prot_L-elsbetiae_contig5887.14349.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5887.14349.1
Unique Nameprot_L-elsbetiae_contig5887.14349.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length619
Homology
BLAST of mRNA_L-elsbetiae_contig5887.14349.1 vs. uniprot
Match: D7G1T1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T1_ECTSI)

HSP 1 Score: 828 bits (2140), Expect = 5.720e-288
Identity = 480/628 (76.43%), Postives = 542/628 (86.31%), Query Frame = 0
Query:    1 RYTVGVQDGNVDPIKCGMTGADVPALLSRQLATDGIVLNPPSPVPVEEEES--KEKSGGLFTCGEDHADEDLEVRDNPKELE-ETKEREQFFASNGVPYPVYVPPGPSSQGHRRMARFVGTMKNAVWGFDPDHVFVLSKPAVVAQTHMPTFKEAEKHNLLQPLSAVPPAAKVLYVSHRWTDQGEPDTQDGHAFMQVKRYLEEHSGDNIQYIWMDVSCIDVFDKETVRYDQYMSNVVTVLSRATHMLAVPPCKTLDPRALIRDMAVARMAEKQAAAGKSPD--GSSSGR----DAAVARAVEEEVDAAILSRQVARPDKWSRVVLGADGGSDGSGGLSTATATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGRRRSSAGMGSKKSSTVAETVEQATAVEDGGPGVPVLSKKEKKAMLVAEAREDAAAAAAEVTHDVSQTPTVLTAPVLYSDPASLLGRGWVEMEVSLALVFGVEVLVCARWGPKVTFQSVLARSLMSEDGETEEQAPGFKGAFLHGVARIAPDVEEVKGFVVGVKRAIIGPERTADPTVPVRVVYAPMLEHCHEPQTVVSPLVRASLALHNEGALLPFLAGDIAPVDVMYRLSGVSV 619
            RY VGVQDGNVDP+KCG+ GAD+P+LLSRQLATDGI LNP             KEKSGGLFTCGED+ADED+E  D+P+ELE ETK +E FFASNGVPYPV+VPPGPSSQGHRRMARFV TMKNAVWGFDP+ VF+L+KPAV+AQ++MPTFKEA++H+LL+P+S++PPAAKVLYVSHRWT  GEPDTQD HAFMQV+RYL+EHSGDNIQYIW+DVSC+DV +++ VRY+QYMSNVVTVL+R+THMLAVPPCKTLDPRAL+RDM VAR+ EKQ A GKSPD  G   GR    D AV++A+EEEVDAAILSRQ++ P+KWS + + +   SDG          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        K RR  S+GMGSKKSS + E   + TAV DGGPGVPVLSKKEKK  LVA+AREDAA AAAEVTHDVSQTPTVLT PVL+SDPA+LL RGWVEMEVSLALVFGVEVLVC RWGPKVTFQSVLAR+L+SEDGET EQ PGF+GAFLHG+ARIAPDVEEVKGFVVG+KRA+IGPERTADPTVPVRVVY PMLEHCHEPQTVVSPLVRASLALHNEGALLPFLAGD++PVD+MYRLSG+++
Sbjct:  353 RYVVGVQDGNVDPVKCGVPGADLPSLLSRQLATDGIALNPXXXXXXXXXXXXXKEKSGGLFTCGEDNADEDVEPVDSPRELEQETKNQENFFASNGVPYPVFVPPGPSSQGHRRMARFVDTMKNAVWGFDPEQVFLLTKPAVLAQSYMPTFKEAQEHHLLEPMSSLPPAAKVLYVSHRWTGIGEPDTQDAHAFMQVQRYLKEHSGDNIQYIWIDVSCMDVGNRDNVRYEQYMSNVVTVLARSTHMLAVPPCKTLDPRALVRDMTVARLVEKQTAEGKSPDYLGXXXGRKTKGDEAVSKAIEEEVDAAILSRQLSHPEKWSSLAVDS---SDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKKGPSGRKSRR--SSGMGSKKSSAM-EVKTEITAVGDGGPGVPVLSKKEKKGFLVAQAREDAAEAAAEVTHDVSQTPTVLTEPVLHSDPAALLNRGWVEMEVSLALVFGVEVLVCVRWGPKVTFQSVLARTLVSEDGETVEQGPGFRGAFLHGIARIAPDVEEVKGFVVGMKRALIGPERTADPTVPVRVVYEPMLEHCHEPQTVVSPLVRASLALHNEGALLPFLAGDVSPVDIMYRLSGLAL 974          
