mRNA_L-elsbetiae_contig562.13954.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig562.13954.1 vs. uniprot
Match: D7G6V1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6V1_ECTSI) HSP 1 Score: 441 bits (1135), Expect = 3.740e-148 Identity = 203/262 (77.48%), Postives = 231/262 (88.17%), Query Frame = 1 Query: 1 TEPFFPTENCAGRCDQDFRGLFPPVHRPLSLRDDVSETNRGLWVFEQPLHTIPTVRMFNRMAVYALADGTVLAYNPIAPTEETLREIKESFGSPDHIIVPTTAYNSMVHVKGWAERFPRATFWGLEGVKLPGAKFTKELTMESFPESWKAELDLSILEGNDMFRECFLLHRTTRSVFALDSLVEMGEENIPHPLLRAGSVLTGNFGRPVCPTKSLLWNRKKCKSAISKVLEWDFDKVYATHGECPIQDAKTAIRDEFQFLWD 786 TEP F + R DQ F GLFPPVHRPL RD+ SE RGLW+FEQPL T+PTV M++RMAVYAL+DG++ YNPIAPTEETL+EI ++FG PDHIIVPTTA+N+++ V GWAERFPRATFWGLEGVKLPGAKFTK+LTMESFPESWKAELD+SILEGN +FRECFLLHRTTRSVFA+DS VEMGE NIP+P+LRA S ++GNFGRPVCPTKSLLWNR+KCKSA+S+VL+WDFDKVYA HGECPIQDAK AIR EFQFLWD Sbjct: 39 TEPLFAPDCAPERHDQAFPGLFPPVHRPLRWRDEDSEPMRGLWLFEQPLQTVPTVEMYSRMAVYALSDGSICVYNPIAPTEETLQEISDAFGGPDHIIVPTTAWNNLLFVAGWAERFPRATFWGLEGVKLPGAKFTKDLTMESFPESWKAELDVSILEGNGIFRECFLLHRTTRSVFAMDSFVEMGEGNIPNPVLRAASKMSGNFGRPVCPTKSLLWNREKCKSAMSRVLDWDFDKVYANHGECPIQDAKEAIRGEFQFLWD 300
BLAST of mRNA_L-elsbetiae_contig562.13954.1 vs. uniprot
Match: A0A836C726_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C726_9STRA) HSP 1 Score: 246 bits (628), Expect = 9.100e-73 Identity = 121/246 (49.19%), Postives = 162/246 (65.85%), Query Frame = 1 Query: 46 QDFRGLFPPVHRPLSLRDDVSETNRGLWVFEQPLHTIPTVRMFNRMAVYALADGTVLAYNPIAPTEETLREIKESFG-SPDHIIVPTTAYNSMVHVKGWAERFPRATFWGLEGVKLPGAKFTKELTMESFPESWKAELDLSILEGNDMFRECFLLHRTTRSVFALDSLVEMGEENIPHPLLRAGSVLTGNFGRPVCPTKSLLWNRKKCKSAISKVLEWDFDKVYATHGECPIQDAKTAIRDEFQFL 780 Q++ +FPP RPL++ D VS + + VF+QP R R A+Y L DGTV+ YNPIAPTEETL E ++FG PDHIIVPT +Y +V V GW RFP A FW L GV+L GA+ +K+LT ES P S EL++++++ + + +EC+LLHR T+S F++DS + +E+I L AG G + RP C TK L+WNR C+ AIS+VL WDFDKV THG CPI +AK A+ + F FL Sbjct: 39 QEWETMFPPSTRPLTVLDHVSTAD--MVVFQQPHGLGSLYRHMMRHAIYKLKDGTVIVYNPIAPTEETLHETVQTFGREPDHIIVPTNSYEHLVMVPGWTRRFPNAVFWSLPGVELDGAQISKDLTEESLPGS--GELEIAVMDASPLLQECYLLHRPTKSAFSIDSFNWIADEHIASSLGGAGIKAVGGYNRPHCSTKMLMWNRDNCRRAISRVLSWDFDKVIPTHGVCPIPNAKEAMTEAFSFL 280
BLAST of mRNA_L-elsbetiae_contig562.13954.1 vs. uniprot
Match: A0A8A4TK56_9BACT (DUF4336 domain-containing protein n=1 Tax=Sulfidibacter corallicola TaxID=2818388 RepID=A0A8A4TK56_9BACT) HSP 1 Score: 80.5 bits (197), Expect = 2.580e-13 Identity = 64/234 (27.35%), Postives = 110/234 (47.01%), Query Frame = 1 Query: 82 PLSLRDDVSETNRGLWVFEQPLHTIPTVRMFNRMAVYALA-DGTVLAYNPIAPTEETLREIKESFGSPDHIIVPTTAYNSMVHVKGWAERFPRATFWGLEG--VKLPGAKFTKELTMESFPESWKAELDLSILEGNDMFRECFLLHRTTRSVFALDSLVEMGEEN-IPHPLLRAGSVLTGNFGRPVCPTKSLLWNRKKCKSAISKVLEWDFDKVYATHGECPIQDAKTAIRDEF 