prot_L-elsbetiae_contig565.13992.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig565.13992.1
Unique Nameprot_L-elsbetiae_contig565.13992.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length119
Homology
BLAST of mRNA_L-elsbetiae_contig565.13992.1 vs. uniprot
Match: D7FSY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSY0_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 4.900e-49
Identity = 78/95 (82.11%), Postives = 85/95 (89.47%), Query Frame = 0
Query:   25 MSFGSMTAAKADYELPSPPSDGVSDLTFSPNGSLIAAGSWDNGVRVWEMQRGYGNQGVTAVPKAQINHDAPVLCTDFSSDGTKVFSGGASKQARL 119
            MSFG+M A KADY LPS PSDGVSD+TFSP G+LI AGSWDNGVRVWE+QRGYG Q +TAVPKAQINHDAPVLCTDFS+DGTKVFSGGASKQ  +
Sbjct:    1 MSFGAMNAGKADYALPSAPSDGVSDITFSPTGNLITAGSWDNGVRVWELQRGYGTQPITAVPKAQINHDAPVLCTDFSADGTKVFSGGASKQVNM 95          
BLAST of mRNA_L-elsbetiae_contig565.13992.1 vs. uniprot
Match: A0A5D6XL84_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL84_9STRA)

HSP 1 Score: 100 bits (249), Expect = 5.160e-23
Identity = 50/99 (50.51%), Postives = 65/99 (65.66%), Query Frame = 0
Query:   23 PKMSFGSMTAAKADYELPSPPSDGVSDLTFSPNGSLIAAGSWDNGVRVWEMQRGYGNQGV--TAVPKAQINHDAPVLCTDFSSDGTKVFSGGASKQARL 119
            P  + G       DY +P+P SDG++DL +SP  +++ AGSWDN VR WE+Q+    QG    AVPKAQI HD PVLCT FS+DG+ VFSG   K A++
Sbjct:    7 PAAATGGYPNPNNDYTVPTPISDGIADLAWSPTANVLVAGSWDNYVRCWEVQQ----QGAQFNAVPKAQIAHDGPVLCTAFSADGSAVFSGSCDKTAKM 101          
BLAST of mRNA_L-elsbetiae_contig565.13992.1 vs. uniprot
Match: K3XAP5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAP5_GLOUD)

HSP 1 Score: 100 bits (249), Expect = 6.500e-23
Identity = 48/84 (57.14%), Postives = 61/84 (72.62%), Query Frame = 0
Query:   36 DYELPSPPSDGVSDLTFSPNGSLIAAGSWDNGVRVWEMQRGYGNQGVTAVPKAQINHDAPVLCTDFSSDGTKVFSGGASKQARL 119
            DY +P+P +DGV DL +SP  +++ AGSWDN VR WE+Q+  G Q   AVPKAQI+HD PVLCT FS DG+ VFSG   K A++
Sbjct:   22 DYTIPTPINDGVQDLAWSPTSNVLVAGSWDNFVRCWEVQQ-QGTQ-FNAVPKAQISHDGPVLCTAFSGDGSTVFSGSCDKTAKM 103          
BLAST of mRNA_L-elsbetiae_contig565.13992.1 vs. uniprot
Match: A0A7C8YWT5_OPUST (Uncharacterized protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8YWT5_OPUST)

HSP 1 Score: 95.1 bits (235), Expect = 1.120e-22
Identity = 44/83 (53.01%), Postives = 56/83 (67.47%), Query Frame = 0
Query:   37 YELPSPPSDGVSDLTFSPNGSLIAAGSWDNGVRVWEMQRGYGNQGVTAVPKAQINHDAPVLCTDFSSDGTKVFSGGASKQARL 119
            YE+P PPSD VS L+FSP  + I A SWDN VR W++   +    V+A PKA I+HD PVLC+ +  DGT VFSGG  KQ ++
Sbjct:   17 YEVPQPPSDSVSSLSFSPKANHIVATSWDNQVRCWDVM--HSGTNVSATPKAFISHDQPVLCSTWKDDGTTVFSGGCDKQVKM 97          
BLAST of mRNA_L-elsbetiae_contig565.13992.1 vs. uniprot
Match: A0A2D4CJX3_PYTIN (WD domain-containing protein, putative (Fragment) n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CJX3_PYTIN)