BLAST of mRNA_L-elsbetiae_contig5887.14349.1 vs. uniprot
Match: A0A6H5KEL6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEL6_9PHAE)

HSP 1 Score: 801 bits (2070), Expect = 1.120e-278
Identity = 481/664 (72.44%), Postives = 547/664 (82.38%), Query Frame = 0
Query:    1 RYTVGVQDGNVDPIKCGMTGADVPALLSRQLATDGIVLNPP-SPVPVEE-EESKEKSGGLFTCGEDHADEDLEVRDNPKELE-ETKEREQFFASNGVPYPVYVPPGPSSQGHRRMARFVGTMKNAVWGFDPDHVFVLSKPAVVAQTHMPTFKEAEKHNLLQPLSAVPPAAKVLYVSHRWTDQGEPDTQDGHAFMQVKRYLEEHSGDNIQYIWMDVSCIDVFDKETVRYDQYMSNVVTVLSRATHMLAVPPCKTLDPRALIRDMAVARMAEKQAAAGKSPD-------------------------------------GSSSGR----DAAVARAVEEEVDAAILSRQVARPDKWSRVVLGADGGSDGSGGLSTATATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGRR-RSSAGMGSKKSSTVAETVEQATAVEDGGPGVPVLSKKEKKAMLVAEAREDAAAAAAEVTHDVSQTPTVLTAPVLYSDPASLLGRGWVEMEVSLALVFGVEVLVCARWGPKVTFQSVLARSLMSEDGETEEQAPGFKGAFLHGVARIAPDVEEVKGFVVGVKRAIIGPERTADPTVPVRVVYAPMLEHCHEPQTVVSPLVRASLALHNEGALLPFLAGDIAPVDVMYRLSGVSV 619
            RY VGVQDGNVDPIKCG+ GAD+P+LLSRQLATDGI LNPP +P P EE EE+KEKSGGLFTCGED+AD D+E  ++P+ELE ETK+++ FFASNGVPYPV+VPPGPSSQGHRRMARFV TMKNAVWGFDP+ VFVL+KPAV+AQ++MPTFKEA++ +LL+P+S++ PAAKVLYVSHRW   GEPDTQD HA +QV+RYL+EHSGDNIQYIW+DVSC+DV +++ VRY+QYMSNVVTVL+R+THMLAVPPCKTLDPRAL+RDM VAR+ EKQ A GKSP+                                     GS  GR    + AVA+A+EEEVDAAILSRQ++ PDKWS +V+                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     GR+ R   GMGS+KSS V E   + TAV D GPGVPVLSKKEKK +LVA+AREDAA AAAEVTHDVSQTPTVL  P+L+SDPA+LL RGWVEMEVSLALVFGVEVLVC RWGPKVTFQSVLAR+L+SEDGE+ EQ PGFKGAFLHG+ARIAPDVEEVKGFVVGVKRA+IGPERTADPTVPVRVVY PMLEHCHEPQTVVSPLVRASLALHNEGALLPFLAGD++PVD+MYRLSG+++
Sbjct:  353 RYVVGVQDGNVDPIKCGVLGADLPSLLSRQLATDGIALNPPPTPPPGEEGEETKEKSGGLFTCGEDNAD-DVEPVNSPRELEQETKDQDHFFASNGVPYPVFVPPGPSSQGHRRMARFVDTMKNAVWGFDPEQVFVLTKPAVLAQSYMPTFKEAQERHLLEPMSSLHPAAKVLYVSHRWAGIGEPDTQDAHALLQVQRYLKEHSGDNIQYIWIDVSCMDVGNRDNVRYEQYMSNVVTVLARSTHMLAVPPCKTLDPRALVRDMTVARLVEKQTAEGKSPEYLKMLPTTTSNAVGSGFASAAPFLANGGGGPAPSTTIGSGGGRKTKGNEAVAKAIEEEVDAAILSRQLSHPDKWSSLVV-----DSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKRASGRKSRXXXGMGSRKSSAV-EVKTETTAVGDRGPGVPVLSKKEKKELLVAQAREDAAEAAAEVTHDVSQTPTVLKEPILHSDPAALLNRGWVEMEVSLALVFGVEVLVCVRWGPKVTFQSVLARTLVSEDGESVEQGPGFKGAFLHGIARIAPDVEEVKGFVVGVKRALIGPERTADPTVPVRVVYEPMLEHCHEPQTVVSPLVRASLALHNEGALLPFLAGDVSPVDIMYRLSGLAL 1009          
