mRNA_L-elsbetiae_contig5843.14297.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5843.14297.1
Unique NamemRNA_L-elsbetiae_contig5843.14297.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig5843.14297.1 vs. uniprot
Match: D7FS22_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS22_ECTSI)

HSP 1 Score: 861 bits (2224), Expect = 1.300e-294
Identity = 592/825 (71.76%), Postives = 643/825 (77.94%), Query Frame = 1 
Query:    7 GKSRGKNEDEDSGGGARSGPKPVRIKLDKEGRDVILDILHKLHVAGAGDGAXXXXXXXXXXXXXXXXXXXXRQGSSXXXXXXX--SEPDIEVDDSDGSDDDGEGFVDRQGHGDFEYDGSFGDMANLMSDLVVNEAALPAAADDGSGDKPAPSPAGATSAISKDSAEEARLASAGPAKSGSGSRKSSPTTGAKKREDREQVKNPLXXXXXXXXXXXXXXXXXXGAARSNVTREKLLASMVQEDRKTSREAQKGVGAVPSAAIHAASTVGGGGVGGAAARGYQRPDPPGAGKGNDKVRLEVCGENKKTGAPDLNGKKILVFDRKEPILKMLNTCRGKLHIKKKAKGAALLEGDEVVDWLSDLSWVPNGAVVLISCAGAAGSKAKPSPPKSXXXXXXXXXXXXXXXXXXXXXXXVASAEVPAASGE-GYQTEQGADEDEEEALALAALGRIRESYRTRAKERQSAATGRARS-DASDQEAGKRMLDRRREVESTAQSRQMMAQRQSLPAHLQREDIVETIRDNQVVVLSGETGCGKTTQVPQFVLDDLIDQGEGGKCNIICTQPRRISAVGVADRVASERCEKVGGTVGYQIRLDSRVGPSTRLTFCTTGILLRRLTSDDTLAGVSHIMVDEVHERDLQTDFLLVILRDLLPKRPDLRVVLMSATLQADLFTEYFNGCPSITIPGRTFPVKITYMDDVNRILRGGKTPAVMPRVSSGAEVVVGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEGDDDAAPTAYDPLTGEPLELDGXXXXXXXXXXXXXXTASVSPKCEDKVDYDIMVDLVDHIMKTEGNGG 2469
            GKS+ KN+D D       G KPVR+KLD+EGRD ILDILHKLHVAGA D A       XXXXXXXXXXXX   G  XXXXXXX  S+ D+E+DD             RQ HGDFEYDGSFGDMANLMS LVVN++A                   A SA+      EA  +SAG          S P  GA K           XXXXXXXXXXXXXXXXXX   RSNVTREKLLASMVQEDRKTS++A +  G V SAAIHAASTVGGG V GA ARGYQRPDPPGAGKGNDKVRLEVCGE+KKTGAPDLNGKKILVFDRKEP+L  LNTCRGKLHIKKKAKGAAL+EG+EVVDWLSDLSWVPNGAVVLISC   AG   + +P  +XXXXXXXXXXXXXXXXXXXXX      E+ AA  E G + E+        A+ALAALGRIRE+YR RA+ERQS A G AR  D SD+EAGKRM+D+RREVESTAQSRQMMAQR++LPA+LQREDIV+TIRDNQVVVLSGETGCGKTTQVPQFVLDDLIDQGEGGKCNIICTQPRRISAVGVADRVASERCE+VGGTVGYQIRLDSRVGPSTRLTFCTTGILLRRLTSDDTLAGVSH+MVDEVHERDLQTDFLLVILRDLLPKRPDLRVVLMSATLQADLFT+YF+ CP+IT+PGRTFPV++TYMD+VNR++RG +TPA+MPRVSSGA VV GRG   XXX      XXXXXXXXXXXXXXXXXXXX  E DD   P AYDPLTGEPLEL                +A VSPKCEDKVDYD+MVDLVDHIM+TEG+GG
Sbjct:   52 GKSKAKNKDGDDDNTRGGGLKPVRLKLDEEGRDAILDILHKLHVAGAEDSAEDETDGSXXXXXXXXXXXXEAGGXXXXXXXXXXGSDADVEIDD-------------RQDHGDFEYDGSFGDMANLMSGLVVNDSAP------------------AESAVFM----EASKSSAG---------NSLPMPGATKERQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSNVTREKLLASMVQEDRKTSKQAPREAGGVSSAAIHAASTVGGGPVSGAVARGYQRPDPPGAGKGNDKVRLEVCGESKKTGAPDLNGKKILVFDRKEPLLGFLNTCRGKLHIKKKAKGAALVEGEEVVDWLSDLSWVPNGAVVLISCTSGAGGTKEKAPVATXXXXXXXXXXXXXXXXXXXXXSKHDGGEISAAPPEAGGEGERQXXXXXXXAVALAALGRIRETYRARARERQSGAAGHARGGDVSDKEAGKRMMDKRREVESTAQSRQMMAQRRNLPAYLQREDIVKTIRDNQVVVLSGETGCGKTTQVPQFVLDDLIDQGEGGKCNIICTQPRRISAVGVADRVASERCERVGGTVGYQIRLDSRVGPSTRLTFCTTGILLRRLTSDDTLAGVSHVMVDEVHERDLQTDFLLVILRDLLPKRPDLRVVLMSATLQADLFTKYFHDCPAITVPGRTFPVEVTYMDEVNRLVRGTRTPAIMPRVSSGAGVVGGRGHGRXXXGALADPXXXXXXXXXXXXXXXXXXXXXSEADDGETPAAYDPLTGEPLEL---GEDDGATSAAAAASAMVSPKCEDKVDYDVMVDLVDHIMRTEGDGG 829
[Close]
BLAST of mRNA_L-elsbetiae_contig5843.14297.1 vs. uniprot
Match: A0A7S4JSU1_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4JSU1_GUITH)

HSP 1 Score: 257 bits (656), Expect = 2.170e-75
Identity = 124/206 (60.19%), Postives = 161/206 (78.16%), Query Frame = 1 
Query: 1462 STAQSRQMMAQRQSLPAHLQREDIVETIRDNQVVVLSGETGCGKTTQVPQFVLDDLIDQGEGGKCNIICTQPRRISAVGVADRVASERCEKVGGTVGYQIRLDSRVGPSTRLTFCTTGILLRRLTSDDTLAGVSHIMVDEVHERDLQTDFLLVILRDLLPKRPDLRVVLMSATLQADLFTEYFNGCPSITIPGRTFPVKITYMDDV 2079
            S +  ++MM  R+ LP+   RE+++  IR ++VVV+SGETGCGKTTQVPQF+LDD+  QG G +CNIICTQPRRISA+ VADRVA+ERCE +G TVGYQIRL+ +    TRL FCTTG+LLRRL  D  L+GVSH++VDE+HER +  DF+L+IL+DLL   P L++VLMSATL A  F EYF+GCP + IPG TFPV+  +++D+
Sbjct:   86 SRSDMKKMMEGRKRLPSFSMREEVLSVIRSSRVVVVSGETGCGKTTQVPQFILDDMDAQGLGSQCNIICTQPRRISAISVADRVANERCETLGDTVGYQIRLEVKRSERTRLLFCTTGVLLRRLVVDPELSGVSHVIVDEIHERGINEDFILIILKDLLRANPSLKIVLMSATLNAQHFQEYFSGCPLLHIPGFTFPVQDVFLEDL 291
[Close]
BLAST of mRNA_L-elsbetiae_contig5843.14297.1 vs. uniprot
Match: A0A7S3CC51_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CC51_9CHLO)

HSP 1 Score: 259 bits (661), Expect = 4.340e-75
Identity = 127/217 (58.53%), Postives = 173/217 (79.72%), Query Frame = 1 
Query: 1429 KRMLDRRREVESTAQSRQMMAQRQSLPAHLQREDIVETIRDNQVVVLSGETGCGKTTQVPQFVLDDLIDQGEGGKCNIICTQPRRISAVGVADRVASERCEKVGGTVGYQIRLDSRVGPSTRLTFCTTGILLRRLTSDDTLAGVSHIMVDEVHERDLQTDFLLVILRDLLPKRPDLRVVLMSATLQADLFTEYFNGCPSITIPGRTFPVKITYMDDV 2079
            KR+   + E  S+ + R+M+A R+ LPA+ +RE+++  I ++QV+V+SGETGCGKTTQVPQF+L+D I + +G  CNIICTQPRRISA+ V+DRVASER E++G +VGYQIRLD++    T+L FCTTG+LLR+L  +  L GVSHI+VDE+HER +  DFLL+ILRDLLP+RPDLRV+LMSATL A+ F++YF G   + IPG TFPV+ T+++D+
Sbjct:  154 KRLKTAQDEQLSSDRVRKMIAFREKLPAYSKREELLRQIEESQVLVISGETGCGKTTQVPQFILEDAIGKNKGFHCNIICTQPRRISAISVSDRVASERGERLGQSVGYQIRLDTKRSKDTKLLFCTTGVLLRKLVREPELEGVSHIIVDEIHERGMNEDFLLIILRDLLPRRPDLRVILMSATLNAESFSQYFGGANMMHIPGFTFPVEQTFLEDI 370
[Close]
BLAST of mRNA_L-elsbetiae_contig5843.14297.1 vs. uniprot
Match: W7T633_9STRA (Putative atp-dependent rna helicase dhx36 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T633_9STRA)

HSP 1 Score: 276 bits (705), Expect = 9.660e-75
Identity = 183/438 (41.78%), Postives = 259/438 (59.13%), Query Frame = 1 
Query:  880 KVRLEVCGENKKTGAPDLNGKKILVFDRKEPILKMLNTCRGKLHIKKKAKGAALLEGDEVVDWLSDLSWVPNGAVVLISCAGAAGSKAKPSPPKSXXXXXXXXXXXXXXXXXXXXXXXVASAEVPAASGEGY---QTEQGADEDEEEAL--ALAALGRIRESYRTRAKERQSAATGRARSDASDQEAGK--RMLDRRREVESTAQSR-QMMAQRQSLPAHLQREDIVETIRDNQVVVLSGETGCGKTTQVPQFVLDDLIDQGEGGKCNIICTQPRRISAVGVADRVASERCEKVGGTVGYQIRLDSRVGPSTRLTFCTTGILLRRLTSDDTLAGVSHIMVDEVHERDLQTDFLLVILRDLLPKRPDLRVVLMSATLQADLFTEYFNGCPSITIPGRTFPVKITYMDDVNRIL---RGGKTPAVMPRVS-SGAEVVVGR 2157
            KVRL +C EN         G+K++V +R++ +  + +  + KL IKK     A+L+  E    L +   V +GAVV++      G + K  PP+                         A   VPA   +     +  + A+  E E +   +A+L  ++++Y  R +    +  GR +   S + A +  R+ +  ++ E +++ +     QR SLPA  QRE I+E +  +QVVV+ GETG GKTTQ+PQF+LDD   +G+GG+CNI+CTQPRRISA+GVA+RVA ER EKVG TVGY +R ++R  P TRL FCTTG+LLRRL  D  LAGVSH++VDEVHER L++DFLL++L+DLL  RP+L+VVLMSATLQA LF+ YF+  P + IPGR F V   Y+DDV  ++   RG   P   PR S +G+    GR
Sbjct:  248 KVRLTLCNEN--------GGRKVVVLERRKDLKGLFDAAKNKLKIKKPMH--AILQSGEN---LGNTLLVGDGAVVVVK-----GKEGKGLPPR-------------------------ALPPVPAQKMDEQKRLEARESAERKEIEKVKETMASLAAVKKAYLKRNELDLKSEEGRGKLTESRERAFESLRLAELLQKKEGSSKYKGSFFEQRASLPAFSQREAILEAVAAHQVVVVEGETGSGKTTQLPQFILDDWSARGKGGECNIVCTQPRRISAIGVAERVAEERLEKVGETVGYSVRFNTRRSPQTRLLFCTTGVLLRRLAYDKDLAGVSHVLVDEVHERTLESDFLLIVLKDLLACRPELKVVLMSATLQASLFSSYFDNSPCLHIPGRAFQVSQLYLDDVEELVAGRRGPGRPRAAPRASRAGSHFARGR 642
[Close]
BLAST of mRNA_L-elsbetiae_contig5843.14297.1 vs. uniprot
Match: A0A6A2ZST2_HIBSY (Fatty acyl-ACP thioesterases B n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2ZST2_HIBSY)

HSP 1 Score: 254 bits (649), Expect = 7.680e-74
Identity = 120/225 (53.33%), Postives = 175/225 (77.78%), Query Frame = 1 
Query: 1435 MLDRRREVESTAQSRQMMAQRQSLPAHLQREDIVETIRDNQVVVLSGETGCGKTTQVPQFVLDDLIDQGEGGKCNIICTQPRRISAVGVADRVASERCEKVGGTVGYQIRLDSRVGPSTRLTFCTTGILLRRLTSDDTLAGVSHIMVDEVHERDLQTDFLLVILRDLLPKRPDLRVVLMSATLQADLFTEYFNGCPSITIPGRTFPVKITYMDDVNRILRGGKTP 2109
            + D+++E + + + ++M+  R+SLPA  +++ ++ +I  NQVVV+SGETGCGKTTQ+PQ++L+  ++ G G  C+IICTQPRRISA+ V++RVA+ER EK+G +VGY++RL+   G  TRL FCTTGILLRRL  D  L GVSH++VDE+HER +  DFLL++L+DLLP+RP+LR++LMSATL ADLF+ YF G P+I IPG T+PV+  +++++  I+    TP
Sbjct:   51 LRDKQQEWKESPEGQKMLEFRRSLPAFKEKDALLNSISQNQVVVVSGETGCGKTTQLPQYILESEVEAGRGASCSIICTQPRRISAMAVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLGDRDLRGVSHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLILMSATLNADLFSSYFGGAPTIHIPGFTYPVRAHFLENILEIIGYRLTP 275
[Close]
BLAST of mRNA_L-elsbetiae_contig5843.14297.1 vs. uniprot
Match: A0A7J9J313_9ROSI (Helicase ATP-binding domain-containing protein n=1 Tax=Gossypium armourianum TaxID=34283 RepID=A0A7J9J313_9ROSI)

HSP 1 Score: 252 bits (643), Expect = 3.790e-72
Identity = 120/226 (53.10%), Postives = 173/226 (76.55%), Query Frame = 1 
Query: 1435 MLDRRREVESTAQSRQMMAQRQSLPAHLQREDIVETIRDNQVVVLSGETGCGKTTQVPQFVLDDLIDQGEGGKCNIICTQPRRISAVGVADRVASERCEKVGGTVGYQIRLDSRVGPSTRLTFCTTGILLRRLTSDDTLAGVSHIMVDEVHERDLQTDFLLVILRDLLPKRPDLRVVLMSATLQADLFTEYFNGCPSITIPGRTFPVKITYMDDVNRILRGGKTPA 2112
            + D+++  + + + R+M+  RQSLPA+ +++ I+  I  NQVV++SGETGCGKTTQ+PQF+L+  ID   G  C+IICTQPRRISA+ V++RVASER EK+G +VGY++RL+   G  TRL FCTTGILLRRL  D  L GV+H++VDE+HER +  DFLL++L+DLLP+RP+L+++LMSATL A+LF+ YF+G P I IPG T+PV+  +++++  +     TP+
Sbjct:  139 LRDQQQAWQESLEGREMLEFRQSLPAYKEKDTILTAILQNQVVIISGETGCGKTTQIPQFILESKIDSARGAFCSIICTQPRRISAISVSERVASERGEKLGESVGYKVRLEGIKGRDTRLLFCTTGILLRRLLVDRNLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELKLILMSATLDAELFSSYFDGAPLIHIPGFTYPVRTHFLENILEMTGYRLTPS 364
[Close]
BLAST of mRNA_L-elsbetiae_contig5843.14297.1 vs. uniprot
Match: A0A0W8CGQ5_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CGQ5_PHYNI)

HSP 1 Score: 263 bits (671), Expect = 5.570e-72
Identity = 125/221 (56.56%), Postives = 173/221 (78.28%), Query Frame = 1 
Query: 1432 RMLDRRREVESTAQSRQMMAQRQSLPAHLQREDIVETIRDNQVVVLSGETGCGKTTQVPQFVLDDLIDQGEGGKCNIICTQPRRISAVGVADRVASERCEKVGGTVGYQIRLDSRVGPSTRLTFCTTGILLRRLTSDDTLAGVSHIMVDEVHERDLQTDFLLVILRDLLPKRPDLRVVLMSATLQADLFTEYFNG-----CPSITIPGRTFPVKITYMDDV 2079
            ++L  R+  +S    +QM+A R  LPA  +   ++E +++NQVV++ G TGCGKTTQ+PQF+LD+ I++G GG+CNIICTQPRRI+A+GVA RVA ERCE++   VGYQIR+D++   +TRL FCTTG+LLRRL +D  L+GVSH++VDEVHER++ TDFLL ILRDLLP+RPDLRV+LMSAT+ ++LF +YF+      CP + IPG T+PV+  +++DV
Sbjct:   20 KLLQSRKAKDSQQNFQQMLAARAKLPAVKEEAQVIECVQNNQVVLICGATGCGKTTQIPQFILDEHINRGAGGECNIICTQPRRIAAIGVATRVAQERCEEIADVVGYQIRMDAKKSANTRLLFCTTGVLLRRLLNDRQLSGVSHVIVDEVHERNVDTDFLLSILRDLLPQRPDLRVILMSATMNSELFVKYFSSITSTPCPVLDIPGFTYPVECNFLEDV 240
[Close]
BLAST of mRNA_L-elsbetiae_contig5843.14297.1 vs. uniprot
Match: C3Y0X3_BRAFL (Uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Y0X3_BRAFL)

HSP 1 Score: 263 bits (671), Expect = 2.040e-71
Identity = 125/216 (57.87%), Postives = 171/216 (79.17%), Query Frame = 1 
Query: 1429 KRMLDRRREVESTAQSRQMMAQRQSLPAHLQREDIVETIRDNQVVVLSGETGCGKTTQVPQFVLDDLIDQGEGGKCNIICTQPRRISAVGVADRVASERCEKVGGTVGYQIRLDSRVGPSTRLTFCTTGILLRRLTSDDTLAGVSHIMVDEVHERDLQTDFLLVILRDLLPKRPDLRVVLMSATLQADLFTEYFNGCPSITIPGRTFPVKITYMDD 2076
            +++ DR ++ ++T+  R M+ +R+ LPA  ++++I++ + DNQV+V+SG TGCGKTTQVPQF+LDD +   +GG CNIICTQPRRISA  VADRVA+ER E++G  VGYQIRL+S++   TRL FCTTG+LLRRL  D  L G++HI+VDEVHER  ++DFL+++L+DLLPKRPD+RV+LMSATL ADLF+ YF   P I IPG+ FPV   +++D
Sbjct:  271 RKLKDRFKKKQTTSAYRSMLGERKKLPAWNEQDNILKALNDNQVLVVSGMTGCGKTTQVPQFILDDYLGSSKGGLCNIICTQPRRISATAVADRVANERVERLGNVVGYQIRLESKMSTWTRLVFCTTGVLLRRLEGDSLLEGITHIIVDEVHERSEESDFLIMVLKDLLPKRPDIRVILMSATLNADLFSMYFGNSPVIEIPGKIFPVDQYFLED 486
[Close]
BLAST of mRNA_L-elsbetiae_contig5843.14297.1 vs. uniprot
Match: A0A6N2M0D9_SALVM (Helicase ATP-binding domain-containing protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2M0D9_SALVM)

HSP 1 Score: 243 bits (621), Expect = 4.780e-71
Identity = 115/203 (56.65%), Postives = 158/203 (77.83%), Query Frame = 1 
Query: 1471 QSRQMMAQRQSLPAHLQREDIVETIRDNQVVVLSGETGCGKTTQVPQFVLDDLIDQGEGGKCNIICTQPRRISAVGVADRVASERCEKVGGTVGYQIRLDSRVGPSTRLTFCTTGILLRRLTSDDTLAGVSHIMVDEVHERDLQTDFLLVILRDLLPKRPDLRVVLMSATLQADLFTEYFNGCPSITIPGRTFPVKITYMDDV 2079
            + R+MM  R+SLPA  ++E +++ I  NQV+V+SGETGCGKTTQ+PQ++L+  I+ G G  C+IICTQPRRISA+ VADRV++ER E +G  VGY++RL+   G +T L FCT+GILLRRL SD  L G++H+ VDE+HER +  DFLL++L+DLLP+  DLR++LMSATL A+LF+ YF G P+I IPG T+PV   +++DV
Sbjct:    7 EGRKMMDFRKSLPAFKEKERLLQAIAGNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCSIICTQPRRISAMAVADRVSAERGEPLGEAVGYKVRLEGVKGKNTHLLFCTSGILLRRLLSDHNLNGITHVFVDEIHERGMNEDFLLIVLKDLLPRHQDLRLILMSATLNAELFSNYFGGAPTIHIPGFTYPVSAQFLEDV 209
[Close]
BLAST of mRNA_L-elsbetiae_contig5843.14297.1 vs. uniprot
Match: A0A7J9GMQ4_9ROSI (Uncharacterized protein n=3 Tax=Gossypium TaxID=3633 RepID=A0A7J9GMQ4_9ROSI)

HSP 1 Score: 252 bits (643), Expect = 5.140e-71
Identity = 120/226 (53.10%), Postives = 173/226 (76.55%), Query Frame = 1 
Query: 1435 MLDRRREVESTAQSRQMMAQRQSLPAHLQREDIVETIRDNQVVVLSGETGCGKTTQVPQFVLDDLIDQGEGGKCNIICTQPRRISAVGVADRVASERCEKVGGTVGYQIRLDSRVGPSTRLTFCTTGILLRRLTSDDTLAGVSHIMVDEVHERDLQTDFLLVILRDLLPKRPDLRVVLMSATLQADLFTEYFNGCPSITIPGRTFPVKITYMDDVNRILRGGKTPA 2112
            + D+++  + + + R+M+  RQSLPA+ +++ I+  I  NQVV++SGETGCGKTTQ+PQF+L+  ID   G  C+IICTQPRRISA+ V++RVASER EK+G +VGY++RL+   G  TRL FCTTGILLRRL  D  L GV+H++VDE+HER +  DFLL++L+DLLP+RP+L+++LMSATL A+LF+ YF+G P I IPG T+PV+  +++++  +     TP+
Sbjct:   86 LRDQQQAWQESLEGREMLEFRQSLPAYKEKDTILTAILQNQVVIISGETGCGKTTQIPQFILESKIDSARGAFCSIICTQPRRISAISVSERVASERGEKLGESVGYKVRLEGIKGRDTRLLFCTTGILLRRLLVDRNLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELKLILMSATLDAELFSSYFDGAPLIHIPGFTYPVRTHFLENILEMTGYRLTPS 311
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5843.14297.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS22_ECTSI1.300e-29471.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S4JSU1_GUITH2.170e-7560.19Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]
A0A7S3CC51_9CHLO4.340e-7558.53Hypothetical protein (Fragment) n=1 Tax=Chloropico... [more]
W7T633_9STRA9.660e-7541.78Putative atp-dependent rna helicase dhx36 n=2 Tax=... [more]
A0A6A2ZST2_HIBSY7.680e-7453.33Fatty acyl-ACP thioesterases B n=1 Tax=Hibiscus sy... [more]
A0A7J9J313_9ROSI3.790e-7253.10Helicase ATP-binding domain-containing protein n=1... [more]
A0A0W8CGQ5_PHYNI5.570e-7256.56Uncharacterized protein n=1 Tax=Phytophthora nicot... [more]
C3Y0X3_BRAFL2.040e-7157.87Uncharacterized protein (Fragment) n=1 Tax=Branchi... [more]
A0A6N2M0D9_SALVM4.780e-7156.65Helicase ATP-binding domain-containing protein n=1... [more]
A0A7J9GMQ4_9ROSI5.140e-7153.10Uncharacterized protein n=3 Tax=Gossypium TaxID=36... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5843contigL-elsbetiae_contig5843:2585..8727 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score878.6
Seed ortholog evalue2.2e-252
Seed eggNOG ortholog2880.D7FS22
Preferred nameDHX29
KEGG koko:K18995
Hectar predicted targeting categoryother localisation
GOsGO:0002181,GO:0002183,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006139,GO:0006396,GO:0006412,GO:0006413,GO:0006518,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016282,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0042623,GO:0043021,GO:0043024,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0070035,GO:0070993,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
EggNOG free text desc.helicase activity
EggNOG OGsCOG1643@1,KOG0920@2759
EC3.6.4.13
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03012
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-12_006790.1
Exons9
Model size2491
Cds size2490
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816630.105681-CDS-L-elsbetiae_contig5843:2584..35291622816630.105681-CDS-L-elsbetiae_contig5843:2584..3529Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5843 2585..3529 +
1691683697.5729842-CDS-L-elsbetiae_contig5843:2584..35291691683697.5729842-CDS-L-elsbetiae_contig5843:2584..3529Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5843 2585..3529 +
1622816630.117101-CDS-L-elsbetiae_contig5843:4645..47561622816630.117101-CDS-L-elsbetiae_contig5843:4645..4756Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5843 4646..4756 +
1691683697.5851274-CDS-L-elsbetiae_contig5843:4645..47561691683697.5851274-CDS-L-elsbetiae_contig5843:4645..4756Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5843 4646..4756 +
1622816630.128439-CDS-L-elsbetiae_contig5843:5168..55941622816630.128439-CDS-L-elsbetiae_contig5843:5168..5594Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5843 5169..5594 +
1691683697.595619-CDS-L-elsbetiae_contig5843:5168..55941691683697.595619-CDS-L-elsbetiae_contig5843:5168..5594Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5843 5169..5594 +
1622816630.1407654-CDS-L-elsbetiae_contig5843:5927..60021622816630.1407654-CDS-L-elsbetiae_contig5843:5927..6002Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5843 5928..6002 +
1691683697.609203-CDS-L-elsbetiae_contig5843:5927..60021691683697.609203-CDS-L-elsbetiae_contig5843:5927..6002Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5843 5928..6002 +
1622816630.1522298-CDS-L-elsbetiae_contig5843:6348..65151622816630.1522298-CDS-L-elsbetiae_contig5843:6348..6515Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5843 6349..6515 +
1691683697.618883-CDS-L-elsbetiae_contig5843:6348..65151691683697.618883-CDS-L-elsbetiae_contig5843:6348..6515Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5843 6349..6515 +
1622816630.162592-CDS-L-elsbetiae_contig5843:6987..71441622816630.162592-CDS-L-elsbetiae_contig5843:6987..7144Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5843 6988..7144 +
1691683697.6282132-CDS-L-elsbetiae_contig5843:6987..71441691683697.6282132-CDS-L-elsbetiae_contig5843:6987..7144Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5843 6988..7144 +
1622816630.1816382-CDS-L-elsbetiae_contig5843:7385..74901622816630.1816382-CDS-L-elsbetiae_contig5843:7385..7490Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5843 7386..7490 +
1691683697.6374347-CDS-L-elsbetiae_contig5843:7385..74901691683697.6374347-CDS-L-elsbetiae_contig5843:7385..7490Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5843 7386..7490 +
1622816630.1923783-CDS-L-elsbetiae_contig5843:7930..80021622816630.1923783-CDS-L-elsbetiae_contig5843:7930..8002Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5843 7931..8002 +
1691683697.647013-CDS-L-elsbetiae_contig5843:7930..80021691683697.647013-CDS-L-elsbetiae_contig5843:7930..8002Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5843 7931..8002 +
1622816630.2056808-CDS-L-elsbetiae_contig5843:8295..87271622816630.2056808-CDS-L-elsbetiae_contig5843:8295..8727Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5843 8296..8727 +
1691683697.6573465-CDS-L-elsbetiae_contig5843:8295..87271691683697.6573465-CDS-L-elsbetiae_contig5843:8295..8727Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5843 8296..8727 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5843.14297.1prot_L-elsbetiae_contig5843.14297.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5843 2585..8727 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5843.14297.1

>prot_L-elsbetiae_contig5843.14297.1 ID=prot_L-elsbetiae_contig5843.14297.1|Name=mRNA_L-elsbetiae_contig5843.14297.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=830bp
AGGKSRGKNEDEDSGGGARSGPKPVRIKLDKEGRDVILDILHKLHVAGAG
DGAEGDSDGSDEDEEDDEEDEEERQGSSDEDSEDASEPDIEVDDSDGSDD
DGEGFVDRQGHGDFEYDGSFGDMANLMSDLVVNEAALPAAADDGSGDKPA
PSPAGATSAISKDSAEEARLASAGPAKSGSGSRKSSPTTGAKKREDREQV
KNPLLGGGGGGGGGGSSSSASKGAARSNVTREKLLASMVQEDRKTSREAQ
KGVGAVPSAAIHAASTVGGGGVGGAAARGYQRPDPPGAGKGNDKVRLEVC
GENKKTGAPDLNGKKILVFDRKEPILKMLNTCRGKLHIKKKAKGAALLEG
DEVVDWLSDLSWVPNGAVVLISCAGAAGSKAKPSPPKSAAAPEGATTADG
GGSGKHGGGGGVASAEVPAASGEGYQTEQGADEDEEEALALAALGRIRES
YRTRAKERQSAATGRARSDASDQEAGKRMLDRRREVESTAQSRQMMAQRQ
SLPAHLQREDIVETIRDNQVVVLSGETGCGKTTQVPQFVLDDLIDQGEGG
KCNIICTQPRRISAVGVADRVASERCEKVGGTVGYQIRLDSRVGPSTRLT
FCTTGILLRRLTSDDTLAGVSHIMVDEVHERDLQTDFLLVILRDLLPKRP
DLRVVLMSATLQADLFTEYFNGCPSITIPGRTFPVKITYMDDVNRILRGG
KTPAVMPRVSSGAEVVVGRGNGRGNGGAHANANAGGRGAAGRGQAAAAGA
AKGGEGDDDAAPTAYDPLTGEPLELDGDGNANAAAAAAAAVTASVSPKCE
DKVDYDIMVDLVDHIMKTEGNGGPGGGAGR
back to top

mRNA from alignment at L-elsbetiae_contig5843:2585..8727+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5843.14297.1 ID=mRNA_L-elsbetiae_contig5843.14297.1|Name=mRNA_L-elsbetiae_contig5843.14297.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6143bp|location=Sequence derived from alignment at L-elsbetiae_contig5843:2585..8727+ (Laminarionema elsbetiae ELsaHSoW15)
GCGGGGGGCAAATCCAGGGGGAAGAACGAAGACGAGGATAGCGGGGGGGG
GGCACGGAGTGGGCCGAAGCCCGTACGCATCAAGCTGGACAAAGAGGGGC
GAGACGTGATTCTCGACATCCTGCACAAGCTGCACGTTGCCGGTGCGGGG
GACGGGGCCGAGGGCGACTCCGACGGCAGCGACGAAGACGAAGAAGACGA
CGAAGAGGACGAAGAGGAACGACAGGGCAGCAGCGACGAGGACAGCGAAG
ATGCGTCCGAGCCGGATATCGAGGTCGACGACAGCGACGGCAGCGACGAC
GACGGCGAAGGCTTCGTCGATAGGCAAGGCCACGGCGACTTCGAGTACGA
CGGGAGCTTCGGAGACATGGCGAACCTCATGTCCGACTTGGTAGTCAACG
AAGCGGCACTGCCTGCGGCGGCCGACGACGGGAGTGGGGACAAACCGGCA
CCCTCCCCTGCCGGTGCCACATCTGCTATAAGCAAGGACTCGGCCGAGGA
GGCACGCTTGGCGTCGGCAGGCCCCGCGAAAAGCGGCAGCGGTAGCAGGA
AAAGCTCCCCAACGACCGGGGCAAAAAAACGGGAGGACCGGGAACAGGTG
AAGAACCCACTGCTCGGAGGCGGCGGCGGCGGCGGCGGCGGCGGCAGCAG
CAGCAGCGCAAGCAAGGGCGCTGCGCGCAGCAATGTCACGCGAGAGAAAC
TCCTCGCCTCGATGGTCCAGGAAGACCGCAAGACTTCGAGAGAGGCGCAG
AAAGGGGTCGGCGCGGTCCCGTCGGCGGCGATTCACGCGGCGTCTACGGT
TGGGGGCGGGGGCGTGGGTGGGGCAGCGGCCCGCGGGTATCAGCGGCCGG
ACCCACCGGGAGCAGGAAAAGGGAACGATAAGGTTCGCCTGGAAGTGTGT
GGCGAAAACAAGAAGACTGGCGCGCCGGACTTGAACGGAAAGAAGGTGGG
AGGTTCGTTGGTGGGTCTGGTTATCTTTGATGATTTCGCCTGCGATTGTC
AGCTCTCGTCCTTCAGTGCCCGGAAAGCGTGATACGTTGACGTGCAGTTT
TGGTCCTCAACTGTCTGTGCCAGTAAGACACGCGTATCGCGGGGGGTGCT
TCACCCACTCGAACCGAACGATGACGTTTTTTTTTATTATTATTCTGCTT
GTGCTAATGCTGTTTATTTTATTTTTTAGACCACACGATATCTGTTTTGA
AACTACACGATCGGCCTGGTTGCTTTGTCGCCTTTGATTCCAAAGGCGAC
ACCGCTACGTTGTATTGGCGTACAGAGTTCGCTCTTTTCTGCTCTGTTGA
GTTTTCTGTAGGTGTTGGCTCAACAGATAAGAATGATAGATTGAAACCGC
ACGCGACGTACGCAAGAGGGCGGAGGCGGACGCAGTAGCGCGACATGCTG
CGGATTGAATCAGTTCTTGGCTAACCCCCCCCCACTGCTGTACCATCTTG
CACCACCACCGGAGGAGTGATGAGTGTTTGTTTCTTATCTTGTCTGGGGC
TTACAGGTGTCTGTGCGTCTGTTTGTTTGTACTTTCGGTTGCGTCTTGTC
TTGTCCGAGGTTGGTTATCCTTGCCCTCTCTTGTTTTTATACCACACGGG
CGGTAGATTCAGTGGGAAGGTGTTCGCGCTCTCTTGCTTTTATATCATAC
GGGTGGTAGATTCAGTGGGGAGGACTAGATCTGTGGGTCTGACCGGCGAG
AACTCGGCACGGAACTCCCTGGCATTGTTAGGGTGCCAAGATAAAACCAG
GGGGTGTGTACCCCCGGTTGGTGATGTTGGCTTGTCCAGTTTTGTTTTTA
CCTCGCATAACGTGTAGAGGGGAGCGGGGGGCACTATTTGTTTTCGATTT
TGATCGCTTGCTGACCCTTCGGGTCCATTTTATGTTCTTTTTAAGTATAC
GTTAGCATGTGACCACGGGAATTGACCGCATCAAGTGTTGGAATAGTATG
CCCATAAATAGGGAGGTACTGGGTGGAGAGATCGGAACGGTTTTTAATGT
GAAGACACGACAAACCTGGGGTCAGAATGAACATCATCGTCGCGAAACGT
TGTGTGCACAGATACTGGTGTTCGACCGCAAGGAACCTATTCTCAAAATG
CTCAACACGTGCCGTGGGAAGCTGCACATCAAAAAGAAGGCCAAGGGCGC
GGCACTCCTCGAGGGTGACGAGGTGAGTCGCCCAAGTAACAAAATATGCC
CTAGGCTCCGGGCGCGCTTCGCTGAGCGAAGGCTGTGCTGAAATCGAACA
ACACTTTTCGAAAGCCGGAAGCGGGAATCGTCGTACATAAGGCGGTAGAT
GTGTGGTGAATGAATGCCTGCTTGTCCGGAGTGTGGCTGACACCCGTTCC
GAAGGGACTCATGGTATCATCTCGGCAAGATATACCTTGTCCTAGGCTGG
TCCGAGGCCAGTACGCTTGTTCGTGTGGGCGTTGGAACCCAGCACCAACT
CGAACTCCCATCTGCCCGCGGATATTTCAAAGAGTGTTGGACTTTCTCGA
CCCTCGACTCTGCCCACCCCGTTCATTTTTGGACTTTTGGCACCTCTCCG
TCGTGTTGCTATGTACCGATCACACACTTTAAAGGTGGTGGACTGGCTGT
CCGATCTATCCTGGGTTCCTAACGGGGCGGTGGTACTAATCTCTTGCGCG
GGCGCGGCGGGATCAAAAGCGAAGCCCTCCCCGCCGAAATCTGCGGCTGC
TCCCGAAGGGGCCACGACCGCCGACGGAGGCGGCAGCGGCAAGCACGGCG
GCGGCGGCGGCGTTGCTTCGGCCGAGGTCCCCGCGGCTAGTGGAGAGGGC
TACCAAACAGAGCAGGGCGCCGATGAAGACGAGGAAGAGGCCCTGGCTCT
GGCAGCGCTCGGCCGCATCAGGGAGTCGTACAGAACGCGGGCGAAGGAGC
GGCAGTCAGCGGCGACGGGGCGCGCGAGGAGCGACGCATCCGACCAGGAA
GCGGGAAAGCGCATGCTGGACAGGAGACGCGAGGTGGAAAGCACGGCGCA
GTCCCGGCAGGTGAGTTGCTGATAGCTTCGTCCCGCCAGCTCCCTCGCGG
ACTCGGCGGGGTTTCCCGCGGTCGCTAGACATGGCACGCCCTTGATGGGC
TTAGCTCTGCCCAGTGGATACACGAACCCGGCACTTTAGTTTGCCCCATC
AAGGTTTTCGGACAAGGAAGCAATGACCCCGCGGCGTGTGTGTGCCAAGG
ACGCGTGTGCTGTGTGTGCTGGACAGCCTCACTGACTGTCTTGTGCATTT
TAGTTAATAGGTCAAGTGAACTTGAACGGCGTTCCCGATTACCCCTTGTT
CCTCGTGGTGTGTTTATTGTGCTCGTTACTTCGGCGACAACAGATGATGG
CACAGAGGCAGAGCCTGCCGGCCCACCTGCAACGAGAGGACATCGTGGAA
ACTATCCGCGACAACCAGGTGGGGCCACCTGGGCGCGCGAACCACAAAGA
ACGGCGTGACTGTTGATCGGAGCTGTTGTTGTCTTGATCGCGTTACTGCT
TTATATTCACCGCAAATGACTCTGCCATATTTGCGGCAGTATTTATGAGG
CTGTTGGCGCTCGCTCGAGGCGCTTTGCGTTGCTTGTCTTGCTCAGCTCA
GTTTTTAAATTAATGCATAGGTACAAATGTCAGCAGTCTACGTCCAGTCT
GCGAAACAGTTTATGATGATCTCTTACAAATGTGTGTAGGTGCCGCCTGC
TTCCCCCTCCCCACATGGCGTTTTTTTTATTCTGTTCTCTGTGCGCTGTC
GTCGGCGATCGCAGGTGGTCGTTCTGAGCGGCGAGACTGGATGTGGAAAG
ACAACGCAGGTGCCCCAGTTCGTGCTAGACGACCTCATCGACCAGGGCGA
AGGCGGGAAGTGCAACATTATCTGCACGCAGCCGCGCAGGATCAGCGCTG
TCGGAGTCGCCGATAGGGTGGCTTCGGAAAGGTGAGAGAGCCTGCCGGGG
GACAGCGGATAGGTACACAGAGGGTCTCCGCGTTTTTCACATGGCTCTCC
AGCTACCAGCGGAAATCACGGTCCGATGAACGAGCTTTCACTGGTACAAC
AGTATGCATGAAATCGGTGCTTCTCTGTGCATGCAGGGGGCCCTTATCAG
GTATCACATCATGCGTACGTATCATGTGATCGCGCGTTGTTTTTTTGTCC
GTCTTGCGTATGTACGACGTTTTACGTTGGGCCGACCCCTCCGTTGATGG
TGGGTTTCCCTTCCGCCCCTCGATTCCACTTCCGTTGATACTGTCTAGGG
GCGCCCCTCTATGTTCACCATTTGTGATGCATTACCCATGATCTATTCCT
CGTCTCCGGCGTTGTCACTGCTACTGTAGGCAGCCCTTGTCTACCATTTG
TCCCACCCATTATTTCCCGTGTTCTAACGACGACGCTACAACGATATACA
TAGGTGCGAGAAGGTTGGGGGTACGGTGGGGTACCAGATCCGACTTGACT
CCCGGGTAGGGCCATCCACCCGGTTGACTTTCTGCACCACCGGCATCCTA
CTCCGACGGCTGACGTCCGACGACACCCTCGCGGGCGTGTCTCACATTAT
GGTCGACGAGGTACGCGGAGCGGTAGCTCGCTGCTGTCTGTTGCTGTGCT
ACATCCAGCTCGCGGTTGTGGAAGCAACCATGTTGGTGCGGGGGCTACTT
TCGCGGCGAGGCACCGCTGTGACAAGCCGTGTCGATACCTGCGGCGGGTT
TGTGCCGCAGGCTGCTGTACCACCCACTTTTTTTTTCGGCCTATTGGGCG
GGGCTGATGGTGTCCCGTTTGTTCGCAACCGCTACTCTTTGGGATGGCCA
GGTGCACGAGCGGGACCTGCAGACGGACTTCCTGCTGGTGATCCTGAGAG
ACCTTCTACCCAAGAGGCCGGATCTTCGCGTTGTACTCATGAGTGCCACC
TTGCAGGCAAGGATAGCAGCAGTGCATACTCCGCACCACTACGTTTTTTT
TATTGTGTTGGGTGTTGTGGAAAAATCTGCTGTGCTCCGTAAGGGTTTTG
TTTTCAACCCGTCTCGAGGTAGGGCGGGCTCACGCGATGGAATCGTTGCC
CCGACACATTTTCGTTAGTGCTGTTATCTCTCATTCGCCGCACGTCTGGC
GGTGCTAGGCTGAGGCTGAGAGGGCCAAACGCCCTTACACCTGCTGACCG
AAGACGTTGCCGCACGAAAACCTAGGGCACAACAAAGAAGGGAACGCTTC
GTACTTTGTTGTGTGGTTTTGATGTGCCTTGACTAAACCCCTTTCCCCCT
CTCTCGATTTTCTCGCCCCATGATCTGCCCGTTGACGTTGCCTCATTTTC
CTCTTCGGTGGTGCTGTCGGAACTTTGGGGTTCCCTACGGCCACAGGCTG
ATCTGTTCACCGAGTACTTCAACGGCTGCCCGTCGATCACGATTCCCGGC
CGCACTTTCCCGGTTAAGGTGCGAATCACTTCTAGAGAATAACAAGAAAA
AGAAGGAGAAGCGTGGGGTCATTGCGGAAGCGAATGCTTCGGCTTTTGAG
TGTCAATACGGCTAGCAGCGTACGCCGACGGTTCGTTTATGGTCATATTT
TCCCTTTTGCTTTTGATTTCCAATACGCGCAGGGTTGTGTATAGTCCAGG
CCTGGTAATCAGCGTGCACGAGTTTTTTCAGCCAGCCGTTTGTTCGCCGA
GGATACTTTTCAGGTACATAAAAACTGCGCAGTTTTGGCGCTCTTGTTGC
AACCTCTCCAGATAACCTACATGGATGACGTCAATCGGATACTGCGGGGT
GGGAAAACGCCGGCAGTTATGCCCCGGGTTTCGTCGGGAGCGGAAGTAGT
CGTTGGCCGAGGCAACGGCCGGGGAAACGGTGGGGCACACGCGAACGCAA
ACGCCGGCGGCAGGGGGGCGGCCGGCCGAGGGCAGGCGGCTGCAGCAGGG
GCGGCGAAGGGCGGAGAGGGAGACGACGACGCAGCACCGACGGCGTACGA
TCCGCTCACGGGCGAGCCGCTGGAGTTGGACGGAGACGGCAACGCAAACG
CCGCCGCCGCCGCCGCCGCCGCGGTTACCGCGTCAGTGTCTCCGAAGTGC
GAGGACAAGGTCGACTACGACATTATGGTGGACCTGGTCGACCACATAAT
GAAGACCGAGGGTAACGGAGGGCCGGGGGGCGGCGCCGGCAGG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig5843:2585..8727+

>mRNA_L-elsbetiae_contig5843.14297.1 ID=mRNA_L-elsbetiae_contig5843.14297.1|Name=mRNA_L-elsbetiae_contig5843.14297.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4980bp|location=Sequence derived from alignment at L-elsbetiae_contig5843:2585..8727+ (Laminarionema elsbetiae ELsaHSoW15)
GCGGGGGGCAAATCCAGGGGGAAGAACGAAGACGAGGATAGCGGGGGGGG
GGCACGGAGTGGGCCGAAGCCCGTACGCATCAAGCTGGACAAAGAGGGGC
GAGACGTGATTCTCGACATCCTGCACAAGCTGCACGTTGCCGGTGCGGGG
GACGGGGCCGAGGGCGACTCCGACGGCAGCGACGAAGACGAAGAAGACGA
CGAAGAGGACGAAGAGGAACGACAGGGCAGCAGCGACGAGGACAGCGAAG
ATGCGTCCGAGCCGGATATCGAGGTCGACGACAGCGACGGCAGCGACGAC
GACGGCGAAGGCTTCGTCGATAGGCAAGGCCACGGCGACTTCGAGTACGA
CGGGAGCTTCGGAGACATGGCGAACCTCATGTCCGACTTGGTAGTCAACG
AAGCGGCACTGCCTGCGGCGGCCGACGACGGGAGTGGGGACAAACCGGCA
CCCTCCCCTGCCGGTGCCACATCTGCTATAAGCAAGGACTCGGCCGAGGA
GGCACGCTTGGCGTCGGCAGGCCCCGCGAAAAGCGGCAGCGGTAGCAGGA
AAAGCTCCCCAACGACCGGGGCAAAAAAACGGGAGGACCGGGAACAGGTG
AAGAACCCACTGCTCGGAGGCGGCGGCGGCGGCGGCGGCGGCGGCAGCAG
CAGCAGCGCAAGCAAGGGCGCTGCGCGCAGCAATGTCACGCGAGAGAAAC
TCCTCGCCTCGATGGTCCAGGAAGACCGCAAGACTTCGAGAGAGGCGCAG
AAAGGGGTCGGCGCGGTCCCGTCGGCGGCGATTCACGCGGCGTCTACGGT
TGGGGGCGGGGGCGTGGGTGGGGCAGCGGCCCGCGGGTATCAGCGGCCGG
ACCCACCGGGAGCAGGAAAAGGGAACGATAAGGTTCGCCTGGAAGTGTGT
GGCGAAAACAAGAAGACTGGCGCGCCGGACTTGAACGGAAAGAAGGCGGG
GGGCAAATCCAGGGGGAAGAACGAAGACGAGGATAGCGGGGGGGGGGCAC
GGAGTGGGCCGAAGCCCGTACGCATCAAGCTGGACAAAGAGGGGCGAGAC
GTGATTCTCGACATCCTGCACAAGCTGCACGTTGCCGGTGCGGGGGACGG
GGCCGAGGGCGACTCCGACGGCAGCGACGAAGACGAAGAAGACGACGAAG