HSP 1 Score: 98.2 bits (243), Expect = 3.880e-22
Identity = 46/85 (54.12%), Postives = 63/85 (74.12%), Query Frame = 0
Query:   35 ADYELPSPPSDGVSDLTFSPNGSLIAAGSWDNGVRVWEMQRGYGNQGVTAVPKAQINHDAPVLCTDFSSDGTKVFSGGASKQARL 119
            +DY++P   +DG+ DL++SP+ +++ AGSWDN VR WE+Q+  G Q   AVPKAQI+H APVLCT FS DG+ VFSG   K A++
Sbjct:    7 SDYDVPPAVNDGIQDLSWSPSSNILVAGSWDNLVRCWEVQQS-GTQ-FNAVPKAQISHSAPVLCTAFSGDGSSVFSGSCDKTAKM 89          
BLAST of mRNA_L-elsbetiae_contig565.13992.1 vs. uniprot
Match: A0A0L0HKY2_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HKY2_SPIPD)

HSP 1 Score: 98.2 bits (243), Expect = 4.650e-22
Identity = 51/99 (51.52%), Postives = 63/99 (63.64%), Query Frame = 0
Query:   25 MSFGSMTAAKA----DYELPSPPSDGVSDLTFSPNGSLIAAGSWDNGVRVWEMQRGYGNQGVTAVPKAQINHDAPVLCTDFSSDGTKVFSGGASKQARL 119
            MSFG  +   A    D ELP PPSD VS+L+FSP  + IAA +WDN  R+WE+    G  G  ++PKA I H+AP LC D+S DGTKV SGG  K  R+
Sbjct:    1 MSFGLGSTVAATQNKDVELPQPPSDSVSELSFSPKANYIAASAWDNQTRIWEI----GPNG-QSIPKAAIQHEAPALCVDWSLDGTKVLSGGCDKAGRM 94          
BLAST of mRNA_L-elsbetiae_contig565.13992.1 vs. uniprot
Match: A0A7C9D3M1_OPUST (Uncharacterized protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9D3M1_OPUST)

HSP 1 Score: 95.1 bits (235), Expect = 6.680e-21
Identity = 44/83 (53.01%), Postives = 56/83 (67.47%), Query Frame = 0
Query:   37 YELPSPPSDGVSDLTFSPNGSLIAAGSWDNGVRVWEMQRGYGNQGVTAVPKAQINHDAPVLCTDFSSDGTKVFSGGASKQARL 119
            YE+P PPSD VS L+FSP  + I A SWDN VR W++   +    V+A PKA I+HD PVLC+ +  DGT VFSGG  KQ ++
Sbjct:   17 YEVPQPPSDSVSSLSFSPKANHIVATSWDNQVRCWDVM--HSGTNVSATPKAFISHDQPVLCSTWKDDGTTVFSGGCDKQVKM 97          
BLAST of mRNA_L-elsbetiae_contig565.13992.1 vs. uniprot
Match: A0A507E5L0_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E5L0_9FUNG)

HSP 1 Score: 94.7 bits (234), Expect = 9.510e-21
Identity = 48/97 (49.48%), Postives = 65/97 (67.01%), Query Frame = 0
Query:   25 MSFGSMTAAKA--DYELPSPPSDGVSDLTFSPNGSLIAAGSWDNGVRVWEMQRGYGNQGVTAVPKAQINHDAPVLCTDFSSDGTKVFSGGASKQARL 119
            MSFGS+ ++ A  D E+ S P+D VS+L FSP  + +A  SWDN  R+WE+     + G  ++PKA I H+APVLC D++ DG+KVFSGG  K  RL
Sbjct:    1 MSFGSLNSSLATKDSEIQSAPTDTVSELRFSPKANYLAGSSWDNQTRIWEV----ASNG-QSIPKAAIQHEAPVLCVDWAPDGSKVFSGGCDKAGRL 92          
BLAST of mRNA_L-elsbetiae_contig565.13992.1 vs. uniprot
Match: A0A162B2F9_DAUCS (Uncharacterized protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A162B2F9_DAUCS)