BLAST of mRNA_L-elsbetiae_contig5887.14349.1 vs. uniprot
Match: A0A7S2XWF9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWF9_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 8.890e-6
Identity = 34/86 (39.53%), Postives = 47/86 (54.65%), Query Frame = 0
Query:  169 VLYVSHRWTDQGEPDTQDGHAFMQVKRYLEE--HSGDNIQYIWMDVSCIDVFD------KETVRYDQYMSNVVTVLSRATHMLAVP 246
            VL+VSHRW  + EPD   G  F  +K YL E    G+ IQYIW+D SC+   D      K+  R  + + NV T +  ++H L +P
Sbjct:   60 VLFVSHRWASETEPDDAGGSQFAMIKSYLTELRGKGEMIQYIWIDCSCVAPVDSSESGAKKQARRLEVL-NVPTAIWISSHALLLP 144          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5887.14349.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G1T1_ECTSI5.720e-28876.43Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KEL6_9PHAE1.120e-27872.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2XWF9_9STRA8.890e-639.53Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5887contigL-elsbetiae_contig5887:317..11116 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5887.14349.1mRNA_L-elsbetiae_contig5887.14349.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5887 317..11116 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5887.14349.1 ID=prot_L-elsbetiae_contig5887.14349.1|Name=mRNA_L-elsbetiae_contig5887.14349.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=619bp
RYTVGVQDGNVDPIKCGMTGADVPALLSRQLATDGIVLNPPSPVPVEEEE
SKEKSGGLFTCGEDHADEDLEVRDNPKELEETKEREQFFASNGVPYPVYV
PPGPSSQGHRRMARFVGTMKNAVWGFDPDHVFVLSKPAVVAQTHMPTFKE
AEKHNLLQPLSAVPPAAKVLYVSHRWTDQGEPDTQDGHAFMQVKRYLEEH
SGDNIQYIWMDVSCIDVFDKETVRYDQYMSNVVTVLSRATHMLAVPPCKT
LDPRALIRDMAVARMAEKQAAAGKSPDGSSSGRDAAVARAVEEEVDAAIL
SRQVARPDKWSRVVLGADGGSDGSGGLSTATATGKEGGGAGGAPSREAGA
GGGAGIPPRPSTGGGAPATAPAAAASASGKDKKGRRRSSAGMGSKKSSTV
AETVEQATAVEDGGPGVPVLSKKEKKAMLVAEAREDAAAAAAEVTHDVSQ
TPTVLTAPVLYSDPASLLGRGWVEMEVSLALVFGVEVLVCARWGPKVTFQ
SVLARSLMSEDGETEEQAPGFKGAFLHGVARIAPDVEEVKGFVVGVKRAI
IGPERTADPTVPVRVVYAPMLEHCHEPQTVVSPLVRASLALHNEGALLPF
LAGDIAPVDVMYRLSGVSV
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