AGGACGAAGAGGAACGACAGGGCAGCAGCGACGAGGACAGCGAAGATGCG
TCCGAGCCGGATATCGAGGTCGACGACAGCGACGGCAGCGACGACGACGG
CGAAGGCTTCGTCGATAGGCAAGGCCACGGCGACTTCGAGTACGACGGGA
GCTTCGGAGACATGGCGAACCTCATGTCCGACTTGGTAGTCAACGAAGCG
GCACTGCCTGCGGCGGCCGACGACGGGAGTGGGGACAAACCGGCACCCTC
CCCTGCCGGTGCCACATCTGCTATAAGCAAGGACTCGGCCGAGGAGGCAC
GCTTGGCGTCGGCAGGCCCCGCGAAAAGCGGCAGCGGTAGCAGGAAAAGC
TCCCCAACGACCGGGGCAAAAAAACGGGAGGACCGGGAACAGGTGAAGAA
CCCACTGCTCGGAGGCGGCGGCGGCGGCGGCGGCGGCGGCAGCAGCAGCA
GCGCAAGCAAGGGCGCTGCGCGCAGCAATGTCACGCGAGAGAAACTCCTC
GCCTCGATGGTCCAGGAAGACCGCAAGACTTCGAGAGAGGCGCAGAAAGG
GGTCGGCGCGGTCCCGTCGGCGGCGATTCACGCGGCGTCTACGGTTGGGG
GCGGGGGCGTGGGTGGGGCAGCGGCCCGCGGGTATCAGCGGCCGGACCCA
CCGGGAGCAGGAAAAGGGAACGATAAGGTTCGCCTGGAAGTGTGTGGCGA
AAACAAGAAGACTGGCGCGCCGGACTTGAACGGAAAGAAGATACTGGTGT
TCGACCGCAAGGAACCTATTCTCAAAATGCTCAACACGTGCCGTGGGAAG
CTGCACATCAAAAAGAAGGCCAAGGGCGCGGCACTCCTCGAGGGTGACGA
GATACTGGTGTTCGACCGCAAGGAACCTATTCTCAAAATGCTCAACACGT
GCCGTGGGAAGCTGCACATCAAAAAGAAGGCCAAGGGCGCGGCACTCCTC
GAGGGTGACGAGGTGGTGGACTGGCTGTCCGATCTATCCTGGGTTCCTAA
CGGGGCGGTGGTACTAATCTCTTGCGCGGGCGCGGCGGGATCAAAAGCGA
AGCCCTCCCCGCCGAAATCTGCGGCTGCTCCCGAAGGGGCCACGACCGCC
GACGGAGGCGGCAGCGGCAAGCACGGCGGCGGCGGCGGCGTTGCTTCGGC
CGAGGTCCCCGCGGCTAGTGGAGAGGGCTACCAAACAGAGCAGGGCGCCG
ATGAAGACGAGGAAGAGGCCCTGGCTCTGGCAGCGCTCGGCCGCATCAGG
GAGTCGTACAGAACGCGGGCGAAGGAGCGGCAGTCAGCGGCGACGGGGCG
CGCGAGGAGCGACGCATCCGACCAGGAAGCGGGAAAGCGCATGCTGGACA
GGAGACGCGAGGTGGAAAGCACGGCGCAGTCCCGGCAGGTGGTGGACTGG
CTGTCCGATCTATCCTGGGTTCCTAACGGGGCGGTGGTACTAATCTCTTG
CGCGGGCGCGGCGGGATCAAAAGCGAAGCCCTCCCCGCCGAAATCTGCGG
CTGCTCCCGAAGGGGCCACGACCGCCGACGGAGGCGGCAGCGGCAAGCAC
GGCGGCGGCGGCGGCGTTGCTTCGGCCGAGGTCCCCGCGGCTAGTGGAGA
GGGCTACCAAACAGAGCAGGGCGCCGATGAAGACGAGGAAGAGGCCCTGG
CTCTGGCAGCGCTCGGCCGCATCAGGGAGTCGTACAGAACGCGGGCGAAG
GAGCGGCAGTCAGCGGCGACGGGGCGCGCGAGGAGCGACGCATCCGACCA
GGAAGCGGGAAAGCGCATGCTGGACAGGAGACGCGAGGTGGAAAGCACGG
CGCAGTCCCGGCAGATGATGGCACAGAGGCAGAGCCTGCCGGCCCACCTG
CAACGAGAGGACATCGTGGAAACTATCCGCGACAACCAGATGATGGCACA
GAGGCAGAGCCTGCCGGCCCACCTGCAACGAGAGGACATCGTGGAAACTA
TCCGCGACAACCAGGTGGTCGTTCTGAGCGGCGAGACTGGATGTGGAAAG
ACAACGCAGGTGCCCCAGTTCGTGCTAGACGACCTCATCGACCAGGGCGA
AGGCGGGAAGTGCAACATTATCTGCACGCAGCCGCGCAGGATCAGCGCTG
TCGGAGTCGCCGATAGGGTGGCTTCGGAAAGGTGGTCGTTCTGAGCGGCG
AGACTGGATGTGGAAAGACAACGCAGGTGCCCCAGTTCGTGCTAGACGAC
CTCATCGACCAGGGCGAAGGCGGGAAGTGCAACATTATCTGCACGCAGCC
GCGCAGGATCAGCGCTGTCGGAGTCGCCGATAGGGTGGCTTCGGAAAGGT
GCGAGAAGGTTGGGGGTACGGTGGGGTACCAGATCCGACTTGACTCCCGG
GTAGGGCCATCCACCCGGTTGACTTTCTGCACCACCGGCATCCTACTCCG
ACGGCTGACGTCCGACGACACCCTCGCGGGCGTGTCTCACATTATGGTCG
ACGAGGTGCGAGAAGGTTGGGGGTACGGTGGGGTACCAGATCCGACTTGA
CTCCCGGGTAGGGCCATCCACCCGGTTGACTTTCTGCACCACCGGCATCC
TACTCCGACGGCTGACGTCCGACGACACCCTCGCGGGCGTGTCTCACATT
ATGGTCGACGAGGTGCACGAGCGGGACCTGCAGACGGACTTCCTGCTGGT
GATCCTGAGAGACCTTCTACCCAAGAGGCCGGATCTTCGCGTTGTACTCA
TGAGTGCCACCTTGCAGGTGCACGAGCGGGACCTGCAGACGGACTTCCTG
CTGGTGATCCTGAGAGACCTTCTACCCAAGAGGCCGGATCTTCGCGTTGT
ACTCATGAGTGCCACCTTGCAGGCTGATCTGTTCACCGAGTACTTCAACG
GCTGCCCGTCGATCACGATTCCCGGCCGCACTTTCCCGGTTAAGGCTGAT
CTGTTCACCGAGTACTTCAACGGCTGCCCGTCGATCACGATTCCCGGCCG
CACTTTCCCGGTTAAGATAACCTACATGGATGACGTCAATCGGATACTGC
GGGGTGGGAAAACGCCGGCAGTTATGCCCCGGGTTTCGTCGGGAGCGGAA
GTAGTCGTTGGCCGAGGCAACGGCCGGGGAAACGGTGGGGCACACGCGAA
CGCAAACGCCGGCGGCAGGGGGGCGGCCGGCCGAGGGCAGGCGGCTGCAG
CAGGGGCGGCGAAGGGCGGAGAGGGAGACGACGACGCAGCACCGACGGCG
TACGATCCGCTCACGGGCGAGCCGCTGGAGTTGGACGGAGACGGCAACGC
AAACGCCGCCGCCGCCGCCGCCGCCGCGGTTACCGCGTCAGTGTCTCCGA
AGTGCGAGGACAAGGTCGACTACGACATTATGGTGGACCTGGTCGACCAC
ATAATGAAGACCGAGGGTAACGGAGGGCCGGGGGGCGGCGCCGGCAGGAT
AACCTACATGGATGACGTCAATCGGATACTGCGGGGTGGGAAAACGCCGG
CAGTTATGCCCCGGGTTTCGTCGGGAGCGGAAGTAGTCGTTGGCCGAGGC
AACGGCCGGGGAAACGGTGGGGCACACGCGAACGCAAACGCCGGCGGCAG
GGGGGCGGCCGGCCGAGGGCAGGCGGCTGCAGCAGGGGCGGCGAAGGGCG
GAGAGGGAGACGACGACGCAGCACCGACGGCGTACGATCCGCTCACGGGC
GAGCCGCTGGAGTTGGACGGAGACGGCAACGCAAACGCCGCCGCCGCCGC
CGCCGCCGCGGTTACCGCGTCAGTGTCTCCGAAGTGCGAGGACAAGGTCG
ACTACGACATTATGGTGGACCTGGTCGACCACATAATGAAGACCGAGGGT
AACGGAGGGCCGGGGGGCGGCGCCGGCAGG
back to top