HSP 1 Score: 94.0 bits (232), Expect = 1.740e-20
Identity = 46/96 (47.92%), Postives = 61/96 (63.54%), Query Frame = 0
Query:   25 MSFG-SMTAAKADYELPSPPSDGVSDLTFSPNGSLIAAGSWDNGVRVWEMQRGYGNQGVTAVPKAQINHDAPVLCTDFSSDGTKVFSGGASKQARL 119
            MSFG + T     +E+  PP+D VS L+FSP  + + A SWDN VR WE+ R   N G   VPKAQI+H+ P LC+ +  DGT VF+GG  KQ ++
Sbjct:    1 MSFGVADTNPNKSFEVTHPPTDSVSSLSFSPKANYLVATSWDNQVRCWEVMRNGNNLGT--VPKAQISHEQPALCSTWKDDGTTVFTGGCDKQVKM 94          
BLAST of mRNA_L-elsbetiae_contig565.13992.1 vs. uniprot
Match: A0A1U8PHD0_GOSHI (protein RAE1-like n=38 Tax=malvids TaxID=91836 RepID=A0A1U8PHD0_GOSHI)

HSP 1 Score: 93.2 bits (230), Expect = 3.480e-20
Identity = 45/97 (46.39%), Postives = 58/97 (59.79%), Query Frame = 0
Query:   26 SFGSMTA---AKADYELPSPPSDGVSDLTFSPNGSLIAAGSWDNGVRVWEMQRGYGNQGVTAVPKAQINHDAPVLCTDFSSDGTKVFSGGASKQARL 119
            +FG+  A       +E+P PPSD VS L+FSP  + + A SWDN VR WE+ R      V + PKA I HD PVLC+ +  DG  VFSGG  KQ ++
Sbjct:    3 TFGAAAANHNPNKSFEVPQPPSDSVSSLSFSPKANFLIATSWDNQVRCWEISR--NGTAVASTPKASITHDQPVLCSTWKDDGMTVFSGGCDKQVKM 97          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig565.13992.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSY0_ECTSI4.900e-4982.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A5D6XL84_9STRA5.160e-2350.51Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3XAP5_GLOUD6.500e-2357.14Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7C8YWT5_OPUST1.120e-2253.01Uncharacterized protein n=1 Tax=Opuntia streptacan... [more]
A0A2D4CJX3_PYTIN3.880e-2254.12WD domain-containing protein, putative (Fragment) ... [more]
A0A0L0HKY2_SPIPD4.650e-2251.52Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
A0A7C9D3M1_OPUST6.680e-2153.01Uncharacterized protein n=1 Tax=Opuntia streptacan... [more]
A0A507E5L0_9FUNG9.510e-2149.48Uncharacterized protein n=1 Tax=Powellomyces hirtu... [more]
A0A162B2F9_DAUCS1.740e-2047.92Uncharacterized protein n=1 Tax=Daucus carota subs... [more]
A0A1U8PHD0_GOSHI3.480e-2046.39protein RAE1-like n=38 Tax=malvids TaxID=91836 Rep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 32..72
e-value: 1.1E-4
score: 31.5
coord: 83..116
e-value: 17.0
score: 9.2
IPR001680WD40 repeatPFAMPF00400WD40coord: 46..71
e-value: 3.7E-6
score: 27.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 47..76
score: 11.745
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 35..119
e-value: 3.8E-21
score: 77.4
NoneNo IPR availablePANTHERPTHR10971MRNA EXPORT FACTOR AND BUB3coord: 32..118
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..119
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.468
IPR037631mRNA export factor Gle2/RAE1PANTHERPTHR10971:SF11MRNA EXPORT FACTORcoord: 32..118
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 59..73
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 40..119
score: 13.554
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 42..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig565contigL-elsbetiae_contig565:16922..18123 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig565.13992.1mRNA_L-elsbetiae_contig565.13992.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig565 16922..18124 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig565.13992.1 ID=prot_L-elsbetiae_contig565.13992.1|Name=mRNA_L-elsbetiae_contig565.13992.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=119bp
RSKRLFSCFACLCLVTWRRNTPPKMSFGSMTAAKADYELPSPPSDGVSDL
TFSPNGSLIAAGSWDNGVRVWEMQRGYGNQGVTAVPKAQINHDAPVLCTD
FSSDGTKVFSGGASKQARL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR037631Gle2/RAE1
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf