prot_L-elsbetiae_contig5490.13754.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5490.13754.1
Unique Nameprot_L-elsbetiae_contig5490.13754.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1238
Homology
BLAST of mRNA_L-elsbetiae_contig5490.13754.1 vs. uniprot
Match: A0A6H5JIX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIX2_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 5.080e-36
Identity = 431/1433 (30.08%), Postives = 548/1433 (38.24%), Query Frame = 0
Query:    4 GVEAAGAPFCSSALLRPKASPYREKGLQSALETAASGADQPDRSAATTPGDRLSAQLARFGAAGAGSRREGRAXXXXXXXXXXXXXXXAAARRETFQGSRAFSTTDVGVAGVDSARPTLRRVSSAMLASEVVTSSGEGSSGNGTTAELAPAPSPVIVGPKTATSPTVV-----QRNATVPAVESNAASEADRVTESRVVPTLAQDGARKATAAT-------AAAAATAVDEKGGREVWCWQAPLPSRRPRAAEEP-------MSCEREEDGAGENKPGVTAIDERRKVG----VCEGGAKGAAPLPTGAVPVPA--------ELEQARGASLPAAPALAAATEASAAAKEDEKASTAEGVVPAMVP-------SPAVVAEV-----LVDEGGAAMERKLSVFSHFSSALSWRQQPAAATTTTDSTGVSGEGSAPSHAAG----AAFVLDAGPPSALGLDTTGEKSPVAPTGGTKPTTREAADDKPAVSPCAAETKPRDECP------AQES------PDETKGQAARTSGEAREADAATGGPTVARSSGSPPPAGSHSRPSALAAGSRAGLPPEKGRAGPASRAAEQAVVASPSRPRTALTPPGYRSRPSPPHADRTDAPRKEGPVEPTSRGSKXXXXXXXXXXXXXXXXXXXXXXXSPPISAKKLVSXXGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESPSRESLI--------------------------------------------VDAARGGSPSVRGPG----------RVNLTPDRRRVGAPACVRQGGGLDRTPPRCGVSPSRRGFHSPARQPLEEPG--------QEK-----------PRGAVPAAGDEH---GKVEAREKDA-GCSAIAHGGGGGSPKDGVGQQRSFPRFADAHASTQPHCAGVVALPGTSNPAQPXXXXXXXXXXXXXXXXXXXREEVQTKDAACSPMAPGSGLKDAXXXXXXXXXXLDDARASAESRLAVAGGSPG-SGSAAPN---------------------------------GEEKERRAQTKQGTAARSPTSRGGDSPKQGGALEVSTPRFGAANIASTLPATGSAVGVLEGSGVGV-GVGACGPD--------------------------------AAGARTLFSG-GRAAAPASXXXXXXPKDGEEGKGQEQGFPAEFHCSPNFAAGFVAGRRKRRAVSGVPVVXXXXXXXXXFAESPVGQDGGDGRVVSSMLEGAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEAAGEGEGEWAGGSYLDEFNEHPYTGSIVIDPDLVRSGSSSSGGGSTRSSLPRSSFGEVYARSGGRRSWGSKTPSVVTVEMGTQTDDGE-GVKHAVVQAGDGRLLSEAELQDVCNQRELKVR 1231
            GV++ G P  SSALLRP+ASPY++K L SA  +  +  DQ  RS A  PGDRL  QLAR   A AG RREG A               A ARRETFQ SR  STT+  +      RP +RRVSS++ A E          G              ++  +   SPT       Q+ ++  A+E+ A S    +T++ +   LA+  AR A  A          AAA  VD+KG  + W W+A                    +     ++G G N   +T  + + + G    V E    G+ P+P G+  +          ++ +A G  LP     AA     A AKE E    A     A          +PA   +V        E  + +E K SVFS FSS  S R+ P    T  ++ G    G  P+        +                         T        E ++D+   SP A  +K  +E P       +E+      PDE +G           A  AT        S SP P+ S S P +   G  +  P + G  G   +     V ASP R +  LTPP +RSR S P A  TD  RK GP+  TS GSK            XXXXXXX    + P  A ++VS                XXXXXXXXXXXXXXXXX       S  R +                                              VD+ R  S     PG            +LTP R    APA  ++ G L+ TP R     S  G + P +   E  G         EK           P  + P    +    G  E R+ D  GCS +A G G  + + G   Q S PR  DA   T     G V LP  S+P                       +  Q +DA+C PM      + A            DA+A+ ES       SPG S S  P                                  G E+E+ A      AA SP +R   SP   G    +T R  AA+    +    +    ++ SG G  G G    D                                 A    L +G G             P   +EGKG+E+     F CS NFAAGFVAGRRKRRAVSGVPVV          A SPV  +    R  SS   G+K                                  XXXXXXX               EGEG W   SYLDE +EHPY G +VIDPDLVRSG SS      RSS+PRSSF +  ARSGGRRSW +  P   T +M TQT   E GV H +VQAGDG+LLSEAEL++   QREL+ R
Sbjct:  165 GVQSHGTPTRSSALLRPRASPYKDKSLSSAAPSGVT--DQAGRSPAV-PGDRLGGQLARLSTAQAGGRREGPAGG-------------APARRETFQSSRTLSTTESKMGLAVPTRPVIRRVSSSVPADEAAV-------GRRXXXXXXXXXXSGMMDQRGLVSPTAAECNDGQQRSSAVALEAVATSR-PTLTQAFMRQDLAEREARPAACAKLPRGDGKTTAAAARVDDKGTSDPWVWEASPQXXXXXXXXXXXXXXXVVVVASEGDEGVG-NVAALTRRESKPERGCRKSVLEEEGGGSVPMPAGSHSMSVLEKNKQARQMPEATGTYLPTQRGRAATGGTPAVAKEAELVLAATAAADAXXXXXXXXEKTPAKTGQVGREAAKSSEVDSKVEHKSSVFSRFSSVFSRRRHPP---TVAENDGTVARGEVPAVPVATMKESRXXXXXXXXXXXXXXXXXXXXXXLATSAKAEAAXEPSEDRQPASPAAGRSKLVEEGPPAGGGYGEETTVCVPLPDEGEGPEI--------AATATAADLPVSDSSSPAPS-SGSSPLSAERGLVSNAPQDDGPMGSGIQVGR--VAASPGREQPGLTPPRHRSRFSTPPAIITDPARKNGPIGLTSNGSKEVMASPDPPRFAXXXXXXXCRLAAKP-GAGRVVSPLAQGASPQTGVEERKXXXXXXXXXXXXXXXXXRSYSSSPSARRRASSLGQGSITMAGEEGARXXXXXXXXXXXXXXXXXXXXXPSPPLAGRVDSRRRESAPAASPGVRSVLGASDAGGHLTPGRDIAKAPAFEQRTGILEGTPTRRRACSSP-GMYRPGKMRQERLGGRDGVGEETEKVVEGATSPGSLPEPSSPTQQQQERPVGDKEVRKSDNDGCSPVASGDG--NQQGGGVLQSSSPRVVDARP-TNSRPMGGVGLPRVSSPTD---------------------QHQQQEDASCVPMTGDESPRKAVMSRCSSPCTAVDAQAT-ESPATGTVESPGASASHEPRSHQXXXXXXXXXXXXXXXXXXXXXXXXXXXVGQGGEQEQEAPRSCNGAACSPLARTFASPVHDGVPACTTSRLVAASP-PRIAGCSACETAVDDSGRGADGRGGSSCDDXXXXXXXAPVSASDNSXXXXXXXXENEQNLSEASQTPLMTGEGMKKGEKEPEAVQAPPKADEGKGEEE-LHETFPCSTNFAAGFVAGRRKRRAVSGVPVVTVAAATA---ALSPVSAER---RRASS---GSKSPESSLEQEGGLGESSGAESPGDESGSSWETCSSXXXXXXXGVGGAEGE-------EGEG-WGRLSYLDEIDEHPYGGVVVIDPDLVRSGGSSXXXXXARSSIPRSSF-DDEARSGGRRSWTACPP---TADMSTQTTQAEEGVAHILVQAGDGKLLSEAELREEYTQRELRER 1508          
BLAST of mRNA_L-elsbetiae_contig5490.13754.1 vs. uniprot
Match: D7FZK0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZK0_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 2.070e-31
Identity = 160/237 (67.51%), Postives = 172/237 (72.57%), Query Frame = 0
Query:  996 PAEFHCSPNFAAGFVAGRRKRRAVSGVPVVXXXXXXXXXFAESPVGQDGGDGRVVSSMLEGAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEAAGEGEGEWAGGSYLDEFNEHPYTGSIVIDPDLVRSGSSSSGGGSTRSSLPRSSFGEVYARSGGRRSWGSKTPSVVTVEMGTQTDDGE-GVKHAVVQAGDGRLLSEAELQDVCNQRELKVR 1231
            P  F CSPNFAAGFVAGRRKRRAVSGVPVVXXXXXXXXX                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +E   EGEG W   SYLDE +EHPY G +VIDPDLVRSG SS+G  S RSS+PRSS  +  ARSGGRRSW +  P   T EM TQT  GE GV H +VQAGDG+LLSEAEL++   QREL+ R
Sbjct:  794 PETFPCSPNFAAGFVAGRRKRRAVSGVPVVXXXXXXXXXXXXX--------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVVEEEGEEGEG-WGRLSYLDEIDEHPYGGVVVIDPDLVRSGGSSNGXXSARSSIPRSSV-DDEARSGGRRSWTASPP---TAEMSTQTTQGEEGVAHVLVQAGDGKLLSEAELREEYTQRELRER 1011          
BLAST of mRNA_L-elsbetiae_contig5490.13754.1 vs. uniprot
Match: D7FNX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX0_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 1.320e-24
Identity = 64/106 (60.38%), Postives = 76/106 (71.70%), Query Frame = 0
Query: 1130 NEHPYTGSIVIDPDLVRSGSSSSGGGSTRSSLPRSSFGEVYARSGGRRSWGSKTPSVVTVEMGTQTDDGE-GVKHAVVQAGDGRLLSEAELQDVCNQRELKVREGL 1234
            +EHPY G +VIDPDLVRSG SS+   S RSS+PRSS  +  ARSGGRRSW +  P   T EM TQT  GE GV H +VQAGDG+LLSEAEL++   QREL+ R  +
Sbjct:    6 DEHPYGGVVVIDPDLVRSGGSSNXXXSARSSIPRSSV-DDEARSGGRRSWTASPP---TAEMSTQTTQGEEGVAHVLVQAGDGKLLSEAELREEYTQRELRQRSNM 107          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5490.13754.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JIX2_9PHAE5.080e-3630.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZK0_ECTSI2.070e-3167.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FNX0_ECTSI1.320e-2460.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5490contigL-elsbetiae_contig5490:6627..12461 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5490.13754.1mRNA_L-elsbetiae_contig5490.13754.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5490 6627..12461 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5490.13754.1 ID=prot_L-elsbetiae_contig5490.13754.1|Name=mRNA_L-elsbetiae_contig5490.13754.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1238bp
GTGGVEAAGAPFCSSALLRPKASPYREKGLQSALETAASGADQPDRSAAT
TPGDRLSAQLARFGAAGAGSRREGRAEGGGRGSGAGGGAVGAAARRETFQ
GSRAFSTTDVGVAGVDSARPTLRRVSSAMLASEVVTSSGEGSSGNGTTAE
LAPAPSPVIVGPKTATSPTVVQRNATVPAVESNAASEADRVTESRVVPTL
AQDGARKATAATAAAAATAVDEKGGREVWCWQAPLPSRRPRAAEEPMSCE
REEDGAGENKPGVTAIDERRKVGVCEGGAKGAAPLPTGAVPVPAELEQAR
GASLPAAPALAAATEASAAAKEDEKASTAEGVVPAMVPSPAVVAEVLVDE
GGAAMERKLSVFSHFSSALSWRQQPAAATTTTDSTGVSGEGSAPSHAAGA
AFVLDAGPPSALGLDTTGEKSPVAPTGGTKPTTREAADDKPAVSPCAAET
KPRDECPAQESPDETKGQAARTSGEAREADAATGGPTVARSSGSPPPAGS
HSRPSALAAGSRAGLPPEKGRAGPASRAAEQAVVASPSRPRTALTPPGYR
SRPSPPHADRTDAPRKEGPVEPTSRGSKEAATPSPPGRRRAGLTPPGYLS
HSPPISAKKLVSPRGHGGKENEANSPAAARSSGLTPPGYRSRLSSPSAGR
VESPSRESLIVDAARGGSPSVRGPGRVNLTPDRRRVGAPACVRQGGGLDR
TPPRCGVSPSRRGFHSPARQPLEEPGQEKPRGAVPAAGDEHGKVEAREKD
AGCSAIAHGGGGGSPKDGVGQQRSFPRFADAHASTQPHCAGVVALPGTSN
PAQPQPQPQPQQQQHQHGVQEKEREEVQTKDAACSPMAPGSGLKDAAGLP
RASTPGLDDARASAESRLAVAGGSPGSGSAAPNGEEKERRAQTKQGTAAR
SPTSRGGDSPKQGGALEVSTPRFGAANIASTLPATGSAVGVLEGSGVGVG
VGACGPDAAGARTLFSGGRAAAPASPPSSPPPKDGEEGKGQEQGFPAEFH
CSPNFAAGFVAGRRKRRAVSGVPVVTAAAAAAAAFAESPVGQDGGDGRVV
SSMLEGAKRSQEEQKGGAGAEAEEEQEGDEESSSGESGSSWETCSSSEEE
QEDEEGGGGKEAAGEGEGEWAGGSYLDEFNEHPYTGSIVIDPDLVRSGSS
SSGGGSTRSSLPRSSFGEVYARSGGRRSWGSKTPSVVTVEMGTQTDDGEG
VKHAVVQAGDGRLLSEAELQDVCNQRELKVREGLHAG*
back to top