771 P L + E G+W QP +++ RM V L G + ++PI E+ L++ E+ GS H+ P ++ + V + ++P A F+ G +K P +F E+ E W +EL ++ G E H TTR++ D + + EE+ I +L G FG K+L+ +R + +ISK+LEWDF+++ +HG +D ++A + F Sbjct: 5 PYGLLEPFEE---GIWTCRQPFRFFG-LQIGARMTVIDLTGQGDLFVHSPIKLGEK-LKQDLEALGSVRHVAAPNCWHH--LFVGDYKAQYPDARFYCSPGLDIKRPDIEFD-EVLEEGKAYPWSSELAHHVVGGCPTLNEVVFFHATTRTLVVTDIGLHICEESPITTRMLFRVMGNYGRFGWAPIEKKALIKDRVLFQQSISKILEWDFERIVLSHGRLVREDGRSAFQKAF 230
BLAST of mRNA_L-elsbetiae_contig562.13954.1 vs. uniprot
Match: A0A0D8CMT2_9GAMM (Methanol oxidase n=1 Tax=Thalassomonas actiniarum TaxID=485447 RepID=A0A0D8CMT2_9GAMM) HSP 1 Score: 71.2 bits (173), Expect = 3.490e-10 Identity = 53/218 (24.31%), Postives = 95/218 (43.58%), Query Frame = 1 Query: 124 LWVFEQPLHTIPTVRMFNRMAVYALADGTVLAYNPIAPTEETLREIKESFGSPDHIIVPTTAYNSMVHVKGWAERFPRATFWGLEGVKLPGAKFTKELTMESFPESWKAELDLSILEGNDMFRECFLLHRTTRSVFALDSLVEMGEENIPHPLLRAGSVLT-------GNFGRPVCPTKSL---LWNRKKCKSAISKVLEWDFDKVYATHGECPIQDA 747 +WV E + T RM + L+DG + ++P A + E +E+ E+ G I+ + +NS + + W + FP A + G+ L ++F W+ +L+ + G F E H+ T+S+ D + +E P V+T G G+ V P + + N+ S +++V W+FD++ THG+ DA Sbjct: 8 IWVHEDVMSMAGTPLRL-RMTIVRLSDGRLWLHSPTALSSELKKEV-EAQGQVAFIVGASNGHNSWL--QQWQDAFPEAGLYVSGGIPKKLGLSQYHLLDQAFDNIWRDDLEREYMPGVSFFNESVFFHKKTKSLIVTDFIQNHSDETPPG----LAGVITKCIFRPLGFKGKCVAPPLKMGFTIKNKTDFASFVTRVKNWNFDRIVVTHGDIIEADA 217
BLAST of mRNA_L-elsbetiae_contig562.13954.1 vs. uniprot
Match: UPI001D64C096 (DUF4336 domain-containing protein n=1 Tax=Waterburya agarophytonicola TaxID=2886916 RepID=UPI001D64C096) HSP 1 Score: 70.9 bits (172), Expect = 4.960e-10 Identity = 59/235 (25.11%), Postives = 111/235 (47.23%), Query Frame = 1 Query: 109 ETNRGLWVFEQPLHTIPTVRMFNRMAVYALADGTVLAYNPIAPTEETLREIKESFGSPDHIIVPTTAYNSMVHVKGWAERFPRATFWGLEGV--KLPGAKFTKELTMESFPESWKAELDLSILEGNDMF--------RECFLLHRTTRSVFALDSLVEMGEENIPHPLLRAGSVLTG-NFGRPVCPTKSLLWNRKKCKSAISKVLEWDFDKVYATHGECPIQDAKTAIRDEFQFL 780 + + LWV EQPL + + + RM V LAD ++L +PIA T E +++ S G+ ++I P ++ + + + +P+A G+ K P K K LT + + +EL+ + G + E H +T+++ DS + + P + A ++ +P K + +++ K+AI+K+L WDF++V HG+ +AK + +Q+L Sbjct: 4 QLDNNLWVAEQPLKFMG-LPVGTRMTVIRLADNSLLLISPIAITPEIKQQLN-SLGTVRYLIAPNLFHH--LFLADCQKVYPQAQIIAPPGLETKQPQLKIAKTLTQDEI--DFNSELEYQLFSGFQILIIPQIKIANEIVFYHPSTKTLIITDSAFNF-DGSYPWIIQLAMRMIDSYQTLKPSWLEKIAVRDKQAAKTAIAKILAWDFERVIMAHGKIVETNAKQQLAAGYQWL 231
BLAST of mRNA_L-elsbetiae_contig562.13954.1 vs. uniprot
