prot_L-elsbetiae_contig5537.13829.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5537.13829.1
Unique Nameprot_L-elsbetiae_contig5537.13829.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length490
Homology
BLAST of mRNA_L-elsbetiae_contig5537.13829.1 vs. uniprot
Match: A0A6H5L574_9PHAE (PKD_channel domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L574_9PHAE)

HSP 1 Score: 401 bits (1030), Expect = 3.820e-135
Identity = 224/301 (74.42%), Postives = 246/301 (81.73%), Query Frame = 0
Query:  191 MLTFHARMSIVTDTLSRASTHLDHFLFVFFLVILVFSSLTWLLVGSSTQEFSTLEEAWKSVTRISLGESENFYPQILAAQPSVGPVVVVLYQVLGIVLLLNVVIAILLEAYRGVVGGMRGEDTIFQSFIAFVGMTLCSLRTRIRWGNAWIRWRLAGSRSIAPHERQRRPSLKAFLQGSTGIYGVDGRLVVMMRRPHDRLTMEDRQLSFNCPRYITVTEMQALIQATPVPAAVADRLVRKIVHGWVFRSDEKLPSDFRRSSPSSSREYGSGN------VANLSSGSGSATDSSLRMLRRPSS 485
            MLTFH RMSIVTDTLSRASTHL+HFLFVFFLVIL F++LTWLLVGSST+EFSTLE+AW+SV RISLGESENFYPQIL AQP+VGPVVVVLYQVLG+VLLLNVVIAILLEAYRGV  GM GEDTIFQSFIAFVGM+ CSL TRIRW  A IRWRL G R+ +      RPSLK FLQGSTG+ GVDGR VVM+RRP +  T+  RQLSFNCPRYITVTEMQALI+ATPVPA VADRLVRKIVH WVFRSDE++     +S PSSS EYG+G       V   +    S+TDSS  M RRPSS
Sbjct:    1 MLTFHKRMSIVTDTLSRASTHLNHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWRSVIRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLEAYRGVASGMHGEDTIFQSFIAFVGMSWCSLTTRIRWATACIRWRLGGRRNTS------RPSLKIFLQGSTGVCGVDGRPVVMVRRPPESSTILGRQLSFNCPRYITVTEMQALIEATPVPARVADRLVRKIVHDWVFRSDERITGGSFQS-PSSSGEYGNGTGGGNGGVTATNLRRTSSTDSSRPMQRRPSS 294          
BLAST of mRNA_L-elsbetiae_contig5537.13829.1 vs. uniprot
Match: D7FTQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ4_ECTSI)

HSP 1 Score: 248 bits (633), Expect = 1.480e-72
Identity = 122/191 (63.87%), Postives = 152/191 (79.58%), Query Frame = 0
Query:    1 MLLMDHLDVIPEDEVRSVTVQLVTYNGNQPSAYGTISIDFDFSHGGKVEMKQLVTAYILKGNIGQADDSRTRWLLGLIFTFMTFAMMWHDTKKWFRARRSKVKRNCCHCCCGFTFFSLILINILMWLVWAGFGETITFETVVQNDNNN-DRVLKAVTEQLLALQQAAVISAAYDIVFLLTTLTGLYRWIFQ 190
            +L+M+ LDVIP DEVRSV VQLVTYNGNQ SA+G+I+I F F HGG+VE  +LVTAYIL GN GQ +D R RW+LGLIF  MT AM+ HDTKKW+RAR +K +RN CHCCCGFTFF+LI++N+LMWL WA  G+ I F+ V+Q  ++  D V+ A+T Q+LALQ+AA+ S +  I+FLLTTL GLYRWIFQ
Sbjct:  336 LLVMEDLDVIPRDEVRSVNVQLVTYNGNQGSAFGSINIGFTFDHGGEVEAHELVTAYILTGNAGQGND-RIRWILGLIFVCMTLAMIRHDTKKWYRARHAKARRNKCHCCCGFTFFTLIILNVLMWLGWASLGKVIAFDVVLQGTSSEEDSVMAALTGQILALQEAALFSWSLHIIFLLTTLAGLYRWIFQ 525          
BLAST of mRNA_L-elsbetiae_contig5537.13829.1 vs. uniprot
Match: D7FTQ7_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ7_ECTSI)

HSP 1 Score: 227 bits (578), Expect = 2.230e-69
Identity = 121/135 (89.63%), Postives = 127/135 (94.07%), Query Frame = 0
Query:  191 MLTFHARMSIVTDTLSRASTHLDHFLFVFFLVILVFSSLTWLLVGSSTQEFSTLEEAWKSVTRISLGESENFYPQILAAQPSVGPVVVVLYQVLGIVLLLNVVIAILLEAYRGVVGGMRGEDTIFQSFIAFVGMT 325
            MLTFH RMSIVTDTLSRASTHLDHFLFVFFLVIL F++LTWLLVGSST+EFSTL EAW SVTRISLGESENFYPQIL AQP+VGPV VVLYQVLG+VLLLNVVIAI LEAYRGVV GMRGEDTIFQSFIAFVGM+
Sbjct:    1 MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLVEAWGSVTRISLGESENFYPQILDAQPTVGPVAVVLYQVLGVVLLLNVVIAIFLEAYRGVVSGMRGEDTIFQSFIAFVGMS 135          
BLAST of mRNA_L-elsbetiae_contig5537.13829.1 vs. uniprot
Match: D7FTQ6_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ6_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 1.110e-54
Identity = 112/178 (62.92%), Postives = 125/178 (70.22%), Query Frame = 0
Query:  125 MWLVWAGFGETITFETVVQNDNNN-DRVLKAVTEQLLALQQAAVISAAYDIVFLLTTLTGLYRWIFQMLTFHARMSIVTDTLSRASTHLDHFLFVFFLVILVFSSLTWLLVGSSTQEFSTLEEAWKSVTRISLGESENFYPQILAAQPSVGPVVVVLYQVLGIVLLLNVVIAILLEAY 301
            MWL WA  G+ I  + V+Q  ++  D VL A                                    MLTFH RMSIVTDTLSRASTHLDHFLFVFFLVIL F++LTWLLVGSST+EFSTLE+AW+SVTRISLGESENFYPQIL AQP+VGPVVVVLYQVLG+VLLLNVVIAILLE +
Sbjct:    1 MWLGWASLGKVIANDVVLQGTSSEEDSVLDA------------------------------------MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWQSVTRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLETF 142          
BLAST of mRNA_L-elsbetiae_contig5537.13829.1 vs. uniprot
Match: A0A6H5JES1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JES1_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 1.450e-46
Identity = 111/215 (51.63%), Postives = 128/215 (59.53%), Query Frame = 0
Query:  299 EAYRGVVGGMRGEDTIFQSFIAFVGMTL--------------------CSLRTRIRWGNAWIRWRLAGSRSIAPHERQRRPSLKAFLQGSTGIYGVDGRLVVMMRRPHDRLTMEDRQLSFNCPRYITVTEMQALIQATPVPAAVADRLVRKIVHGWVFRSDEKLPSDFRRSSPSSSREYGSGN------VANLSSGSGSATDSSLRMLRRPSSVA 487
            +AYRGVV GMRGEDTI  SFIAFVGM+                     C L+T IRW  A+IRWRLAG R+  P +  RRPSL+ FLQGSTG+ GVDGR VVM+R   +  T+  RQL              ALI+A PVPA VA RLVRKIVH WVFRSDE++     +S PSSS EYGSG       V  LS+     TDSS  MLRR SS +
Sbjct:   13 KAYRGVVSGMRGEDTILPSFIAFVGMSWWVLHSRQTARQPEQILTSVSCVLKTGIRWATAYIRWRLAGRRNTPPQDGPRRPSLRMFLQGSTGVCGVDGRPVVMVRGLPESSTILGRQLP------------AALIEAFPVPARVAGRLVRKIVHEWVFRSDERITGGVSQS-PSSSGEYGSGTGGGNGGVTVLSTRRTYCTDSSRPMLRRWSSFS 214          
BLAST of mRNA_L-elsbetiae_contig5537.13829.1 vs. uniprot
Match: A0A6H5JIW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIW8_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 1.070e-37
Identity = 88/159 (55.35%), Postives = 107/159 (67.30%), Query Frame = 0
Query:  138 FETVVQNDNNN-DRVLKAVTEQLLALQQAAVISAAYDIVFLLTTLTGLYRWIFQMLTFHARMSIVTDTLSRASTHLDHFLFVFFL--------------------------VILVFSSLTWLLVGSSTQEFSTLEEAWKSVTRISLGESENFYPQILAA 269
            F+ V+Q+ ++  D VL A+T  +LALQ+A + S +  I+FLLTTL GLY WIFQM TFH RMSIV DTLSRASTHL  FLFVFFL                          V+L F++LT+LLVGSST+E STLE+AW+SV RIS GES+N YPQIL A
Sbjct:    3 FDVVLQDTSSEADSVLGALTGPILALQEAELFSWSLYIIFLLTTLAGLYPWIFQMFTFHKRMSIVPDTLSRASTHLTQFLFVFFLERLTQLPDKRCLGVLVLVVVLTTPMVVVLAFAALTFLLVGSSTKEISTLEDAWRSVIRISPGESDNLYPQILDA 161          
BLAST of mRNA_L-elsbetiae_contig5537.13829.1 vs. uniprot
Match: D7G2W7_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2W7_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 5.230e-25
Identity = 98/323 (30.34%), Postives = 173/323 (53.56%), Query Frame = 0
Query:   13 DEVRSVTVQLVTYNGNQPSAYGTISIDFDFSHGGKVEMKQLVTAYILKGNIGQADDSRTRWLLGLIFTFMTFAMMWHDT-KKWFRAR--RSKVKRNCCHC-CCGFTFFSLILINILMW--LVWAGFGETIT-FETV-VQNDNNNDRVLKAVTEQL--LALQQAAVISAAYDIVFLLTTLTGLYRWIFQMLTFHARMSIVTDTLSRASTHLDHFLFVFFLVILVFSSLTWLLVGSSTQEFSTLEEAWKSVTRISLGESENFYPQILAAQPSVGPVVVVLYQVLGIVLLLNVVIAILLEAYRGVV--GGMRGEDTIFQSFIAFVG 323
            D VRSV+++  TYNG     +  + I   F+ GG+V+M   V  + +    G +     R +    F  M    +  D  + W   R  R ++  +  H      T  +L+   + +W  ++W     T   FE +   + NN    ++A +E+L  +AL++    +AA        ++ GL R +F ML FH R+S+VTD L+ ++ HL HF  +FF+V+ V+S+L W++ G S+  F+T  +++ ++TRI+LGE +N YP ++    +   +++V YQ L  +LLLN+VI+ILL+A++ V     +   DT++Q+ +  +G
Sbjct:   60 DAVRSVSLRFNTYNGQCDGLFSFVDITALFTLGGEVKMVTSVEVFSMPFFFGSSPAIVGRAIAMFAFGLMLVIYIGKDVLRAWREVRDGRHRLSMSLRHVPVTTATALNLVGDCVFLWNLVLWVNVAVTAAKFELIPTLSYNNASEQVRAFSEELALVALERWKRDAAAVA-----GSIFGLTR-LFIMLRFHPRLSLVTDVLTASAVHLVHFFIMFFMVVGVYSNLVWVIFGPSSLLFATWTKSFVTMTRIALGEFDNIYPLMVEIDGAAAFMIIVTYQTLQCILLLNIVISILLDAFQMVQKRNSVVAADTLWQTVMTTLG 376          
BLAST of mRNA_L-elsbetiae_contig5537.13829.1 vs. uniprot
Match: A0A8J5X0G5_DIALT (PKD_channel domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X0G5_DIALT)

HSP 1 Score: 75.1 bits (183), Expect = 1.420e-10
Identity = 61/221 (27.60%), Postives = 112/221 (50.68%), Query Frame = 0
Query:  116 FSLILINILMWLVWAGFGETITFETVVQNDN----NNDRVLKAVTEQLLALQQAAVISAAYDIVFLLTTLTGLYRWIFQMLTFHARMSIVTDTLSRASTHLDHFLFVFFLVILVFSSLTWLLVGSSTQEFSTLEEAWKSVTRISLGESENFYPQILAAQPSVGPVVVVLYQVLGIVLLLNVVIAILLEAYRGVVGGMRGEDTIFQSFIAFVGMTLCSLRTR 332
            ++L ++NI++W+ +A  G        V+       ++  +     E L  L+ A      + IV  +  +   +R +F+ L FH + S+VT TL RA   L HFL VF +V+++++ + + ++G   + ++TL +A  S+  + + +    +  I+   P VGPV    Y +L  ++L+NV++AILL+AY  V    R  + I+   I    +   SL  R
Sbjct:  461 YALAVLNIVLWVKFAVEGAQYRMPDFVEKQGTYAPDSHELWGEFMENLGLLETAEDDFVNFTIVQSVLLMVLTFR-LFKFLAFHQQFSLVTATLLRAGASLAHFLVVFAIVLVMYAFVGFNMLGHKLERYNTLGKAINSMCSMLVFDDTVSFADIMDVAPLVGPVFYWSYFILSSLMLINVLLAILLDAYASVSRASRTTNFIWVDLIVQYRLFRTSLTDR 680          
BLAST of mRNA_L-elsbetiae_contig5537.13829.1 vs. uniprot
Match: A0A6H5JEJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ3_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 3.010e-8
Identity = 29/44 (65.91%), Postives = 36/44 (81.82%), Query Frame = 0
Query:    1 MLLMDHLDVIPEDEVRSVTVQLVTYNGNQPSAYGTISIDFDFSH 44
            +L+M+ LDVIP  EVRSV VQLVTYNGNQ SA+G+I++ F F H
Sbjct:   66 LLVMEDLDVIPRHEVRSVNVQLVTYNGNQGSAFGSINLGFTFDH 109          
BLAST of mRNA_L-elsbetiae_contig5537.13829.1 vs. uniprot
Match: A0A8K1CIA9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIA9_PYTOL)

HSP 1 Score: 60.8 bits (146), Expect = 3.340e-6
Identity = 76/300 (25.33%), Postives = 134/300 (44.67%), Query Frame = 0
Query:   16 RSVTVQLVTYNGNQPSAYGTISIDFDFSHGGKVEMKQLVTAYILKGNIGQADDSRTRWLLGLIFTFMTFAMMWH-------DTKKWFRARRSKVKRNCCHCCCGFTFFSLILINILMWLVWAGFGETITFETV---VQNDNNNDRV-LKAVTEQLLALQQAAVISAAYDIVFLLTTLTGLYRWIFQMLTFHARMSIVTDTLSRASTHLDHFLFVFFLVILVFSSLTWLLVGSSTQEFSTLEEAWKSVTRISLGESENFYPQILAAQPSVGPVVVVLYQVLGIVLLLNVVIAILLEAYRGV 304
            + + + +VTYNG +   Y    +  DF  GG +E+   +T  I      +        L+G+ F        WH       D + + R   S    + C       F+ L    + M +    F E +    V     + N+++R+ L AVT+   AL++ A I+ A  ++ +L+    L   I     FH R++I+T T++ A      F  VF ++ + FS    +L G   ++FSTL   +++   +  G  +  Y  I   Q  VG +    Y V+  ++LLN+++AI+L++Y  V
Sbjct:  210 QQLVITVVTYNG-ELQGYTVSKLQLDFHQGGYIELSSTITPTI-SDPYKKTAAITLDVLVGICFLATILDPAWHFVKAIRQDGRHFLRKIESWGLVDLCSTGFVAAFYGLWFSMVAM-MYTKEFRENLARLVVSGKTFDANSDERLGLLAVTD---ALEEVANITIAMRLLAMLSVF-ALGAQILTQFRFHPRLNILTRTIANALHQFAAFFVVFIVIFMTFSVSGMVLFGDRVEDFSTLPRTFEACINMLFGNFD--YSIIRNLQAPVGMLYYWAYMVVVCLVLLNMMLAIVLDSYAEV 500          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5537.13829.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5L574_9PHAE3.820e-13574.42PKD_channel domain-containing protein n=1 Tax=Ecto... [more]
D7FTQ4_ECTSI1.480e-7263.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTQ7_ECTSI2.230e-6989.63Transient Receptor Potential Channel n=1 Tax=Ectoc... [more]
D7FTQ6_ECTSI1.110e-5462.92Transient Receptor Potential Channel n=1 Tax=Ectoc... [more]
A0A6H5JES1_9PHAE1.450e-4651.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JIW8_9PHAE1.070e-3755.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2W7_ECTSI5.230e-2530.34Transient Receptor Potential Channel n=1 Tax=Ectoc... [more]
A0A8J5X0G5_DIALT1.420e-1027.60PKD_channel domain-containing protein n=2 Tax=Diac... [more]
A0A6H5JEJ3_9PHAE3.010e-865.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8K1CIA9_PYTOL3.340e-625.33Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.287.70coord: 197..299
e-value: 5.1E-7
score: 31.8
NoneNo IPR availablePANTHERPTHR10877POLYCYSTIN-RELATEDcoord: 117..304
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 189..214
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 165..188
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 279..301
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..129
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..70
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 215..234
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 89..108
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 130..164
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 302..489
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..88
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 235..278
NoneNo IPR availableTMHMMTMhelixcoord: 109..131
NoneNo IPR availableTMHMMTMhelixcoord: 276..298
NoneNo IPR availableTMHMMTMhelixcoord: 215..234
NoneNo IPR availableTMHMMTMhelixcoord: 167..189
NoneNo IPR availableTMHMMTMhelixcoord: 71..88
IPR013122Polycystin cation channel, PKD1/PKD2PFAMPF08016PKD_channelcoord: 16..302
e-value: 7.0E-16
score: 57.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5537contigL-elsbetiae_contig5537:168..7038 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5537.13829.1mRNA_L-elsbetiae_contig5537.13829.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5537 147..7470 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5537.13829.1 ID=prot_L-elsbetiae_contig5537.13829.1|Name=mRNA_L-elsbetiae_contig5537.13829.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=490bp
MLLMDHLDVIPEDEVRSVTVQLVTYNGNQPSAYGTISIDFDFSHGGKVEM
KQLVTAYILKGNIGQADDSRTRWLLGLIFTFMTFAMMWHDTKKWFRARRS
KVKRNCCHCCCGFTFFSLILINILMWLVWAGFGETITFETVVQNDNNNDR
VLKAVTEQLLALQQAAVISAAYDIVFLLTTLTGLYRWIFQMLTFHARMSI
VTDTLSRASTHLDHFLFVFFLVILVFSSLTWLLVGSSTQEFSTLEEAWKS
VTRISLGESENFYPQILAAQPSVGPVVVVLYQVLGIVLLLNVVIAILLEA
YRGVVGGMRGEDTIFQSFIAFVGMTLCSLRTRIRWGNAWIRWRLAGSRSI
APHERQRRPSLKAFLQGSTGIYGVDGRLVVMMRRPHDRLTMEDRQLSFNC
PRYITVTEMQALIQATPVPAAVADRLVRKIVHGWVFRSDEKLPSDFRRSS
PSSSREYGSGNVANLSSGSGSATDSSLRMLRRPSSVAFR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013122PKD1_2_channel