV EIE  M + Q
Sbjct:  695 VEMLKRFKTSGNSKENEIFACMVHNLFNEYRFFNKYPEKELRITGILFGALIQEQLVSSITLGIALRYVLEALRKPPETTSTGKMFKFGMFALEQFKGRLHEWPQYCSHIVQIPHLKEKYAELVAEIESEMNKSQ 829
[Close]
BLAST of mRNA_L-elsbetiae_contig5921.14396.1 vs. uniprot
Match: A0A7S2YLA2_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YLA2_9STRA)

HSP 1 Score: 206 bits (524), Expect = 9.950e-57
Identity = 102/137 (74.45%), Postives = 116/137 (84.67%), Query Frame = 1 
Query:    1 IAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHNYPDKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRAPGPD----SAGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVANHPALVEEIERSMQR 399
            + ML+RFK+S +++E EIFACMVHNLFDEYRFF  YP+KELRITGILFG+LIQ QLVSSITLGIALRYVLEALR+ P P     S+GKMF+FGMFALEQFKGRL EWPQYCSHIVQIPHL  N+  LV EIE+ M +
Sbjct:  457 VEMLKRFKTSGNSKENEIFACMVHNLFDEYRFFAKYPEKELRITGILFGALIQEQLVSSITLGIALRYVLEALRKPPTPQGSTTSSGKMFKFGMFALEQFKGRLHEWPQYCSHIVQIPHLKDNYGELVAEIEQEMAK 593
[Close]
BLAST of mRNA_L-elsbetiae_contig5921.14396.1 vs. uniprot
Match: A0A7S4W626_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W626_9STRA)

HSP 1 Score: 204 bits (519), Expect = 4.630e-56
Identity = 101/137 (73.72%), Postives = 113/137 (82.48%), Query Frame = 1 
Query:    1 IAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHNYPDKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRAPGPD------SAGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVANHPALVEEIERSM 393
            + ML+RFK S + RE +IFACM+HNLFDEYRFF  YP+KELRITGILFG LIQHQLVSSITLGIALRYVLEALR+ P P       ++GKMFRFGMFALEQFKGRL EWPQYCSHIVQIPHL   +  LV+EIE +M
Sbjct:  576 VEMLKRFKISGNARENDIFACMIHNLFDEYRFFSKYPEKELRITGILFGMLIQHQLVSSITLGIALRYVLEALRKPPTPSVSTPNSNSGKMFRFGMFALEQFKGRLHEWPQYCSHIVQIPHLREKYSLLVDEIEGTM 712
[Close]
BLAST of mRNA_L-elsbetiae_contig5921.14396.1 vs. uniprot
Match: A0A7S4RY41_9STRA (Hypothetical protein n=10 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RY41_9STRA)

HSP 1 Score: 204 bits (519), Expect = 4.750e-56
Identity = 101/137 (73.72%), Postives = 113/137 (82.48%), Query Frame = 1 
Query:    1 IAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHNYPDKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRAPGPD------SAGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVANHPALVEEIERSM 393
            + ML+RFK S + RE +IFACM+HNLFDEYRFF  YP+KELRITGILFG LIQHQLVSSITLGIALRYVLEALR+ P P       ++GKMFRFGMFALEQFKGRL EWPQYCSHIVQIPHL   +  LV+EIE +M
Sbjct:  843 VEMLKRFKISGNARENDIFACMIHNLFDEYRFFSKYPEKELRITGILFGMLIQHQLVSSITLGIALRYVLEALRKPPTPSVSTPNSNSGKMFRFGMFALEQFKGRLHEWPQYCSHIVQIPHLREKYSLLVDEIEGTM 979
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5921.14396.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMN3_ECTSI2.550e-7996.32CNOT1_TTP_bind domain-containing protein (Fragment... [more]
A0A6H5JXN6_9PHAE2.690e-7896.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2RR73_9STRA2.680e-6781.06Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2G852_9STRA1.420e-6577.21Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
W7TUR4_9STRA8.110e-6479.85Ccr4-not transcription n=2 Tax=Monodopsidaceae Tax... [more]
A0A835ZHM2_9STRA5.290e-6178.63CCR4-Not complex component, Not1-domain-containing... [more]
A0A1Z5JVQ8_FISSO3.990e-5774.07CCR4-NOT transcription complex subunit 1 n=2 Tax=F... [more]
A0A7S2YLA2_9STRA9.950e-5774.45Hypothetical protein n=2 Tax=Amphiprora paludosa T... [more]
A0A7S4W626_9STRA4.630e-5673.72Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4RY41_9STRA4.750e-5673.72Hypothetical protein n=10 Tax=Ditylum brightwellii... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5921contigL-elsbetiae_contig5921:8817..9995 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score264.6
Seed ortholog evalue5e-68
Seed eggNOG ortholog2880.D8LMN3
KEGG koko:K12604
KEGG Pathwayko03018,map03018
Hectar predicted targeting categoryother localisation
GOsGO:0000288,GO:0000289,GO:0000932,GO:0000956,GO:0003674,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006401,GO:0006402,GO:0006417,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016070,GO:0016071,GO:0017148,GO:0018130,GO:0019222,GO:0019438,GO:0019439,GO:0030014,GO:0030015,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032774,GO:0032947,GO:0032991,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0035770,GO:0036464,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576,GO:1990904,GO:2000112,GO:2000113
EggNOG free text desc.nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
EggNOG OGsCOG5103@1,KOG1831@2759
COG Functional cat.DK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019
Exons3
Model size825
Cds size819
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5921.14396.1prot_L-elsbetiae_contig5921.14396.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5921 8823..9995 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816640.4908988-UTR-L-elsbetiae_contig5921:8816..88221622816640.4908988-UTR-L-elsbetiae_contig5921:8816..8822Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5921 8817..8822 +
1691683705.2809975-UTR-L-elsbetiae_contig5921:8816..88221691683705.2809975-UTR-L-elsbetiae_contig5921:8816..8822Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5921 8817..8822 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816640.5032182-CDS-L-elsbetiae_contig5921:8822..92961622816640.5032182-CDS-L-elsbetiae_contig5921:8822..9296Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5921 8823..9296 +
1691683705.2921367-CDS-L-elsbetiae_contig5921:8822..92961691683705.2921367-CDS-L-elsbetiae_contig5921:8822..9296Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5921 8823..9296 +
1622816640.5128043-CDS-L-elsbetiae_contig5921:9413..96521622816640.5128043-CDS-L-elsbetiae_contig5921:9413..9652Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5921 9414..9652 +
1691683705.3033795-CDS-L-elsbetiae_contig5921:9413..96521691683705.3033795-CDS-L-elsbetiae_contig5921:9413..9652Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5921 9414..9652 +
1622816640.5231273-CDS-L-elsbetiae_contig5921:9889..99951622816640.5231273-CDS-L-elsbetiae_contig5921:9889..9995Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5921 9890..9995 +
1691683705.3169887-CDS-L-elsbetiae_contig5921:9889..99951691683705.3169887-CDS-L-elsbetiae_contig5921:9889..9995Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5921 9890..9995 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5921.14396.1

>prot_L-elsbetiae_contig5921.14396.1 ID=prot_L-elsbetiae_contig5921.14396.1|Name=mRNA_L-elsbetiae_contig5921.14396.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=273bp
MLERFKSSSDTREQEIFACMVHNLFDEYRFFHNYPDKELRITGILFGSLI
QHQLVSSITLGIALRYVLEALRRAPGPDSAGKMFRFGMFALEQFKGRLGE
WPQYCSHIVQIPHLVANHPALVEEIERSMQRQQGSGGAAGGDGGGGGAVA
GAGAPAAEQGDDGQQLGQQQQQQQQSQLLAARAKGAEGAIGESSSSSVAG
GGQQQQGQQQQQQQQQQQQQRLPPGPSTPGRVGGAGTSAGPSAMQQMSQQ
QAQAQAQQQQQQQQQGQGQQQGQ
back to top

mRNA from alignment at L-elsbetiae_contig5921:8817..9995+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5921.14396.1 ID=mRNA_L-elsbetiae_contig5921.14396.1|Name=mRNA_L-elsbetiae_contig5921.14396.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1179bp|location=Sequence derived from alignment at L-elsbetiae_contig5921:8817..9995+ (Laminarionema elsbetiae ELsaHSoW15)
ATTGCGATGCTGGAGCGCTTCAAGTCGTCCTCGGACACCCGCGAGCAGGA
GATCTTCGCGTGCATGGTGCACAACCTGTTCGACGAGTACCGGTTCTTCC
ACAACTACCCCGACAAGGAACTCCGCATCACGGGCATCCTCTTCGGCTCG
CTCATCCAGCACCAGCTCGTGAGCTCCATCACGCTCGGCATCGCGCTCCG
CTACGTGCTCGAGGCGCTGCGCCGCGCGCCCGGGCCGGACTCGGCCGGCA
AGATGTTCCGGTTCGGGATGTTCGCGCTGGAGCAATTCAAGGGCCGCCTG
GGGGAGTGGCCGCAGTACTGCAGCCACATCGTGCAGATCCCGCACCTGGT
GGCAAACCACCCGGCCCTCGTCGAGGAGATCGAGAGGTCCATGCAGAGGC
AGCAAGGAAGCGGGGGCGCCGCGGGCGGGGACGGGGGAGGGGGCGGCGCA
GTCGCCGGGGCCGGGGCCCCCGCCGCGGAGGTCGGTGCGGTGGCGGCGGC
GTTGGGTCAGATCGTGGCGGCGGCGGCGCCCTCGAATCTTGCGGAGTCGG
TGAACGCGACGTCTGTCGGCGGTCCGATCGGCCGGCCCCCGCACCAGCAG
GGGGATGACGGCCAGCAGCTGGGCCAGCAGCAGCAGCAGCAGCAGCAGTC
CCAGCTGCTGGCGGCGAGGGCGAAGGGAGCCGAAGGAGCGATCGGAGAGT
CATCCTCGTCGTCGGTCGCCGGCGGCGGACAGCAGCAGCAGGGGCAGCAG
CAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGTTGCCACCAGGACC
AAGCACCCCTGGCCGCGTTGGCGGGGCGGGAACCTCGTCGATGCCCCCGG
TGGCCAGGAGCCCCGGGGCCGAGCAGGGCCTGGGGAGGGCGGGGGGGGAC
CCCCACCAGCTCATGGGTCAGGGCGCGGTCGCCGGGAGTCACGGCGGCAT
GGGCGGTCTCGGTGTTGGGGTCGGGGGAGGAGGAGGAGGCGTCGGCGGCC
TGGGCATGTCGATGGGCCTGGGGGGCCAGTCGCAGGCAGGAGGAGGCTTG
GGCCAGATCGGCGGGGGGCAGAGGGCAGGGCCGTCCGCGATGCAGCAGAT
GTCGCAACAGCAGGCGCAGGCCCAAGCCCAGCAGCAGCAGCAGCAGCAGC
AGCAGGGGCAAGGGCAGCAGCAGGGGCAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig5921:8817..9995+

>mRNA_L-elsbetiae_contig5921.14396.1 ID=mRNA_L-elsbetiae_contig5921.14396.1|Name=mRNA_L-elsbetiae_contig5921.14396.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1638bp|location=Sequence derived from alignment at L-elsbetiae_contig5921:8817..9995+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCTGGAGCGCTTCAAGTCGTCCTCGGACACCCGCGAGCAGGAGATCTT
CGCGTGCATGGTGCACAACCTGTTCGACGAGTACCGGTTCTTCCACAACT
ACCCCGACAAGGAACTCCGCATCACGGGCATCCTCTTCGGCTCGCTCATC
CAGCACCAGCTCGTGAGCTCCATCACGCTCGGCATCGCGCTCCGCTACGT
GCTCGAGGCGCTGCGCCGCGCGCCCGGGCCGGACTCGGCCGGCAAGATGT
TCCGGTTCGGGATGTTCGCGCTGGAGCAATTCAAGGGCCGCCTGGGGGAG
TGGCCGCAGTACTGCAGCCACATCGTGCAGATCCCGCACCTGGTGGCAAA
CCACCCGGCCCTCGTCGAGGAGATCGAGAGGTCCATGCAGAGGCAGCAAG
GAAGCGGGGGCGCCGCGGGCGGGGACGGGGGAGGGGGCGGCGCAGTCGCC
GGGGCCGGGGCCCCCGCCGCGGAGATGCTGGAGCGCTTCAAGTCGTCCTC
GGACACCCGCGAGCAGGAGATCTTCGCGTGCATGGTGCACAACCTGTTCG
ACGAGTACCGGTTCTTCCACAACTACCCCGACAAGGAACTCCGCATCACG
GGCATCCTCTTCGGCTCGCTCATCCAGCACCAGCTCGTGAGCTCCATCAC
GCTCGGCATCGCGCTCCGCTACGTGCTCGAGGCGCTGCGCCGCGCGCCCG
GGCCGGACTCGGCCGGCAAGATGTTCCGGTTCGGGATGTTCGCGCTGGAG
CAATTCAAGGGCCGCCTGGGGGAGTGGCCGCAGTACTGCAGCCACATCGT
GCAGATCCCGCACCTGGTGGCAAACCACCCGGCCCTCGTCGAGGAGATCG
AGAGGTCCATGCAGAGGCAGCAAGGAAGCGGGGGCGCCGCGGGCGGGGAC
GGGGGAGGGGGCGGCGCAGTCGCCGGGGCCGGGGCCCCCGCCGCGGAGCA
GGGGGATGACGGCCAGCAGCTGGGCCAGCAGCAGCAGCAGCAGCAGCAGT
CCCAGCTGCTGGCGGCGAGGGCGAAGGGAGCCGAAGGAGCGATCGGAGAG
TCATCCTCGTCGTCGGTCGCCGGCGGCGGACAGCAGCAGCAGGGGCAGCA
GCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGTTGCCACCAGGAC
CAAGCACCCCTGGCCGCGTTGGCGGGGCGGGAACCTCCAGGGGGATGACG
GCCAGCAGCTGGGCCAGCAGCAGCAGCAGCAGCAGCAGTCCCAGCTGCTG
GCGGCGAGGGCGAAGGGAGCCGAAGGAGCGATCGGAGAGTCATCCTCGTC
GTCGGTCGCCGGCGGCGGACAGCAGCAGCAGGGGCAGCAGCAACAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCGGTTGCCACCAGGACCAAGCACCCCT
GGCCGCGTTGGCGGGGCGGGAACCTCGGCAGGGCCGTCCGCGATGCAGCA
GATGTCGCAACAGCAGGCGCAGGCCCAAGCCCAGCAGCAGCAGCAGCAGC
AGCAGCAGGGGCAAGGGCAGCAGCAGGGGCAGGGCAGGGCCGTCCGCGAT
GCAGCAGATGTCGCAACAGCAGGCGCAGGCCCAAGCCCAGCAGCAGCAGC
AGCAGCAGCAGCAGGGGCAAGGGCAGCAGCAGGGGCAG
back to top