Match: A0A7S4C8N9_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4C8N9_9EUGL) HSP 1 Score: 69.3 bits (168), Expect = 1.510e-8 Identity = 55/246 (22.36%), Postives = 105/246 (42.68%), Query Frame = 1 Query: 58 GLFPPVHRPLSLRDDVSETNRGLWVFEQPLHTIPTVRMFNRMAVYALADGTVLAYNPIAPTEETLREIKESFGSPDHIIVPTTAYNSMVHVKGWAERFPRATFWGLEGVK--LPGAKFTKELTM-ESFPESWKAELDLSILE-------GNDMFRECFLLHRTTRSVFALDSLVEMGEENIPHPLLRAGSVLTGNFGRPVCP--TKSLLWNRKKCKSAISKVLEWDFDKVYATHGECPIQDAKTAI 759 G PP ++ + + LWV E+P ++ + +MAV LADG++ ++P+ + L+ + G +I+ P Y + + + W + +P A +G G K P F E+ + + PE+W ++L ++ ++ + F E +H T+++ D N P P + ++ +R + K+A+ +++ WDFD V HG Q K A Sbjct: 169 GRVPPSEWSNPGKEVLKKVAPDLWVAERPF-IWNSIDVGGKMAVVRLADGSLWVHSPVE-LDAPLKAALAALGPVKYIMSPN--YEHVKYAQQWIDAYPDAIAYGCPGAKEKFPQISFQAEVGVGNAVPEAWASDLLVTYMDCEHNPFTRSPFFNEVVFVHLPTKTLIVTDLFW-----NYPIDAPAGTRAWKWGMDEVYLPFYKQFMICDRSRFKTAVDRIVAWDFDSVLPCHGTYIAQGGKEAF 405
BLAST of mRNA_L-elsbetiae_contig562.13954.1 vs. uniprot
Match: A0A232LW13_9EURO (Uncharacterized protein n=1 Tax=Elaphomyces granulatus TaxID=519963 RepID=A0A232LW13_9EURO) HSP 1 Score: 61.2 bits (147), Expect = 1.460e-6 Identity = 56/244 (22.95%), Postives = 99/244 (40.57%), Query Frame = 1 Query: 142 PLHTIPTVRMFNRMAVYALADGTVLAYNPIAPTEETLREIKESFGSPDHIIVPTTAYNSMVHVKGWAERFPRATFWGLEGV-----KLPGAKFTK--------ELTMESFPESWKAELDLSILEGNDMFRECFLLHRTTRSVFALDSLVEM-GEENIPHPLLRAG-SVLTGNFGRPVCPT----------KSLLW------NRKKCKSAISKVLEWDFDKVYATHGECPIQDAKTAIRDEFQFL 780 P + R + LA G++ ++P+ T E R I + +I P ++ +H+ W + FP A EG+ P K T+ + + + + +E D+ + + RE LH+ TR+V D L + G E RAG S +G + + P K W +R+ +++K+ +WDFD++ HG+ AKT R+ F++ Sbjct: 29 PFSRFGVFKFGGRGTIVKLASGSLAVFSPVMLTPEVQRTIASEGSNLKYIAAPDIEHH--LHLTAWKKAFPNAEIIAPEGLWEKRQANPDFKDTEFKHIFKSEDKGKHNISDEFDSEFDVEYVSSHGS-REIVFLHKPTRTVIEADLLFNLPGSEQYS----RAGVSPTSGILTKLILPLVSAKPPATGHKRFAWYVLSARDREGFAKSMTKIDQWDFDRLIPCHGDVIETGAKTVFRNVFEWF 265
BLAST of mRNA_L-elsbetiae_contig562.13954.1 vs. uniprot
Match: A0A8J2TFJ8_9CHRO (Uncharacterized protein n=2 Tax=Chroococcus sp. FPU101 TaxID=1974212 RepID=A0A8J2TFJ8_9CHRO) HSP 1 Score: 62.0 bits (149), Expect = 1.880e-6 Identity = 61/201 (30.35%), Postives = 93/201 (46.27%), Query Frame = 1 Query: 61 LFPPVHRPLSLRDDVSETNRGLWVFEQPLHTIPTVRMFNRMAVYALADGTVLAYNPIAPTEETLR---EIKESFGSPDHIIVPT-TAYNSMVHVKGWAERFPRATFWG------------LEGVKLPGAKFTKELTMESFPESWKAELDLSILEGNDM----FRECFLLHRTTRSVFALDSLVEMGEENI------PHPLL 585 ++P R ++ +S T +W FEQ L I V + RM V LA G +L Y P+APT+E +R E+ E G +II+PT +A V V +A RFP+A + L + P + T L +S + E D IL D+ F E L H+ ++++ D++V + E P+PLL Sbjct: 23 IYPYSQRRTLRQEIISNT---IWTFEQ-LQGIFYVVVPIRMTVIKLAQGGLLVYAPVAPTDECIRLVNELVEQHGDIKYIILPTISAVEHKVFVGPFAYRFPKAQVYASPYHWSFPLNLPLSWLGFPPDR-TYILPKDSSQVPFADEFDYRILGPIDLGPGRFAEVALFHKQSQTLLLTDTIVSVPTEPPAIIRLDPYPLL 218
BLAST of mRNA_L-elsbetiae_contig562.13954.1 vs. uniprot
Match: A0A7S3C6B3_9VIRI (Hypothetical protein n=2 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3C6B3_9VIRI) HSP 1 Score: 61.6 bits (148), Expect = 3.070e-6 Identity = 47/161 (29.19%), Postives = 80/161 (49.69%), Query Frame = 1 Query: 124 LWVFEQPLHTIPTVRMFNRMAVYALADGTVLAYNPIAPTEETLREIKESFGSPDHIIVPTTAYNSMVHVKGWAERFPRATFWGLEG-----VKLP------GAKFTKELTMES---FPESWKAELDLSILEGNDMFRECFLLHRTTRSVFALDSLVEMGEE 564 +W EQ + V + RM V LADG +L + P+APT E +R ++E G ++++PTTA V + +A +FP + G + LP GAK + E F + ++ LS+ G F E ++H++T+++ +DS+V+ E Sbjct: 93 MWGLEQTQGVL-NVLVNVRMTVVKLADGGLLCWCPVAPTRECVRLVEE-LGEVKYVVLPTTALEHKVFLGPFARKFPDCEVYIAPGQYSVPLDLPFQWLGLGAKRVDGVLGECELPFADEFEGPEILSLSLGTGTFCEVAMVHKSTKTLLIVDSVVQCPAE 251
BLAST of mRNA_L-elsbetiae_contig562.13954.1 vs. uniprot
Match: UPI001EF17C04 (DUF4336 domain-containing protein n=1 Tax=Halomicronema sp. CCY15110 TaxID=2767773 RepID=UPI001EF17C04) HSP 1 Score: 58.9 bits (141), Expect = 6.590e-6 Identity = 57/239 (23.85%), Postives = 108/239 (45.19%), Query Frame = 1 Query: 103 VSETNRGLWVFEQPLHTIPTVRMFNRMAVYALADGTVLAYNPIAPTEETLREIKESFGSPDHIIVPTTAYNSMVHVKGWAERFPRATFWGLEGV--KLPGAKFTKELTMESFPESWKAELDLS--------ILEGNDMFRECFLLHRTTRSVFALDSLVEMGEENIPHPLLRAGSVLTGNFGRPVCPTKSLLW---NRKKCKSAISKVLEWDFDKVYATHGECPIQDAKTAIRDEFQFL 780 ++E LW Q L + + + RM V L + ++ +P+ P + R ++ G+ H+I P ++ ++ +P+A WG++G+ K P +F L P S+ L +L+G + E H+ ++++ D +E P A VL G++ + + PT+ W ++ + +I +VL+W+FD V HG DAKT +R+ F++ Sbjct: 4 LTEMAPDLWTATQLLRFLG-LEVGCRMTVVRLPNRELVLISPL-PLKHGDRARLDALGTVKHLIAPNRFHH--LYFGNAQALYPQAQAWGVQGLAQKRPDLRFDGTLNE---PGSFADVLHYLPVEGFGSIMLQGVQLAHETVFWHQPSQTLILTDIAFNF-DETFPFTSRLAAQVL-GSY-QTLRPTRLEKWGSFDKDAVEQSIRQVLQWEFDLVIPGHGSIIENDAKTQLREGFEWF 232 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig562.13954.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig562.13954.1 >prot_L-elsbetiae_contig562.13954.1 ID=prot_L-elsbetiae_contig562.13954.1|Name=mRNA_L-elsbetiae_contig562.13954.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=207bp MFNRMAVYALADGTVLAYNPIAPTEETLREIKESFGSPDHIIVPTTAYNSback to top mRNA from alignment at L-elsbetiae_contig562:4937..9835+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig562.13954.1 ID=mRNA_L-elsbetiae_contig562.13954.1|Name=mRNA_L-elsbetiae_contig562.13954.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4899bp|location=Sequence derived from alignment at L-elsbetiae_contig562:4937..9835+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig562:4937..9835+ >mRNA_L-elsbetiae_contig562.13954.1 ID=mRNA_L-elsbetiae_contig562.13954.1|Name=mRNA_L-elsbetiae_contig562.13954.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1242bp|location=Sequence derived from alignment at L-elsbetiae_contig562:4937..9835+ (Laminarionema elsbetiae ELsaHSoW15)back to top |