prot_L-elsbetiae_contig5631.13974.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5631.13974.1
Unique Nameprot_L-elsbetiae_contig5631.13974.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length351
Homology
BLAST of mRNA_L-elsbetiae_contig5631.13974.1 vs. uniprot
Match: A0A6H5L7F1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F1_9PHAE)

HSP 1 Score: 458 bits (1179), Expect = 6.400e-147
Identity = 233/273 (85.35%), Postives = 249/273 (91.21%), Query Frame = 0
Query:    1 KAGRGGAALRALRLMVEQQLPVSQKQYVGAMEVCMRQGSWTSGLEVFRLLLGDLRPRGLSPKQSTWKSLAKGLRAAGQADQGVAVLRQALKAGVRHIDEQVCSILLDLCAVKGRMGLAEEIVSLMETHRIPKGPVTYCVLLKGYGRQRRLRGVDATMREMKERGVVPDVVALNAAVDAFVRCGELPKARKLLASMERSPGGSLAQTLTYNTLIKGLGRELRVGEAFEVARGMADRGCLPNEVTINSLVDICVRSGDLDRAYNLLKNPTLLPSP 273
            K+GRGG ALRALRLMVE+ L VSQKQYVGAME CMRQGSWTSGLEVFRLLL DLRPRGLSPKQSTW+SLA+GLR+AGQADQ + VLRQAL+AGV  IDEQVCSILLDLCAVKGRMGLAEEI SLMETHRIPKGPVTYCVLLKGYGRQRRLRGV++TMREMKERG+VPDVVALNAAVDA VRCGEL KAR +L SME SPGGS+AQTL+YNTLIKGLGREL V EAF VARGM D+GC P+EVT NSLVDICVRSG+LDRAYNLLKNP L P P
Sbjct:  450 KSGRGGVALRALRLMVEENLSVSQKQYVGAMEACMRQGSWTSGLEVFRLLLEDLRPRGLSPKQSTWRSLARGLRSAGQADQALVVLRQALRAGVGGIDEQVCSILLDLCAVKGRMGLAEEIASLMETHRIPKGPVTYCVLLKGYGRQRRLRGVESTMREMKERGIVPDVVALNAAVDALVRCGELSKARSVLRSMEESPGGSIAQTLSYNTLIKGLGRELLVDEAFGVARGMLDKGCSPDEVTTNSLVDICVRSGNLDRAYNLLKNPLLFPPP 722          
BLAST of mRNA_L-elsbetiae_contig5631.13974.1 vs. uniprot
Match: D8LBV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBV9_ECTSI)

HSP 1 Score: 434 bits (1115), Expect = 1.270e-141
Identity = 220/259 (84.94%), Postives = 235/259 (90.73%), Query Frame = 0
Query:   15 MVEQQLPVSQKQYVGAMEVCMRQGSWTSGLEVFRLLLGDLRPRGLSPKQSTWKSLAKGLRAAGQADQGVAVLRQALKAGVRHIDEQVCSILLDLCAVKGRMGLAEEIVSLMETHRIPKGPVTYCVLLKGYGRQRRLRGVDATMREMKERGVVPDVVALNAAVDAFVRCGELPKARKLLASMERSPGGSLAQTLTYNTLIKGLGRELRVGEAFEVARGMADRGCLPNEVTINSLVDICVRSGDLDRAYNLLKNPTLLPSP 273
            MVE+ L VSQKQYVGAME CMRQGSWTSGLEVFRLLL DLRPRGLSPKQSTW+SLA+GLR+ GQADQ + VLRQAL+AGV  IDEQVCSILLDLCAVKGRMGLAEEI SLMETHRIPKGPVTYCVLLKGYGRQRRL GV++TMREMKERG+VPDVVALNAAVDAFVRC EL KAR +L  ME SPGGS+AQTL+YNTLIKGLGREL V EAF VARGM D+GCLP+EVT NSLVDICVRSG+LDRAYNLLKNPTL P P
Sbjct:    1 MVEENLSVSQKQYVGAMEACMRQGSWTSGLEVFRLLLEDLRPRGLSPKQSTWRSLARGLRSVGQADQALVVLRQALRAGVGGIDEQVCSILLDLCAVKGRMGLAEEIASLMETHRIPKGPVTYCVLLKGYGRQRRLGGVESTMREMKERGIVPDVVALNAAVDAFVRCAELSKARTVLRRMEESPGGSIAQTLSYNTLIKGLGRELLVDEAFGVARGMLDKGCLPDEVTTNSLVDICVRSGNLDRAYNLLKNPTLFPLP 259          
BLAST of mRNA_L-elsbetiae_contig5631.13974.1 vs. uniprot
Match: A0A835YV31_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV31_9STRA)

HSP 1 Score: 214 bits (544), Expect = 2.550e-59
Identity = 123/273 (45.05%), Postives = 158/273 (57.88%), Query Frame = 0
Query:   14 LMVEQQLPVSQKQYVGAMEVCMRQGSWTSGLEVFRLLLGDLRPRGLSPKQSTWKSLAKGLRAAGQADQGVAVLRQALKAGVRH------------IDEQVCSILLDLCAVKGRMGLAEEIVSLMETHRIPKGPVTYCVLLKGYGRQRRLRGVDATMREMKERGVVPDVVALNAAVDAFVRCGELPKARKLLASMERS----------PGGSLAQTLTYNTLIKGLGRELRVGEAFEVARGMADRGCLPNEVTINSLVDICVRSGDLDRAYNLL 264
            L V Q + +S   Y   + +C+  G W + L+ F   L  +R  G  P  +T+++L +GL+ AGQ D   A+L  AL+                  DEQ+CS++LDLCA  GRM LAE IV  M    +P G VT+C+L+KGYGRQRR   VDA +R M+   V PDVV LNAAVDA+VRCGEL +A +++ +ME S           G     T TYNTLIKGLG+  R+ EAF     MA  GC  + VT NSL+D CVR G LDRAY LL
Sbjct:    2 LRVGQHVDISA--YEAVISLCVGTGDWRAALKAFERYLEGVRSAGALPPLATFRTLVRGLQKAGQVDAAAAILHIALRGASSSSSSGAAAPSLPVADEQLCSVVLDLCAETGRMTLAETIVDAMHDRGVPAGNVTHCILVKGYGRQRRAHRVDAALRGMRRARVAPDVVTLNAAVDAYVRCGELRRAEQVVRAMEASVLSSSGGGGDSGAVAPNTRTYNTLIKGLGKAGRLDEAFATLEAMAVSGCEADSVTANSLIDACVRCGQLDRAYALL 272          
BLAST of mRNA_L-elsbetiae_contig5631.13974.1 vs. uniprot
Match: A0A836CQL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQL2_9STRA)

HSP 1 Score: 196 bits (498), Expect = 1.340e-52
Identity = 116/282 (41.13%), Postives = 157/282 (55.67%), Query Frame = 0
Query:    1 KAGRGGAALRALRLMVEQQLPVSQKQYVGAMEVCMRQGSWTSGLEVFRLLLGDLRPRGLSPKQSTWKSLAKGLRAAGQADQGVAVLRQALKA----------GVRHIDEQVCSILLDLCAVKGRMGLAEEIVSLMETHRIPKGPVTYCVLLKGYGRQRRLRGVDATMREMKERGVVPDVVALNAAVDAFVRCGELPKARKLLASMERSPGGSLA-----QTLTYNTLIKGLGRELRVGEAFEVARGMADRGCLPNEVTINSLVDICVRSGDLDRAYNLLKNP 267
            + G  GA L+AL+ M+E         +  A+ +CM  G W  GL+ F   L     +G  P  ++++ + +GL  A Q D  VAVL  AL+           G    D ++C ++LDLCA K RMGLAE +V+ M   R+    V YC+L+KGYGRQ                   PDVV LNAAVDA+VRCGEL +A++++ +ME S G   A      T TYNTLIKGLG+  R+ +AF VAR M   GC P+ VT NSL++ C+R G L RA+ LL+ P
Sbjct:  111 RRGHSGAVLQALQSMLESGNTPDAGMFDAAVALCMGNGQWRLGLKAFEHHLESAESQGRLPPLASFRLVIRGLYGARQPDPAVAVLHVALRGAPSSSGGGSGGAAVADPELCCLVLDLCADKRRMGLAEGVVAAMARARVTLSAVAYCILIKGYGRQXXXXXXXXXXXXXXXXXXXPDVVTLNAAVDAYVRCGELRRAQQVVRAMEASGGAGGAGAVPPNTRTYNTLIKGLGQAGRLEDAFAVARAMTAPGCRPDAVTANSLIEACIRCGQLTRAHALLRAP 392          
BLAST of mRNA_L-elsbetiae_contig5631.13974.1 vs. uniprot
Match: A0A7S2SBE2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SBE2_9STRA)

HSP 1 Score: 127 bits (318), Expect = 4.010e-30
Identity = 82/220 (37.27%), Postives = 125/220 (56.82%), Query Frame = 0
Query:   64 STWKSLAKGLRAAGQADQGVAVLRQALK-AGVRHIDEQVCSILLDLCAVKGRMGLAEEIVSLMETHRIPKGPVTYCVLLKGYGRQRRLRGVDATMREMKERGVVPDVVALNAAVDAFVRCGELPKARKLLASMERSPG----------GSLAQ-TLTYNTLIKGLGRELRVGEAFEVARGMADRG------CLPNEVTINSLVDICVRSGDLDRAYNLLK 265
            S +  + + L A G+  + + VL   ++     HI E+   ++L+ CA    M  A E+++LM T  +P+  VTYC+L+KGYGR    + VD  + +M++ GV  DV+ LNAA+DA+VRCG L KA  LL +M+R             GSLA  + ++NTLIKGLG+   +  A  +   M D        CLPN+VT+NSL+D  VR+ ++  A  L++
Sbjct:    4 SAYLMVLRELAATGRCGEAIEVLGMLVEDVDGDHIPERAFGMVLNTCADSHHMDRAPEVLALMATAGVPRTEVTYCILIKGYGRLGSDQAVDHLLADMRKHGVKLDVITLNAAMDAYVRCGNLGKATSLLDAMKREARRLHAQGKALQGSLAPVSRSFNTLIKGLGQAGHLEGALGLLDEMRDLAYATQAQCLPNDVTLNSLLDAHVRAKNVSGALLLMR 223          
BLAST of mRNA_L-elsbetiae_contig5631.13974.1 vs. uniprot
Match: A0A5J4Z316_PORPP (Pentatricopeptide repeat-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z316_PORPP)

HSP 1 Score: 124 bits (312), Expect = 1.050e-27
Identity = 78/210 (37.14%), Postives = 119/210 (56.67%), Query Frame = 0
Query:   64 STWKSLAKGLRAAGQADQGVAVL---------RQALKAGVRHIDEQVCSILLDLCAVKGRMGLAEEIVSLMETHRIPKGPVTYCVLLKGYGRQRRLRGVDATMREMKERGVVPDVVALNAAVDAFVRCGELPKARKLLASMERSPGGSLAQTLTYNTLIKGLGRELRVGEAFEVARGMADRGCLPNEVTINSLVDICVRSGDLDRAYNLL 264
            S++  +A+ LR AG+ ++  A+L         ++A        DE++C +  DL A +  +GLA +I+S ME+H +  GP  Y  L+K YGR     GV+ T++ M  + V PD VALNAA+DA VRC ++ +A+KLL+SM  +         +YNT++KGL     V EAF + + M D G  P++VT N+L+  CV      RA  L+
Sbjct:  247 SSYALVARALRDAGRPEELAAMLTRMWAIAREKKANGFAACEPDEKMCCLAADLAAEQRNVGLARDIISEMESHGVKAGPYAYAALIKAYGRSGNDVGVERTLQRMHTQRVQPDQVALNAAIDALVRCKKVKRAQKLLSSMP-AEWSVQPNVRSYNTVMKGLAELGLVDEAFALRKEMLDLGLEPSKVTRNTLLLACVNGNAWVRAQKLV 455          
BLAST of mRNA_L-elsbetiae_contig5631.13974.1 vs. uniprot
Match: A0A7S0LHA5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LHA5_9EUKA)

HSP 1 Score: 95.9 bits (237), Expect = 5.930e-18
Identity = 66/186 (35.48%), Postives = 96/186 (51.61%), Query Frame = 0
Query:   99 EQVCSILLDLCAVKGRMGLAEEIVSLMETHRIPKGPVTYCVLLKGYGRQRRLRGVDATMREMKERGVVPDVVALNAAVDAFVRC--------GELP----------KARKLLASMERSPGGSLAQTLTYNTLIKGLGRELRVGEAFEVARGM--ADRGCLPNEVTINSLVDICVRSGDLDRAYNLL 264
            E + SI+L+ CA  GRM L+E +++ M  H +    +T+C+L+KGYGR   +  V      M+ R V PD+   NA +DA VR         GEL           +A ++L  M     G      ++NTLIKG  R  R+ +AF V R +  A      NEVT ++L+  CVR+G+L RA  +L
Sbjct:  141 EGLASIVLNGCAEAGRMDLSESVLTTMHEHEVSITALTFCILIKGYGRVADIPRVRRIYSTMRRRSVAPDLATFNALLDAIVRNIALASGVGGELTFVASSDALLAEAEQVLEDMREQ--GISPSPRSFNTLIKGYSRVGRMRDAFNVVRRLRIALGAGAANEVTYSTLIHGCVRAGELRRARQIL 324          
BLAST of mRNA_L-elsbetiae_contig5631.13974.1 vs. uniprot
Match: A0A7S3YJE3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YJE3_HETAK)

HSP 1 Score: 78.6 bits (192), Expect = 2.450e-14
Identity = 47/102 (46.08%), Postives = 61/102 (59.80%), Query Frame = 0
Query:  168 DVVALNAAVDAFVRCGELPKARKLLASMERSPGGSLA--QTLTYNTLIKGLGRELRVGEA---FEVARGMADRGCLPNEVTINSLVDICVRSGDLDRAYNLL 264
            DVV LN+ VDAFV+CG++ +AR+++A+M R   G        TYNTLIKGL R    G A   F +   M  RG  P EVT+++LV  C R+G L  A  LL
Sbjct:    2 DVVLLNSVVDAFVQCGDVRRARQVVAAMRRGEYGPACPPNARTYNTLIKGLARRGDRGAAQAAFGLVAEMEGRGLAPTEVTLHTLVAACARAGMLGDARQLL 103          
BLAST of mRNA_L-elsbetiae_contig5631.13974.1 vs. uniprot
Match: A0A7R9Y8W5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8W5_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 9.790e-11
Identity = 53/192 (27.60%), Postives = 89/192 (46.35%), Query Frame = 0
Query:   78 QADQGVAVLRQALKAGVRHID----EQVCSILLDLCAVKGR----MGLAEEIVSLMETHRIPKGPVTYCVLLKGYGRQRRLRGVDATMREMKERGVVPDVVALNAAVDAFVRCGELPKARKLLASMERS-PGGSLAQ------------TLTYNTLIKGLGRELRVGEAFEVARGMADRGCLPNEVTINSLV 248
            ++D  +A + + L  G R++      Q+  I+LD  A         GL+E  ++ M+   +    V+YC+++K YGRQR  + +D  +  + +  V  D    NA + A + CG+L  A K +  +E     G L Q            T TYN L+ G      +   F V R M +RG   +E+T N+++
Sbjct:   20 RSDDDIAYVHKLLSHGRRNLQAGEARQMYHIVLDALANGDADDRSAGLSEAFLAEMQDAGLKPNAVSYCIMVKTYGRQRDAQKLDGVVNRIADEFVELDAPLFNAIIQAHIACGDLDLAAKTIRKVEEMWRQGILGQDPRRSVKIPKPNTRTYNILLNGYAEADDIVSCFRVLRQMQERGVPADEITANTII 211          
BLAST of mRNA_L-elsbetiae_contig5631.13974.1 vs. uniprot
Match: A0A7S4BRQ8_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BRQ8_CHRCT)

HSP 1 Score: 71.6 bits (174), Expect = 2.920e-10
Identity = 34/73 (46.58%), Postives = 49/73 (67.12%), Query Frame = 0
Query:   97 IDEQVCSILLDLCAVKGRMGLAEEIVSLMETHRIPKGPVTYCVLLKGYGRQRRLRGVDATMREMKERGVVPDV 169
            +DE+V SI+L+ CA +GRM LA   V+ + +H +  G VTYC+L+KGYGR   +R VD     ++E GV PD+
Sbjct:  194 VDERVTSIVLNSCAERGRMDLAMATVTALRSHDVAFGQVTYCILVKGYGRVGDVRSVDGIFSRLREAGVSPDM 266          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5631.13974.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7F1_9PHAE6.400e-14785.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBV9_ECTSI1.270e-14184.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YV31_9STRA2.550e-5945.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CQL2_9STRA1.340e-5241.13Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SBE2_9STRA4.010e-3037.27Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A5J4Z316_PORPP1.050e-2737.14Pentatricopeptide repeat-containing protein n=1 Ta... [more]
A0A7S0LHA5_9EUKA5.930e-1835.48Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A7S3YJE3_HETAK2.450e-1446.08Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7R9Y8W5_9STRA9.790e-1127.60Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S4BRQ8_CHRCT2.920e-1046.58Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 206..251
e-value: 8.0E-10
score: 38.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 135..169
e-value: 3.2E-8
score: 31.2
coord: 208..241
e-value: 4.4E-7
score: 27.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 135..165
e-value: 3.0E-4
score: 20.8
coord: 171..198
e-value: 0.084
score: 13.2
coord: 102..128
e-value: 1.4
score: 9.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 98..132
score: 7.454
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 240..274
score: 6.862
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 168..198
score: 8.451
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 133..167
score: 10.775
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 23..61
score: 5.009
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 205..239
score: 10.589
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 62..96
score: 7.355
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..144
e-value: 8.3E-16
score: 59.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 152..293
e-value: 1.4E-28
score: 102.3
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 2..266

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5631contigL-elsbetiae_contig5631:517..6853 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5631.13974.1mRNA_L-elsbetiae_contig5631.13974.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5631 516..6853 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5631.13974.1 ID=prot_L-elsbetiae_contig5631.13974.1|Name=mRNA_L-elsbetiae_contig5631.13974.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=351bp
KAGRGGAALRALRLMVEQQLPVSQKQYVGAMEVCMRQGSWTSGLEVFRLL
LGDLRPRGLSPKQSTWKSLAKGLRAAGQADQGVAVLRQALKAGVRHIDEQ
VCSILLDLCAVKGRMGLAEEIVSLMETHRIPKGPVTYCVLLKGYGRQRRL
RGVDATMREMKERGVVPDVVALNAAVDAFVRCGELPKARKLLASMERSPG
GSLAQTLTYNTLIKGLGRELRVGEAFEVARGMADRGCLPNEVTINSLVDI
CVRSGDLDRAYNLLKNPTLLPSPAEAEAAAAAAAVSTSVSPTTPPAGGGD
WAGPIGEVEVEVGAADRVDSSRGKGGGYAAEKAPAEVESERAAAGAGAGA
T
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf