mRNA_L-elsbetiae_contig5708.14091.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5708.14091.1
Unique NamemRNA_L-elsbetiae_contig5708.14091.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5708.14091.1 vs. uniprot
Match: A0A6H5KFX0_9PHAE (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFX0_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 3.300e-40
Identity = 64/84 (76.19%), Postives = 74/84 (88.10%), Query Frame = 1
Query:   13 RSSVYVDGVVVGAVCCRTEPPESAEGHEALYIMTLGVLAAWRRRNIGTRLLRRVLDNLPRYPSVGELYLHVQTNNEEAIGFYKV 264
            R +VYVD V VGAVCCR EP +S  GH++LYIMTLGVLA WRRRNIGT LLRRVL++LPR+PSV E+YLHVQTNN+EA+GFYKV
Sbjct:   30 RCAVYVDNVAVGAVCCRIEPSKSPGGHDSLYIMTLGVLATWRRRNIGTHLLRRVLESLPRHPSVKEVYLHVQTNNDEAVGFYKV 113          
BLAST of mRNA_L-elsbetiae_contig5708.14091.1 vs. uniprot
Match: D8LRT1_ECTSI (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRT1_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 5.990e-40
Identity = 64/81 (79.01%), Postives = 73/81 (90.12%), Query Frame = 1
Query:   22 VYVDGVVVGAVCCRTEPPESAEGHEALYIMTLGVLAAWRRRNIGTRLLRRVLDNLPRYPSVGELYLHVQTNNEEAIGFYKV 264
            VYVD V VGAVCCR EPP+S  GH++LYIMTLGVLA WRRRNIGT LLRRVL++LPR+PSV E+YLHVQTNN+EA+GFYKV
Sbjct:   88 VYVDNVAVGAVCCRIEPPKSPGGHDSLYIMTLGVLATWRRRNIGTHLLRRVLESLPRHPSVKEVYLHVQTNNDEAVGFYKV 168          
BLAST of mRNA_L-elsbetiae_contig5708.14091.1 vs. uniprot
Match: A0A7S1TXC2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TXC2_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 3.200e-19
Identity = 43/76 (56.58%), Postives = 56/76 (73.68%), Query Frame = 1
Query:   40 VVGAVCCRTEPPESAEGH---EALYIMTLGVLAAWRRRNIGTRLLRRVLDNLPRYPSVGELYLHVQTNNEEAIGFY 258
            VVGA+CCR E   S +G    + LYIMTLGVLAAWR R+IG+RLL +VL+N  +  ++  +YLHVQTNN+ A+ FY
Sbjct:   70 VVGAICCRREDNTSEDGAARPKKLYIMTLGVLAAWRGRSIGSRLLEKVLENAEQDETLDHIYLHVQTNNDAAMSFY 145          
BLAST of mRNA_L-elsbetiae_contig5708.14091.1 vs. uniprot
Match: A0A7S2CI27_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CI27_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 6.770e-19
Identity = 43/78 (55.13%), Postives = 56/78 (71.79%), Query Frame = 1
Query:   25 YVDGVVVGAVCCRTEPPESAEGHEALYIMTLGVLAAWRRRNIGTRLLRRVLDNLPRYPSVGELYLHVQTNNEEAIGFY 258
            Y +G VVG++C R EP  +  G + LYIMTLGVLAA+RRR+IG +LL R L+ L   P + E+YLHVQ +N+ AI FY
Sbjct:   63 YWNGFVVGSICSRLEP-STGPGPKKLYIMTLGVLAAYRRRSIGKKLLMRTLEALESRPDITEIYLHVQVSNDTAIQFY 139          
BLAST of mRNA_L-elsbetiae_contig5708.14091.1 vs. uniprot
Match: UPI00103624B9 (N-alpha-acetyltransferase 50 n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI00103624B9)

HSP 1 Score: 82.4 bits (202), Expect = 2.680e-18
Identity = 45/79 (56.96%), Postives = 54/79 (68.35%), Query Frame = 1
Query:   25 YVDGVVVGAVCCRTEPPESAEGHEALYIMTLGVLAAWRRRNIGTRLLRRVLDNLPRYPSVGELYLHVQTNNEEAIGFYK 261
            Y   + VGA+ CR E  ES  G   +YIMTLGVLA +R   IGT+LL  VLD L    ++GE+YLHVQTNNE+AI FYK
Sbjct:   19 YYSDICVGAIACRLEKKES--GAVRVYIMTLGVLAPYRGLGIGTKLLNHVLD-LCSKQNIGEIYLHVQTNNEDAISFYK 94          
BLAST of mRNA_L-elsbetiae_contig5708.14091.1 vs. uniprot
Match: A0A388M8Q6_CHABU (N-acetyltransferase domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388M8Q6_CHABU)

HSP 1 Score: 82.0 bits (201), Expect = 4.320e-18
Identity = 44/87 (50.57%), Postives = 56/87 (64.37%), Query Frame = 1
Query:    1 VVRARSSVYVDGVVVGAVCCRTEPPESAEGHEALYIMTLGVLAAWRRRNIGTRLLRRVLDNLPRYPSVGELYLHVQTNNEEAIGFYK 261
            VV    + Y   + VGA+ CR E  +   G   LYIMTLGVLA +RR  IG++LL+  LD   + P + E+YLHVQTNN+EAI FYK
Sbjct:    6 VVGILGNTYYGDICVGAIACRQEKRDG--GGVKLYIMTLGVLAPYRRLGIGSKLLQHCLDICRQDPGIWEIYLHVQTNNDEAIAFYK 90          
BLAST of mRNA_L-elsbetiae_contig5708.14091.1 vs. uniprot
Match: A0A5N6LIM2_9ASTR (N-acetyltransferase domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LIM2_9ASTR)

HSP 1 Score: 81.3 bits (199), Expect = 6.370e-18
Identity = 42/81 (51.85%), Postives = 53/81 (65.43%), Query Frame = 1
Query:   19 SVYVDGVVVGAVCCRTEPPESAEGHEALYIMTLGVLAAWRRRNIGTRLLRRVLDNLPRYPSVGELYLHVQTNNEEAIGFYK 261
            S Y   + VG++ CR E  E   G   +YIMTLGVLA +R   IGT+LL  VLD   +  ++ E+YLHVQTNNE+AI FYK
Sbjct:    7 SAYYSDICVGSIACRLEKKEG--GAVRVYIMTLGVLAPYRGLGIGTKLLDHVLDLSSKQTNISEIYLHVQTNNEDAISFYK 85          
BLAST of mRNA_L-elsbetiae_contig5708.14091.1 vs. uniprot
Match: A0A7S2USK3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USK3_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 6.620e-18
Identity = 43/79 (54.43%), Postives = 55/79 (69.62%), Query Frame = 1
Query:   25 YVDGVVVGAVCCRTEPPESAEGHEALYIMTLGVLAAWRRRNIGTRLLRRVLDNLPRYPSVGELYLHVQTNNEEAIGFYK 261
            Y +G VVGAVC R E   S+ G   +YIMTLGVLAA+R R+IG++LL RVL     Y  +  +YLHVQT+N EA+ FY+
Sbjct:   54 YWNGFVVGAVCSRFEA--SSNGRRNVYIMTLGVLAAYRGRSIGSQLLERVLSACEAYDDLDHIYLHVQTSNTEALNFYR 130          
BLAST of mRNA_L-elsbetiae_contig5708.14091.1 vs. uniprot
Match: A0A1Y2GBC3_9FUNG (Acyl-CoA N-acyltransferase n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GBC3_9FUNG)

HSP 1 Score: 82.0 bits (201), Expect = 1.260e-17
Identity = 41/84 (48.81%), Postives = 57/84 (67.86%), Query Frame = 1
Query:   22 VYVDGVVVGAVCCRTEPPESAEGHEALYIMTLGVLAAWRRRNIGTRLLRRVLDN--LPRY--PSVGELYLHVQTNNEEAIGFYK 261
            +Y + + VG VCCR E    +   + LYI TLGVLA +RR  +G++LL+ +L+N  LP    P + ++YLHVQTNNEEA+ FYK
Sbjct:   62 IYFNDICVGGVCCRKENVPGSTSLQNLYIATLGVLAPYRRLGLGSKLLKHILENAKLPSSSGPKIAKVYLHVQTNNEEAVEFYK 145          
BLAST of mRNA_L-elsbetiae_contig5708.14091.1 vs. uniprot
Match: A0A2J6KC85_LACSA (N-acetyltransferase domain-containing protein n=4 Tax=Asteraceae TaxID=4210 RepID=A0A2J6KC85_LACSA)

HSP 1 Score: 81.6 bits (200), Expect = 1.300e-17
Identity = 43/79 (54.43%), Postives = 56/79 (70.89%), Query Frame = 1
Query:   25 YVDGVVVGAVCCRTEPPESAEGHEALYIMTLGVLAAWRRRNIGTRLLRRVLDNLPRYPSVGELYLHVQTNNEEAIGFYK 261
            Y + + VG++ CR E  ES  G   +YIMTLGVLA +R   IGT+LL  VL+ L +  ++GE+YLHVQTNNE+AI FYK
Sbjct:   53 YYNDICVGSIACRLEKKES--GAVRVYIMTLGVLAPYRGLGIGTKLLNHVLE-LSQKQNIGEIYLHVQTNNEDAISFYK 128          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5708.14091.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFX0_9PHAE3.300e-4076.19N-acetyltransferase domain-containing protein n=1 ... [more]
D8LRT1_ECTSI5.990e-4079.01N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7S1TXC2_9STRA3.200e-1956.58Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2CI27_9STRA6.770e-1955.13Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
UPI00103624B92.680e-1856.96N-alpha-acetyltransferase 50 n=1 Tax=Camellia sine... [more]
A0A388M8Q6_CHABU4.320e-1850.57N-acetyltransferase domain-containing protein n=1 ... [more]
A0A5N6LIM2_9ASTR6.370e-1851.85N-acetyltransferase domain-containing protein n=2 ... [more]
A0A7S2USK3_9STRA6.620e-1854.43Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1Y2GBC3_9FUNG1.260e-1748.81Acyl-CoA N-acyltransferase n=1 Tax=Lobosporangium ... [more]
A0A2J6KC85_LACSA1.300e-1754.43N-acetyltransferase domain-containing protein n=4 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5708contigL-elsbetiae_contig5708:4199..4465 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score140.2
Seed ortholog evalue4.7e-31
Seed eggNOG ortholog2880.D8LRT1
KEGG koko:K20793
Hectar predicted targeting categoryother localisation
GOsGO:0000070,GO:0000278,GO:0000280,GO:0000819,GO:0003674,GO:0003824,GO:0004402,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006325,GO:0006464,GO:0006473,GO:0006474,GO:0006475,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0007064,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0010485,GO:0016043,GO:0016407,GO:0016410,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019538,GO:0022402,GO:0031365,GO:0034085,GO:0034087,GO:0034212,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043543,GO:0043967,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0048285,GO:0051276,GO:0051604,GO:0052858,GO:0061733,GO:0070601,GO:0071704,GO:0071840,GO:0071962,GO:0098813,GO:0140014,GO:1901564,GO:1903047
EggNOG free text desc.peptide alpha-N-acetyltransferase activity
EggNOG OGsCOG0456@1,KOG3138@2759
EC2.3.1.258
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Ec32 ortholog descriptionAcetyltransferase (GNAT) domain protein
Ec32 orthologEc-08_002320.1
Exons1
Model size267
Cds size267
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816609.655331-CDS-L-elsbetiae_contig5708:4198..44651622816609.655331-CDS-L-elsbetiae_contig5708:4198..4465Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5708 4199..4465 +
1691683682.6216273-CDS-L-elsbetiae_contig5708:4198..44651691683682.6216273-CDS-L-elsbetiae_contig5708:4198..4465Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5708 4199..4465 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5708.14091.1prot_L-elsbetiae_contig5708.14091.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5708 4199..4465 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5708.14091.1

>prot_L-elsbetiae_contig5708.14091.1 ID=prot_L-elsbetiae_contig5708.14091.1|Name=mRNA_L-elsbetiae_contig5708.14091.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=89bp
VVRARSSVYVDGVVVGAVCCRTEPPESAEGHEALYIMTLGVLAAWRRRNI
GTRLLRRVLDNLPRYPSVGELYLHVQTNNEEAIGFYKV*
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mRNA from alignment at L-elsbetiae_contig5708:4199..4465+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5708.14091.1 ID=mRNA_L-elsbetiae_contig5708.14091.1|Name=mRNA_L-elsbetiae_contig5708.14091.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=267bp|location=Sequence derived from alignment at L-elsbetiae_contig5708:4199..4465+ (Laminarionema elsbetiae ELsaHSoW15)
GTCGTCCGCGCTCGTTCGTCAGTATACGTTGACGGCGTGGTCGTTGGGGC GGTGTGCTGCCGAACCGAGCCCCCAGAGTCTGCGGAGGGACACGAAGCAC TATACATCATGACCCTGGGCGTACTTGCGGCGTGGAGACGGCGTAACATT GGCACCCGGCTTCTACGGAGAGTGCTTGACAACCTTCCACGATACCCATC GGTCGGAGAATTGTATTTACATGTGCAGACGAACAACGAAGAAGCGATTG GATTCTACAAGGTGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5708:4199..4465+

>mRNA_L-elsbetiae_contig5708.14091.1 ID=mRNA_L-elsbetiae_contig5708.14091.1|Name=mRNA_L-elsbetiae_contig5708.14091.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=534bp|location=Sequence derived from alignment at L-elsbetiae_contig5708:4199..4465+ (Laminarionema elsbetiae ELsaHSoW15)
GTCGTCCGCGCTCGTTCGTCAGTATACGTTGACGGCGTGGTCGTTGGGGC
GGTGTGCTGCCGAACCGAGCCCCCAGAGTCTGCGGAGGGACACGAAGCAC
TATACATCATGACCCTGGGCGTACTTGCGGCGTGGAGACGGCGTAACATT
GGCACCCGGCTTCTACGGAGAGTGCTTGACAACCTTCCACGATACCCATC
GGTCGGAGAATTGTATTTACATGTGCAGACGAACAACGAAGAAGCGATTG
GATTCTACAAGGTGTGAGTCGTCCGCGCTCGTTCGTCAGTATACGTTGAC
GGCGTGGTCGTTGGGGCGGTGTGCTGCCGAACCGAGCCCCCAGAGTCTGC
GGAGGGACACGAAGCACTATACATCATGACCCTGGGCGTACTTGCGGCGT
GGAGACGGCGTAACATTGGCACCCGGCTTCTACGGAGAGTGCTTGACAAC
CTTCCACGATACCCATCGGTCGGAGAATTGTATTTACATGTGCAGACGAA
CAACGAAGAAGCGATTGGATTCTACAAGGTGTGA
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